RNA–Protein interactions for RNA: ENST00000474272.1

TMEM50B-208, Transcript of transmembrane protein 50B, humanhuman

TSL 3

Gene TMEM50B, Length 518 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-208ENST00000474272 PGLYRP4Q96LB8 373 aa2.4□□□□□ -2.03
TMEM50B-208ENST00000474272 IMMP1LQ96LU5 166 aa2.4□□□□□ -2.03
TMEM50B-208ENST00000474272 GAL3ST1Q99999 423 aa2.4□□□□□ -2.03
TMEM50B-208ENST00000474272 FRMD8P1Q9BZ68 369 aaPredicted RBP2.4□□□□□ -2.03
TMEM50B-208ENST00000474272 MAGT1Q9H0U3 335 aa2.4□□□□□ -2.03
TMEM50B-208ENST00000474272 LRRN3Q9H3W5 708 aa2.4□□□□□ -2.03
TMEM50B-208ENST00000474272 SMYD3Q9H7B4 428 aa2.4□□□□□ -2.03
TMEM50B-208ENST00000474272 GORASP2Q9H8Y8 452 aa2.4□□□□□ -2.03
TMEM50B-208ENST00000474272 PARVGQ9HBI0 331 aa2.4□□□□□ -2.03
TMEM50B-208ENST00000474272 SAR1AQ9NR31 198 aa2.4□□□□□ -2.03
TMEM50B-208ENST00000474272 SUN2Q9UH99 717 aa2.4□□□□□ -2.03
TMEM50B-208ENST00000474272 LGALS13Q9UHV8 139 aa2.4□□□□□ -2.03
TMEM50B-208ENST00000474272 DNAJC12Q9UKB3 198 aa2.4□□□□□ -2.03
TMEM50B-208ENST00000474272 TMCC3Q9ULS5 477 aa2.4□□□□□ -2.03
TMEM50B-208ENST00000474272 ARL2BPQ9Y2Y0 163 aa2.4□□□□□ -2.03
TMEM50B-208ENST00000474272 IFT52Q9Y366 437 aa2.4□□□□□ -2.03
TMEM50B-208ENST00000474272 SBDSQ9Y3A5 250 aaKnown RBP eCLIP2.4□□□□□ -2.03
TMEM50B-208ENST00000474272 UGT2A1Q9Y4X1 527 aa2.4□□□□□ -2.03
TMEM50B-208ENST00000474272 RGPD2P0DJD1 1756 aa2.4□□□□□ -2.03
TMEM50B-208ENST00000474272 CASZ1Q86V15 1759 aa2.4□□□□□ -2.03
TMEM50B-208ENST00000474272 DUOX1Q9NRD9 1551 aa2.4□□□□□ -2.03
TMEM50B-208ENST00000474272 BCORQ6W2J9 1755 aa2.39□□□□□ -2.03
TMEM50B-208ENST00000474272 RREB1Q92766 1687 aa2.39□□□□□ -2.03
TMEM50B-208ENST00000474272 IGKV1D-8A0A087WSZ0 117 aa2.39□□□□□ -2.03
TMEM50B-208ENST00000474272 A0A0J9YXY3 114 aa2.39□□□□□ -2.03
TMEM50B-208ENST00000474272 TMEM110-MUSTN1A8MSY1 372 aa2.39□□□□□ -2.03
TMEM50B-208ENST00000474272 ANKRD65E5RJM6 399 aa2.39□□□□□ -2.03
TMEM50B-208ENST00000474272 F5H6K3 240 aa2.39□□□□□ -2.03
TMEM50B-208ENST00000474272 H0Y9J4 135 aa2.39□□□□□ -2.03
TMEM50B-208ENST00000474272 ZNF861PO60384 105 aa2.39□□□□□ -2.03
TMEM50B-208ENST00000474272 CDH16O75309 829 aa2.39□□□□□ -2.03
TMEM50B-208ENST00000474272 MTX2O75431 263 aa2.39□□□□□ -2.03
TMEM50B-208ENST00000474272 MMP23AO75900 390 aa2.39□□□□□ -2.03
TMEM50B-208ENST00000474272 TTC4O95801 387 aa2.39□□□□□ -2.03
TMEM50B-208ENST00000474272 ACTL6AO96019 429 aa2.39□□□□□ -2.03
TMEM50B-208ENST00000474272 IL1BP01584 269 aa2.39□□□□□ -2.03
TMEM50B-208ENST00000474272 LGALS2P05162 132 aa2.39□□□□□ -2.03
TMEM50B-208ENST00000474272 NQO1P15559 274 aaKnown RBP2.39□□□□□ -2.03
TMEM50B-208ENST00000474272 ZNF44P15621 663 aa2.39□□□□□ -2.03
TMEM50B-208ENST00000474272 NPR2P20594 1047 aa2.39□□□□□ -2.03
TMEM50B-208ENST00000474272 FUT3P21217 361 aa2.39□□□□□ -2.03
TMEM50B-208ENST00000474272 GLRA2P23416 452 aa2.39□□□□□ -2.03
TMEM50B-208ENST00000474272 CCNCP24863 283 aa2.39□□□□□ -2.03
TMEM50B-208ENST00000474272 IVDP26440 423 aa2.39□□□□□ -2.03
TMEM50B-208ENST00000474272 ALDH3A1P30838 453 aa2.39□□□□□ -2.03
TMEM50B-208ENST00000474272 RFC4P35249 363 aa2.39□□□□□ -2.03
TMEM50B-208ENST00000474272 MAP3K8P41279 467 aa2.39□□□□□ -2.03
TMEM50B-208ENST00000474272 PSMD7P51665 324 aa2.39□□□□□ -2.03
TMEM50B-208ENST00000474272 GBX2P52951 348 aaPredicted RBP2.39□□□□□ -2.03
TMEM50B-208ENST00000474272 PLK1P53350 603 aa2.39□□□□□ -2.03
TMEM50B-208ENST00000474272 PLTPP55058 493 aa2.39□□□□□ -2.03
TMEM50B-208ENST00000474272 SPIBQ01892 262 aa2.39□□□□□ -2.03
TMEM50B-208ENST00000474272 IL24Q13007 206 aa2.39□□□□□ -2.03
TMEM50B-208ENST00000474272 GPM6BQ13491 265 aa2.39□□□□□ -2.03
TMEM50B-208ENST00000474272 PPP1R7Q15435 360 aa2.39□□□□□ -2.03
TMEM50B-208ENST00000474272 NSUN5P1Q3KNT7 163 aa2.39□□□□□ -2.03
TMEM50B-208ENST00000474272 OTPQ5XKR4 325 aa2.39□□□□□ -2.03
TMEM50B-208ENST00000474272 APOBEC3HQ6NTF7 200 aaKnown RBP2.39□□□□□ -2.03
TMEM50B-208ENST00000474272 IGFL3Q6UXB1 125 aa2.39□□□□□ -2.03
TMEM50B-208ENST00000474272 ACOT7LQ6ZUV0 252 aa2.39□□□□□ -2.03
TMEM50B-208ENST00000474272 TMEM179Q6ZVK1 233 aa2.39□□□□□ -2.03
TMEM50B-208ENST00000474272 TMEM110Q86TL2 294 aa2.39□□□□□ -2.03
TMEM50B-208ENST00000474272 VRK2Q86Y07 508 aa2.39□□□□□ -2.03
TMEM50B-208ENST00000474272 SLC13A5Q86YT5 568 aaPredicted RBP2.39□□□□□ -2.03
TMEM50B-208ENST00000474272 NELFCDQ8IXH7 590 aa2.39□□□□□ -2.03
TMEM50B-208ENST00000474272 SLC35F2Q8IXU6 374 aa2.39□□□□□ -2.03
TMEM50B-208ENST00000474272 FAM71AQ8IYT1 594 aa2.39□□□□□ -2.03
TMEM50B-208ENST00000474272 LRRC34Q8IZ02 419 aa2.39□□□□□ -2.03
TMEM50B-208ENST00000474272 OR2AP1Q8NGE2 309 aa2.39□□□□□ -2.03
TMEM50B-208ENST00000474272 ANKRD49Q8WVL7 239 aa2.39□□□□□ -2.03
TMEM50B-208ENST00000474272 COQ2Q96H96 371 aa2.39□□□□□ -2.03
TMEM50B-208ENST00000474272 ZNF285Q96NJ3 590 aa2.39□□□□□ -2.03
TMEM50B-208ENST00000474272 ARHGDIGQ99819 225 aa2.39□□□□□ -2.03
TMEM50B-208ENST00000474272 NEUROG2Q9H2A3 272 aa2.39□□□□□ -2.03
TMEM50B-208ENST00000474272 ZDHHC11Q9H8X9 412 aa2.39□□□□□ -2.03
TMEM50B-208ENST00000474272 MRPL47Q9HD33 250 aaKnown RBP2.39□□□□□ -2.03
TMEM50B-208ENST00000474272 APMAPQ9HDC9 416 aa2.39□□□□□ -2.03
TMEM50B-208ENST00000474272 AGPAT3Q9NRZ7 376 aa2.39□□□□□ -2.03
TMEM50B-208ENST00000474272 RABL2BQ9UNT1 228 aa2.39□□□□□ -2.03
TMEM50B-208ENST00000474272 SNX24Q9Y343 169 aa2.39□□□□□ -2.03
TMEM50B-208ENST00000474272 USH1CQ9Y6N9 552 aa2.39□□□□□ -2.03
TMEM50B-208ENST00000474272 AFDNP55196 1824 aaKnown RBP2.39□□□□□ -2.03
TMEM50B-208ENST00000474272 IGLV3-22A0A075B6J6 115 aa2.38□□□□□ -2.03
TMEM50B-208ENST00000474272 PSMB11A5LHX3 300 aa2.38□□□□□ -2.03
TMEM50B-208ENST00000474272 FAM47DPA6NHR8 397 aa2.38□□□□□ -2.03
TMEM50B-208ENST00000474272 GPR89AB7ZAQ6 455 aa2.38□□□□□ -2.03
TMEM50B-208ENST00000474272 PANO1I0J062 215 aa2.38□□□□□ -2.03
TMEM50B-208ENST00000474272 DCTN6O00399 190 aa2.38□□□□□ -2.03
TMEM50B-208ENST00000474272 ZNF780AO75290 641 aaPredicted RBP2.38□□□□□ -2.03
TMEM50B-208ENST00000474272 SNNO75324 88 aaPredicted RBP2.38□□□□□ -2.03
TMEM50B-208ENST00000474272 DCTN3O75935 186 aa2.38□□□□□ -2.03
TMEM50B-208ENST00000474272 RHOBTB1O94844 696 aa2.38□□□□□ -2.03
TMEM50B-208ENST00000474272 STAMBPO95630 424 aa2.38□□□□□ -2.03
TMEM50B-208ENST00000474272 LGI1O95970 557 aa2.38□□□□□ -2.03
TMEM50B-208ENST00000474272 SHBGP04278 402 aa2.38□□□□□ -2.03
TMEM50B-208ENST00000474272 POLR2MP0CAP2 368 aa2.38□□□□□ -2.03
TMEM50B-208ENST00000474272 GPR89BP0CG08 455 aa2.38□□□□□ -2.03
TMEM50B-208ENST00000474272 COX5AP20674 150 aa2.38□□□□□ -2.03
TMEM50B-208ENST00000474272 GCAP28676 217 aa2.38□□□□□ -2.03
TMEM50B-208ENST00000474272 EFNB2P52799 333 aa2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms