RNA–Protein interactions for RNA: ENST00000473036.2

TPM3-216, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 746 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-216ENST00000473036 IGKV1D-43A0A0B4J1Z2 117 aa11.47□□□□□ -0.57
TPM3-216ENST00000473036 CIB4A0PJX0 185 aa11.47□□□□□ -0.57
TPM3-216ENST00000473036 ARRDC5A6NEK1 342 aa11.47□□□□□ -0.57
TPM3-216ENST00000473036 FAM171A2A8MVW0 826 aa11.47□□□□□ -0.57
TPM3-216ENST00000473036 MCIDASD6RGH6 385 aa11.47□□□□□ -0.57
TPM3-216ENST00000473036 ZNF587BE7ETH6 402 aa11.47□□□□□ -0.57
TPM3-216ENST00000473036 G3V2T6 193 aa11.47□□□□□ -0.57
TPM3-216ENST00000473036 H3BNX3 289 aa11.47□□□□□ -0.57
TPM3-216ENST00000473036 SEC14L2O76054 403 aa11.47□□□□□ -0.57
TPM3-216ENST00000473036 ATP6V1G2O95670 118 aa11.47□□□□□ -0.57
TPM3-216ENST00000473036 SAGP10523 405 aaPredicted RBP11.47□□□□□ -0.57
TPM3-216ENST00000473036 TUBA1BP68363 451 aa11.47□□□□□ -0.57
TPM3-216ENST00000473036 TUBA4AP68366 448 aa11.47□□□□□ -0.57
TPM3-216ENST00000473036 ARF1P84077 181 aaKnown RBP11.47□□□□□ -0.57
TPM3-216ENST00000473036 PPA1Q15181 289 aa11.47□□□□□ -0.57
TPM3-216ENST00000473036 HIST3H3Q16695 136 aa11.47□□□□□ -0.57
TPM3-216ENST00000473036 CEACAM16Q2WEN9 425 aa11.47□□□□□ -0.57
TPM3-216ENST00000473036 ALG10Q5BKT4 473 aa11.47□□□□□ -0.57
TPM3-216ENST00000473036 SHQ1Q6PI26 577 aaKnown RBP11.47□□□□□ -0.57
TPM3-216ENST00000473036 TUBA1AQ71U36 451 aa11.47□□□□□ -0.57
TPM3-216ENST00000473036 TMEM179BQ7Z7N9 219 aa11.47□□□□□ -0.57
TPM3-216ENST00000473036 OR9Q2Q8NGE9 314 aa11.47□□□□□ -0.57
TPM3-216ENST00000473036 OR5K1Q8NHB7 308 aa11.47□□□□□ -0.57
TPM3-216ENST00000473036 LILRB1Q8NHL6 650 aaPredicted RBP11.47□□□□□ -0.57
TPM3-216ENST00000473036 LRTOMTQ8WZ04 291 aa11.47□□□□□ -0.57
TPM3-216ENST00000473036 HTRA1Q92743 480 aa11.47□□□□□ -0.57
TPM3-216ENST00000473036 HDAC2Q92769 488 aaKnown RBP11.47□□□□□ -0.57
TPM3-216ENST00000473036 NMD3Q96D46 503 aaKnown RBP11.47□□□□□ -0.57
TPM3-216ENST00000473036 PLPPR2Q96GM1 343 aa11.47□□□□□ -0.57
TPM3-216ENST00000473036 LRR1Q96L50 414 aa11.47□□□□□ -0.57
TPM3-216ENST00000473036 TSPAN32Q96QS1 320 aa11.47□□□□□ -0.57
TPM3-216ENST00000473036 TMEM204Q9BSN7 226 aa11.47□□□□□ -0.57
TPM3-216ENST00000473036 C9orf16Q9BUW7 83 aa11.47□□□□□ -0.57
TPM3-216ENST00000473036 ZNF556Q9HAH1 456 aa11.47□□□□□ -0.57
TPM3-216ENST00000473036 INIPQ9NRY2 104 aa11.47□□□□□ -0.57
TPM3-216ENST00000473036 ZNF226Q9NYT6 803 aa11.47□□□□□ -0.57
TPM3-216ENST00000473036 IL20RAQ9UHF4 553 aa11.47□□□□□ -0.57
TPM3-216ENST00000473036 ZNF346Q9UL40 294 aaKnown RBP11.47□□□□□ -0.57
TPM3-216ENST00000473036 SIGLEC7Q9Y286 467 aa11.47□□□□□ -0.57
TPM3-216ENST00000473036 TMEM5Q9Y2B1 443 aa11.47□□□□□ -0.57
TPM3-216ENST00000473036 A0A096LPE4 126 aa11.46□□□□□ -0.57
TPM3-216ENST00000473036 A0A1W2PPZ6 126 aa11.46□□□□□ -0.57
TPM3-216ENST00000473036 IMPA2O14732 288 aa11.46□□□□□ -0.57
TPM3-216ENST00000473036 CASKO14936 926 aa11.46□□□□□ -0.57
TPM3-216ENST00000473036 TRMUO75648 421 aaKnown RBP11.46□□□□□ -0.57
TPM3-216ENST00000473036 CCNB2O95067 398 aa11.46□□□□□ -0.57
TPM3-216ENST00000473036 IGHMP01871 453 aa11.46□□□□□ -0.57
TPM3-216ENST00000473036 ANXA8P13928 327 aa11.46□□□□□ -0.57
TPM3-216ENST00000473036 SLC9A3P48764 834 aa11.46□□□□□ -0.57
TPM3-216ENST00000473036 CTXN1P60606 82 aa11.46□□□□□ -0.57
TPM3-216ENST00000473036 MICAQ29983 383 aa11.46□□□□□ -0.57
TPM3-216ENST00000473036 TBRG1Q3YBR2 411 aa11.46□□□□□ -0.57
TPM3-216ENST00000473036 PGBD2Q6P3X8 592 aa11.46□□□□□ -0.57
TPM3-216ENST00000473036 FAM122BQ7Z309 247 aa11.46□□□□□ -0.57
TPM3-216ENST00000473036 OAFQ86UD1 273 aa11.46□□□□□ -0.57
TPM3-216ENST00000473036 MYPOPQ86VE0 399 aaPredicted RBP11.46□□□□□ -0.57
TPM3-216ENST00000473036 PACRGLQ8N7B6 248 aa11.46□□□□□ -0.57
TPM3-216ENST00000473036 C1orf162Q8NEQ5 155 aaPredicted RBP11.46□□□□□ -0.57
TPM3-216ENST00000473036 ZNF519Q8TB69 540 aa11.46□□□□□ -0.57
TPM3-216ENST00000473036 NEUROG1Q92886 237 aa11.46□□□□□ -0.57
TPM3-216ENST00000473036 EME1Q96AY2 570 aa11.46□□□□□ -0.57
TPM3-216ENST00000473036 SLC25A44Q96H78 314 aaPredicted RBP11.46□□□□□ -0.57
TPM3-216ENST00000473036 C1QTNF6Q9BXI9 259 aa11.46□□□□□ -0.57
TPM3-216ENST00000473036 TXNIPQ9H3M7 391 aa11.46□□□□□ -0.57
TPM3-216ENST00000473036 NOX3Q9HBY0 568 aa11.46□□□□□ -0.57
TPM3-216ENST00000473036 ZNF224Q9NZL3 707 aa11.46□□□□□ -0.57
TPM3-216ENST00000473036 ADAM18Q9Y3Q7 739 aa11.46□□□□□ -0.57
TPM3-216ENST00000473036 NPIPB13A6NJU9 1138 aa11.45□□□□□ -0.58
TPM3-216ENST00000473036 OR6C65A6NJZ3 312 aa11.45□□□□□ -0.58
TPM3-216ENST00000473036 ZNF726A6NNF4 738 aa11.45□□□□□ -0.58
TPM3-216ENST00000473036 NPIPB4C9JG80 1138 aa11.45□□□□□ -0.58
TPM3-216ENST00000473036 KRT33AO76009 404 aa11.45□□□□□ -0.58
TPM3-216ENST00000473036 BCL10O95999 233 aa11.45□□□□□ -0.58
TPM3-216ENST00000473036 ZNF23P17027 643 aa11.45□□□□□ -0.58
TPM3-216ENST00000473036 GSTM3P21266 225 aa11.45□□□□□ -0.58
TPM3-216ENST00000473036 GSSP48637 474 aa11.45□□□□□ -0.58
TPM3-216ENST00000473036 CSNK1A1P48729 337 aa11.45□□□□□ -0.58
TPM3-216ENST00000473036 ERVK-25P63136 954 aa11.45□□□□□ -0.58
TPM3-216ENST00000473036 ADAM8P78325 824 aa11.45□□□□□ -0.58
TPM3-216ENST00000473036 MYBPC1Q00872 1141 aa11.45□□□□□ -0.58
TPM3-216ENST00000473036 BSPH1Q075Z2 132 aa11.45□□□□□ -0.58
TPM3-216ENST00000473036 SPOCK1Q08629 439 aa11.45□□□□□ -0.58
TPM3-216ENST00000473036 DBPQ10586 325 aaPredicted RBP11.45□□□□□ -0.58
TPM3-216ENST00000473036 COX10Q12887 443 aa11.45□□□□□ -0.58
TPM3-216ENST00000473036 ANKDD1AQ495B1 522 aa11.45□□□□□ -0.58
TPM3-216ENST00000473036 ZBED5Q49AG3 693 aa11.45□□□□□ -0.58
TPM3-216ENST00000473036 BEX5Q5H9J7 111 aa11.45□□□□□ -0.58
TPM3-216ENST00000473036 NCMAPQ5T1S8 102 aa11.45□□□□□ -0.58
TPM3-216ENST00000473036 OR7E24Q6IFN5 339 aa11.45□□□□□ -0.58
TPM3-216ENST00000473036 C1orf94Q6P1W5 598 aa11.45□□□□□ -0.58
TPM3-216ENST00000473036 P2RY8Q86VZ1 359 aa11.45□□□□□ -0.58
TPM3-216ENST00000473036 GPR137CQ8N3F9 429 aa11.45□□□□□ -0.58
TPM3-216ENST00000473036 SYT14Q8NB59 555 aa11.45□□□□□ -0.58
TPM3-216ENST00000473036 FGFBP3Q8TAT2 258 aa11.45□□□□□ -0.58
TPM3-216ENST00000473036 GIPC3Q8TF64 312 aa11.45□□□□□ -0.58
TPM3-216ENST00000473036 MCHR2Q969V1 340 aa11.45□□□□□ -0.58
TPM3-216ENST00000473036 ADAD1Q96M93 576 aaKnown RBP11.45□□□□□ -0.58
TPM3-216ENST00000473036 KCNK17Q96T54 332 aa11.45□□□□□ -0.58
TPM3-216ENST00000473036 PKP2Q99959 881 aa11.45□□□□□ -0.58
TPM3-216ENST00000473036 RBM4BQ9BQ04 359 aaKnown RBP11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms