RNA–Protein interactions for RNA: ENST00000473417.5

SNX4-204, Transcript of sorting nexin 4, humanhuman

TSL 3

Gene SNX4, Length 754 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-204ENST00000473417 OR10H3O60404 316 aa15.77■□□□□ 0.12
SNX4-204ENST00000473417 KRT36O76013 467 aa15.77■□□□□ 0.12
SNX4-204ENST00000473417 RAP2AP10114 183 aa15.77■□□□□ 0.12
SNX4-204ENST00000473417 CDKN1AP38936 164 aa15.77■□□□□ 0.12
SNX4-204ENST00000473417 LIMS1P48059 325 aa15.77■□□□□ 0.12
SNX4-204ENST00000473417 CSNK1A1P48729 337 aa15.77■□□□□ 0.12
SNX4-204ENST00000473417 CDH11P55287 796 aa15.77■□□□□ 0.12
SNX4-204ENST00000473417 ARF1P84077 181 aaKnown RBP15.77■□□□□ 0.12
SNX4-204ENST00000473417 TOP3AQ13472 1001 aaPredicted RBP15.77■□□□□ 0.12
SNX4-204ENST00000473417 FHL1Q13642 323 aa15.77■□□□□ 0.12
SNX4-204ENST00000473417 ETFDHQ16134 617 aa15.77■□□□□ 0.12
SNX4-204ENST00000473417 ZBED5Q49AG3 693 aa15.77■□□□□ 0.12
SNX4-204ENST00000473417 HIKESHIQ53FT3 197 aa15.77■□□□□ 0.12
SNX4-204ENST00000473417 CCDC121Q6ZUS5 278 aa15.77■□□□□ 0.12
SNX4-204ENST00000473417 DTX2Q86UW9 622 aa15.77■□□□□ 0.12
SNX4-204ENST00000473417 WDR31Q8NA23 367 aa15.77■□□□□ 0.12
SNX4-204ENST00000473417 LRRC75AQ8NAA5 344 aa15.77■□□□□ 0.12
SNX4-204ENST00000473417 C1orf162Q8NEQ5 155 aaPredicted RBP15.77■□□□□ 0.12
SNX4-204ENST00000473417 OR1K1Q8NGR3 316 aa15.77■□□□□ 0.12
SNX4-204ENST00000473417 ZNF566Q969W8 418 aa15.77■□□□□ 0.12
SNX4-204ENST00000473417 SLC25A44Q96H78 314 aaPredicted RBP15.77■□□□□ 0.12
SNX4-204ENST00000473417 LRR1Q96L50 414 aa15.77■□□□□ 0.12
SNX4-204ENST00000473417 TRAF4Q9BUZ4 470 aaPredicted RBP15.77■□□□□ 0.12
SNX4-204ENST00000473417 CHID1Q9BWS9 393 aa15.77■□□□□ 0.12
SNX4-204ENST00000473417 ULBP2Q9BZM5 246 aa15.77■□□□□ 0.12
SNX4-204ENST00000473417 GRIP2Q9C0E4 1043 aa15.77■□□□□ 0.12
SNX4-204ENST00000473417 B3GAT2Q9NPZ5 323 aa15.77■□□□□ 0.12
SNX4-204ENST00000473417 CISD1Q9NZ45 108 aaKnown RBP15.77■□□□□ 0.12
SNX4-204ENST00000473417 A0A096LPE4 126 aa15.76■□□□□ 0.11
SNX4-204ENST00000473417 A0A1W2PPZ6 126 aa15.76■□□□□ 0.11
SNX4-204ENST00000473417 RPL36A-HNRNPH2H7BZ11 118 aa15.76■□□□□ 0.11
SNX4-204ENST00000473417 CD8AP01732 235 aa15.76■□□□□ 0.11
SNX4-204ENST00000473417 DAP3P51398 398 aaKnown RBP15.76■□□□□ 0.11
SNX4-204ENST00000473417 CTXN1P60606 82 aa15.76■□□□□ 0.11
SNX4-204ENST00000473417 RUNX1T1Q06455 604 aa15.76■□□□□ 0.11
SNX4-204ENST00000473417 PPP1R8Q12972 351 aaKnown RBP15.76■□□□□ 0.11
SNX4-204ENST00000473417 ANKDD1AQ495B1 522 aa15.76■□□□□ 0.11
SNX4-204ENST00000473417 TMEM108Q6UXF1 575 aa15.76■□□□□ 0.11
SNX4-204ENST00000473417 ZER1Q7Z7L7 766 aa15.76■□□□□ 0.11
SNX4-204ENST00000473417 ASB10Q8WXI3 467 aa15.76■□□□□ 0.11
SNX4-204ENST00000473417 GTPBP3Q969Y2 492 aaKnown RBP15.76■□□□□ 0.11
SNX4-204ENST00000473417 RADILQ96JH8 1075 aa15.76■□□□□ 0.11
SNX4-204ENST00000473417 GPA33Q99795 319 aa15.76■□□□□ 0.11
SNX4-204ENST00000473417 C1QTNF6Q9BXI9 259 aa15.76■□□□□ 0.11
SNX4-204ENST00000473417 SLC17A5Q9NRA2 495 aa15.76■□□□□ 0.11
SNX4-204ENST00000473417 GLTPQ9NZD2 209 aa15.76■□□□□ 0.11
SNX4-204ENST00000473417 MGAT4BQ9UQ53 548 aa15.76■□□□□ 0.11
SNX4-204ENST00000473417 LYVE1Q9Y5Y7 322 aa15.76■□□□□ 0.11
SNX4-204ENST00000473417 UNC119BA6NIH7 251 aa15.75■□□□□ 0.11
SNX4-204ENST00000473417 EBAG9O00559 213 aa15.75■□□□□ 0.11
SNX4-204ENST00000473417 SEC14L2O76054 403 aa15.75■□□□□ 0.11
SNX4-204ENST00000473417 IGHG1P01857 330 aa15.75■□□□□ 0.11
SNX4-204ENST00000473417 PGA4P0DJD7 388 aa15.75■□□□□ 0.11
SNX4-204ENST00000473417 PGA3P0DJD8 388 aa15.75■□□□□ 0.11
SNX4-204ENST00000473417 ZNF26P17031 533 aaPredicted RBP15.75■□□□□ 0.11
SNX4-204ENST00000473417 PTAFRP25105 342 aa15.75■□□□□ 0.11
SNX4-204ENST00000473417 RPL4P36578 427 aaKnown RBP15.75■□□□□ 0.11
SNX4-204ENST00000473417 ZNF83P51522 516 aa15.75■□□□□ 0.11
SNX4-204ENST00000473417 HMGA2P52926 109 aa15.75■□□□□ 0.11
SNX4-204ENST00000473417 PRPS1P60891 318 aa15.75■□□□□ 0.11
SNX4-204ENST00000473417 SPOCK1Q08629 439 aa15.75■□□□□ 0.11
SNX4-204ENST00000473417 TNK1Q13470 666 aa15.75■□□□□ 0.11
SNX4-204ENST00000473417 CLEC12BQ2HXU8 276 aa15.75■□□□□ 0.11
SNX4-204ENST00000473417 TBRG1Q3YBR2 411 aa15.75■□□□□ 0.11
SNX4-204ENST00000473417 ARMC4Q5T2S8 1044 aa15.75■□□□□ 0.11
SNX4-204ENST00000473417 OR2T5Q6IEZ7 315 aa15.75■□□□□ 0.11
SNX4-204ENST00000473417 C17orf78Q8N4C9 275 aa15.75■□□□□ 0.11
SNX4-204ENST00000473417 OR2T29Q8NH02 315 aa15.75■□□□□ 0.11
SNX4-204ENST00000473417 BCL2L2Q92843 193 aaPredicted RBP15.75■□□□□ 0.11
SNX4-204ENST00000473417 TMEM54Q969K7 222 aa15.75■□□□□ 0.11
SNX4-204ENST00000473417 RSRC1Q96IZ7 334 aaKnown RBP15.75■□□□□ 0.11
SNX4-204ENST00000473417 MMADHCQ9H3L0 296 aaPredicted RBP15.75■□□□□ 0.11
SNX4-204ENST00000473417 TXNIPQ9H3M7 391 aa15.75■□□□□ 0.11
SNX4-204ENST00000473417 FAIMQ9NVQ4 179 aa15.75■□□□□ 0.11
SNX4-204ENST00000473417 VNN3Q9NY84 501 aa15.75■□□□□ 0.11
SNX4-204ENST00000473417 ZNF346Q9UL40 294 aaKnown RBP15.75■□□□□ 0.11
SNX4-204ENST00000473417 SIGLEC7Q9Y286 467 aa15.75■□□□□ 0.11
SNX4-204ENST00000473417 U3KQV3 271 aa15.75■□□□□ 0.11
SNX4-204ENST00000473417 CHD3Q12873 2000 aaKnown RBP15.74■□□□□ 0.11
SNX4-204ENST00000473417 TCRBV3S1A0A5B6 114 aa15.74■□□□□ 0.11
SNX4-204ENST00000473417 PTP4A3O75365 173 aa15.74■□□□□ 0.11
SNX4-204ENST00000473417 TRMUO75648 421 aaKnown RBP15.74■□□□□ 0.11
SNX4-204ENST00000473417 IGHV4-39P01824 125 aa15.74■□□□□ 0.11
SNX4-204ENST00000473417 ACADSP16219 412 aa15.74■□□□□ 0.11
SNX4-204ENST00000473417 CD40P25942 277 aa15.74■□□□□ 0.11
SNX4-204ENST00000473417 IFNGR2P38484 337 aa15.74■□□□□ 0.11
SNX4-204ENST00000473417 SH3BGRP55822 239 aaPredicted RBP15.74■□□□□ 0.11
SNX4-204ENST00000473417 CLRN1P58418 232 aa15.74■□□□□ 0.11
SNX4-204ENST00000473417 ANKRD16Q6P6B7 361 aa15.74■□□□□ 0.11
SNX4-204ENST00000473417 KLHL17Q6TDP4 642 aa15.74■□□□□ 0.11
SNX4-204ENST00000473417 KLHL24Q6TFL4 600 aa15.74■□□□□ 0.11
SNX4-204ENST00000473417 PIAS4Q8N2W9 510 aaPredicted RBP15.74■□□□□ 0.11
SNX4-204ENST00000473417 SYT14Q8NB59 555 aa15.74■□□□□ 0.11
SNX4-204ENST00000473417 OR4C15Q8NGM1 316 aa15.74■□□□□ 0.11
SNX4-204ENST00000473417 TSPAN32Q96QS1 320 aa15.74■□□□□ 0.11
SNX4-204ENST00000473417 REEP1Q9H902 201 aa15.74■□□□□ 0.11
SNX4-204ENST00000473417 POFUT2Q9Y2G5 429 aa15.74■□□□□ 0.11
SNX4-204ENST00000473417 AMDHD2Q9Y303 409 aa15.74■□□□□ 0.11
SNX4-204ENST00000473417 SAMHD1Q9Y3Z3 626 aaKnown RBP15.74■□□□□ 0.11
SNX4-204ENST00000473417 ZNF99A8MXY4 864 aaPredicted RBP15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms