RNA–Protein interactions for RNA: ENST00000474048.1

PRPF38A-202, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 1 (best)

Gene PRPF38A, Length 1,059 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-202ENST00000474048 PYCR1P32322 319 aa9.14□□□□□ -0.95
PRPF38A-202ENST00000474048 P2RY4P51582 365 aa9.14□□□□□ -0.95
PRPF38A-202ENST00000474048 TUBA4AP68366 448 aa9.14□□□□□ -0.95
PRPF38A-202ENST00000474048 ST3GAL2Q16842 350 aa9.14□□□□□ -0.95
PRPF38A-202ENST00000474048 C1orf185Q5T7R7 199 aa9.14□□□□□ -0.95
PRPF38A-202ENST00000474048 TMPRSS11AQ6ZMR5 421 aa9.14□□□□□ -0.95
PRPF38A-202ENST00000474048 ZSCAN2Q7Z7L9 614 aaPredicted RBP9.14□□□□□ -0.95
PRPF38A-202ENST00000474048 ERI1Q8IV48 349 aaKnown RBP9.14□□□□□ -0.95
PRPF38A-202ENST00000474048 OR10H4Q8NGA5 316 aa9.14□□□□□ -0.95
PRPF38A-202ENST00000474048 OR51L1Q8NGJ5 315 aa9.14□□□□□ -0.95
PRPF38A-202ENST00000474048 OR6N2Q8NGY6 317 aa9.14□□□□□ -0.95
PRPF38A-202ENST00000474048 NSMAFQ92636 917 aa9.14□□□□□ -0.95
PRPF38A-202ENST00000474048 FCGR1BQ92637 280 aa9.14□□□□□ -0.95
PRPF38A-202ENST00000474048 GGHQ92820 318 aa9.14□□□□□ -0.95
PRPF38A-202ENST00000474048 WNT2BQ93097 391 aa9.14□□□□□ -0.95
PRPF38A-202ENST00000474048 TMEM45BQ96B21 275 aa9.14□□□□□ -0.95
PRPF38A-202ENST00000474048 APH1AQ96BI3 265 aa9.14□□□□□ -0.95
PRPF38A-202ENST00000474048 ZMYND19Q96E35 227 aaPredicted RBP9.14□□□□□ -0.95
PRPF38A-202ENST00000474048 GMPPAQ96IJ6 420 aaPredicted RBP9.14□□□□□ -0.95
PRPF38A-202ENST00000474048 OR2M2Q96R28 347 aa9.14□□□□□ -0.95
PRPF38A-202ENST00000474048 INTS14Q96SY0 518 aa9.14□□□□□ -0.95
PRPF38A-202ENST00000474048 KCNK17Q96T54 332 aa9.14□□□□□ -0.95
PRPF38A-202ENST00000474048 TEAD3Q99594 435 aa9.14□□□□□ -0.95
PRPF38A-202ENST00000474048 MND1Q9BWT6 205 aa9.14□□□□□ -0.95
PRPF38A-202ENST00000474048 NUAK2Q9H093 628 aa9.14□□□□□ -0.95
PRPF38A-202ENST00000474048 RACGAP1Q9H0H5 632 aa9.14□□□□□ -0.95
PRPF38A-202ENST00000474048 KCNN2Q9H2S1 579 aa9.14□□□□□ -0.95
PRPF38A-202ENST00000474048 TP63Q9H3D4 680 aaPredicted RBP9.14□□□□□ -0.95
PRPF38A-202ENST00000474048 SEC61A2Q9H9S3 476 aa9.14□□□□□ -0.95
PRPF38A-202ENST00000474048 RNF122Q9H9V4 155 aa9.14□□□□□ -0.95
PRPF38A-202ENST00000474048 INPP5EQ9NRR6 644 aa9.14□□□□□ -0.95
PRPF38A-202ENST00000474048 GLTPQ9NZD2 209 aa9.14□□□□□ -0.95
PRPF38A-202ENST00000474048 TMEM14AQ9Y6G1 99 aa9.14□□□□□ -0.95
PRPF38A-202ENST00000474048 CACNA1AO00555 2505 aa9.14□□□□□ -0.95
PRPF38A-202ENST00000474048 FREM2Q5SZK8 3169 aa9.14□□□□□ -0.95
PRPF38A-202ENST00000474048 IGF2RP11717 2491 aa9.13□□□□□ -0.95
PRPF38A-202ENST00000474048 IGKV3D-15A0A087WSY6 115 aa9.13□□□□□ -0.95
PRPF38A-202ENST00000474048 ZNF716A6NP11 495 aa9.13□□□□□ -0.95
PRPF38A-202ENST00000474048 FAM171A2A8MVW0 826 aa9.13□□□□□ -0.95
PRPF38A-202ENST00000474048 ZNF587BE7ETH6 402 aa9.13□□□□□ -0.95
PRPF38A-202ENST00000474048 APOL3O95236 402 aa9.13□□□□□ -0.95
PRPF38A-202ENST00000474048 IL2RAP01589 272 aa9.13□□□□□ -0.95
PRPF38A-202ENST00000474048 STSP08842 583 aa9.13□□□□□ -0.95
PRPF38A-202ENST00000474048 QDPRP09417 244 aa9.13□□□□□ -0.95
PRPF38A-202ENST00000474048 CLUP10909 449 aa9.13□□□□□ -0.95
PRPF38A-202ENST00000474048 EDN3P14138 238 aa9.13□□□□□ -0.95
PRPF38A-202ENST00000474048 NAA10P41227 235 aaPredicted RBP9.13□□□□□ -0.95
PRPF38A-202ENST00000474048 NR1H2P55055 460 aa9.13□□□□□ -0.95
PRPF38A-202ENST00000474048 CDH15P55291 814 aa9.13□□□□□ -0.95
PRPF38A-202ENST00000474048 ACTA2P62736 377 aa9.13□□□□□ -0.95
PRPF38A-202ENST00000474048 ACTG2P63267 376 aa9.13□□□□□ -0.95
PRPF38A-202ENST00000474048 ADAM8P78325 824 aa9.13□□□□□ -0.95
PRPF38A-202ENST00000474048 SLC35A2P78381 396 aa9.13□□□□□ -0.95
PRPF38A-202ENST00000474048 EFNB1P98172 346 aa9.13□□□□□ -0.95
PRPF38A-202ENST00000474048 LY6DQ14210 128 aa9.13□□□□□ -0.95
PRPF38A-202ENST00000474048 NEDD8Q15843 81 aa9.13□□□□□ -0.95
PRPF38A-202ENST00000474048 ACSF3Q4G176 576 aaPredicted RBP9.13□□□□□ -0.95
PRPF38A-202ENST00000474048 FAM220AQ7Z4H9 259 aa9.13□□□□□ -0.95
PRPF38A-202ENST00000474048 GLB1L2Q8IW92 636 aa9.13□□□□□ -0.95
PRPF38A-202ENST00000474048 SLC35F2Q8IXU6 374 aa9.13□□□□□ -0.95
PRPF38A-202ENST00000474048 KLHL36Q8N4N3 616 aa9.13□□□□□ -0.95
PRPF38A-202ENST00000474048 ACBD7Q8N6N7 88 aa9.13□□□□□ -0.95
PRPF38A-202ENST00000474048 CNEP1R1Q8N9A8 125 aa9.13□□□□□ -0.95
PRPF38A-202ENST00000474048 OR2AJ1Q8NGZ0 328 aa9.13□□□□□ -0.95
PRPF38A-202ENST00000474048 FAM57AQ8TBR7 257 aa9.13□□□□□ -0.95
PRPF38A-202ENST00000474048 RORBQ92753 470 aa9.13□□□□□ -0.95
PRPF38A-202ENST00000474048 ZNF775Q96BV0 537 aaPredicted RBP9.13□□□□□ -0.95
PRPF38A-202ENST00000474048 SNRNP40Q96DI7 357 aaKnown RBP9.13□□□□□ -0.95
PRPF38A-202ENST00000474048 LGALS12Q96DT0 336 aa9.13□□□□□ -0.95
PRPF38A-202ENST00000474048 ZFP3Q96NJ6 502 aa9.13□□□□□ -0.95
PRPF38A-202ENST00000474048 ZNF385AQ96PM9 386 aaKnown RBP9.13□□□□□ -0.95
PRPF38A-202ENST00000474048 MNTQ99583 582 aa9.13□□□□□ -0.95
PRPF38A-202ENST00000474048 RBM24Q9BX46 236 aaKnown RBP9.13□□□□□ -0.95
PRPF38A-202ENST00000474048 SLCO5A1Q9H2Y9 848 aa9.13□□□□□ -0.95
PRPF38A-202ENST00000474048 ASF1BQ9NVP2 202 aa9.13□□□□□ -0.95
PRPF38A-202ENST00000474048 ERVK-18Q9QC07 812 aa9.13□□□□□ -0.95
PRPF38A-202ENST00000474048 LAMP5Q9UJQ1 280 aa9.13□□□□□ -0.95
PRPF38A-202ENST00000474048 CLEC4AQ9UMR7 237 aa9.13□□□□□ -0.95
PRPF38A-202ENST00000474048 DIMT1Q9UNQ2 313 aaKnown RBP9.13□□□□□ -0.95
PRPF38A-202ENST00000474048 B9D1Q9UPM9 204 aa9.13□□□□□ -0.95
PRPF38A-202ENST00000474048 DNAJC13O75165 2243 aa9.13□□□□□ -0.95
PRPF38A-202ENST00000474048 ZNF407Q9C0G0 2248 aa9.13□□□□□ -0.95
PRPF38A-202ENST00000474048 MED12Q93074 2177 aa9.12□□□□□ -0.95
PRPF38A-202ENST00000474048 CD8B2A6NJW9 211 aa9.12□□□□□ -0.95
PRPF38A-202ENST00000474048 C12orf71A8MTZ7 269 aa9.12□□□□□ -0.95
PRPF38A-202ENST00000474048 AQP8O94778 261 aa9.12□□□□□ -0.95
PRPF38A-202ENST00000474048 FARS2O95363 451 aaKnown RBP9.12□□□□□ -0.95
PRPF38A-202ENST00000474048 MT-ND2P03891 347 aa9.12□□□□□ -0.95
PRPF38A-202ENST00000474048 SPARCP09486 303 aa9.12□□□□□ -0.95
PRPF38A-202ENST00000474048 KLK2P20151 261 aa9.12□□□□□ -0.95
PRPF38A-202ENST00000474048 SLC2A5P22732 501 aa9.12□□□□□ -0.95
PRPF38A-202ENST00000474048 LAP3P28838 519 aa9.12□□□□□ -0.95
PRPF38A-202ENST00000474048 CAPZA2P47755 286 aa9.12□□□□□ -0.95
PRPF38A-202ENST00000474048 SELENOPP49908 381 aa9.12□□□□□ -0.95
PRPF38A-202ENST00000474048 SIRPAP78324 504 aa9.12□□□□□ -0.95
PRPF38A-202ENST00000474048 HSF2Q03933 536 aa9.12□□□□□ -0.95
PRPF38A-202ENST00000474048 FMODQ06828 376 aa9.12□□□□□ -0.95
PRPF38A-202ENST00000474048 MED22Q15528 200 aa9.12□□□□□ -0.95
PRPF38A-202ENST00000474048 NSUN5P2Q63ZY6 315 aa9.12□□□□□ -0.95
PRPF38A-202ENST00000474048 ZNF544Q6NX49 715 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms