RNA–Protein interactions for RNA: ENST00000472608.5

ABCF3-209, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 657 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-209ENST00000472608 TXNDC15Q96J42 360 aa12.5□□□□□ -0.41
ABCF3-209ENST00000472608 CHID1Q9BWS9 393 aa12.5□□□□□ -0.41
ABCF3-209ENST00000472608 MED29Q9NX70 200 aa12.5□□□□□ -0.41
ABCF3-209ENST00000472608 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.5□□□□□ -0.41
ABCF3-209ENST00000472608 LYVE1Q9Y5Y7 322 aa12.5□□□□□ -0.41
ABCF3-209ENST00000472608 CIB4A0PJX0 185 aa12.49□□□□□ -0.41
ABCF3-209ENST00000472608 OVOL3O00110 214 aa12.49□□□□□ -0.41
ABCF3-209ENST00000472608 TNFRSF11BO00300 401 aa12.49□□□□□ -0.41
ABCF3-209ENST00000472608 CDC42EP2O14613 210 aa12.49□□□□□ -0.41
ABCF3-209ENST00000472608 CLOCKO15516 846 aa12.49□□□□□ -0.41
ABCF3-209ENST00000472608 KLF4O43474 513 aa12.49□□□□□ -0.41
ABCF3-209ENST00000472608 PTP4A3O75365 173 aa12.49□□□□□ -0.41
ABCF3-209ENST00000472608 UPK3AO75631 287 aa12.49□□□□□ -0.41
ABCF3-209ENST00000472608 IGHMP01871 453 aa12.49□□□□□ -0.41
ABCF3-209ENST00000472608 THBDP07204 575 aa12.49□□□□□ -0.41
ABCF3-209ENST00000472608 DAP3P51398 398 aaKnown RBP12.49□□□□□ -0.41
ABCF3-209ENST00000472608 ANKRD34AQ69YU3 496 aa12.49□□□□□ -0.41
ABCF3-209ENST00000472608 C1orf94Q6P1W5 598 aa12.49□□□□□ -0.41
ABCF3-209ENST00000472608 ZER1Q7Z7L7 766 aa12.49□□□□□ -0.41
ABCF3-209ENST00000472608 LRRC75AQ8NAA5 344 aa12.49□□□□□ -0.41
ABCF3-209ENST00000472608 MAGEE2Q8TD90 523 aaPredicted RBP12.49□□□□□ -0.41
ABCF3-209ENST00000472608 TNFRSF13CQ96RJ3 184 aa12.49□□□□□ -0.41
ABCF3-209ENST00000472608 TMEM204Q9BSN7 226 aa12.49□□□□□ -0.41
ABCF3-209ENST00000472608 EMC6Q9BV81 110 aa12.49□□□□□ -0.41
ABCF3-209ENST00000472608 NDEL1Q9GZM8 345 aa12.49□□□□□ -0.41
ABCF3-209ENST00000472608 TXNIPQ9H3M7 391 aa12.49□□□□□ -0.41
ABCF3-209ENST00000472608 NGBQ9NPG2 151 aa12.49□□□□□ -0.41
ABCF3-209ENST00000472608 B3GAT2Q9NPZ5 323 aa12.49□□□□□ -0.41
ABCF3-209ENST00000472608 CDC42EP3Q9UKI2 254 aa12.49□□□□□ -0.41
ABCF3-209ENST00000472608 AURKCQ9UQB9 309 aa12.49□□□□□ -0.41
ABCF3-209ENST00000472608 OR10H3O60404 316 aa12.48□□□□□ -0.41
ABCF3-209ENST00000472608 F13BP05160 661 aa12.48□□□□□ -0.41
ABCF3-209ENST00000472608 FPR3P25089 353 aa12.48□□□□□ -0.41
ABCF3-209ENST00000472608 GPR4P46093 362 aa12.48□□□□□ -0.41
ABCF3-209ENST00000472608 FOXG1P55316 489 aaPredicted RBP12.48□□□□□ -0.41
ABCF3-209ENST00000472608 BIDP55957 195 aa12.48□□□□□ -0.41
ABCF3-209ENST00000472608 ROR2Q01974 943 aaKnown RBP12.48□□□□□ -0.41
ABCF3-209ENST00000472608 CAMK2DQ13557 499 aa12.48□□□□□ -0.41
ABCF3-209ENST00000472608 TSC22D1Q15714 1073 aa12.48□□□□□ -0.41
ABCF3-209ENST00000472608 TAB1Q15750 504 aa12.48□□□□□ -0.41
ABCF3-209ENST00000472608 HIST3H3Q16695 136 aa12.48□□□□□ -0.41
ABCF3-209ENST00000472608 BEX5Q5H9J7 111 aa12.48□□□□□ -0.41
ABCF3-209ENST00000472608 ARMC4Q5T2S8 1044 aa12.48□□□□□ -0.41
ABCF3-209ENST00000472608 FAM205BPQ63HN1 556 aa12.48□□□□□ -0.41
ABCF3-209ENST00000472608 ZNF704Q6ZNC4 412 aaPredicted RBP12.48□□□□□ -0.41
ABCF3-209ENST00000472608 ZNF627Q7L945 461 aa12.48□□□□□ -0.41
ABCF3-209ENST00000472608 LINGO2Q7L985 606 aa12.48□□□□□ -0.41
ABCF3-209ENST00000472608 OR4C15Q8NGM1 316 aa12.48□□□□□ -0.41
ABCF3-209ENST00000472608 OR51A7Q8NH64 312 aa12.48□□□□□ -0.41
ABCF3-209ENST00000472608 MOSPD2Q8NHP6 518 aa12.48□□□□□ -0.41
ABCF3-209ENST00000472608 ASB10Q8WXI3 467 aa12.48□□□□□ -0.41
ABCF3-209ENST00000472608 TMEM54Q969K7 222 aa12.48□□□□□ -0.41
ABCF3-209ENST00000472608 ZNF566Q969W8 418 aa12.48□□□□□ -0.41
ABCF3-209ENST00000472608 MUCL1Q96DR8 90 aa12.48□□□□□ -0.41
ABCF3-209ENST00000472608 FAM46AQ96IP4 442 aaKnown RBP12.48□□□□□ -0.41
ABCF3-209ENST00000472608 GPX7Q96SL4 187 aaPredicted RBP12.48□□□□□ -0.41
ABCF3-209ENST00000472608 C19orf24Q9BVV8 132 aa12.48□□□□□ -0.41
ABCF3-209ENST00000472608 MRPL13Q9BYD1 178 aaKnown RBP12.48□□□□□ -0.41
ABCF3-209ENST00000472608 REEP1Q9H902 201 aa12.48□□□□□ -0.41
ABCF3-209ENST00000472608 GPR35Q9HC97 309 aa12.48□□□□□ -0.41
ABCF3-209ENST00000472608 OBP2BQ9NPH6 170 aa12.48□□□□□ -0.41
ABCF3-209ENST00000472608 TMEM160Q9NX00 188 aa12.48□□□□□ -0.41
ABCF3-209ENST00000472608 SIGLEC7Q9Y286 467 aa12.48□□□□□ -0.41
ABCF3-209ENST00000472608 PRR14LQ5THK1 2151 aa12.47□□□□□ -0.41
ABCF3-209ENST00000472608 TRAV27A0A087WT01 109 aa12.47□□□□□ -0.41
ABCF3-209ENST00000472608 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.47□□□□□ -0.41
ABCF3-209ENST00000472608 HS3ST1O14792 307 aa12.47□□□□□ -0.41
ABCF3-209ENST00000472608 SERPINI2O75830 405 aa12.47□□□□□ -0.41
ABCF3-209ENST00000472608 NDUFB2O95178 105 aa12.47□□□□□ -0.41
ABCF3-209ENST00000472608 CST1P01037 141 aa12.47□□□□□ -0.41
ABCF3-209ENST00000472608 IGHG1P01857 330 aa12.47□□□□□ -0.41
ABCF3-209ENST00000472608 PGA4P0DJD7 388 aa12.47□□□□□ -0.41
ABCF3-209ENST00000472608 PGA3P0DJD8 388 aa12.47□□□□□ -0.41
ABCF3-209ENST00000472608 NR2C1P13056 603 aa12.47□□□□□ -0.41
ABCF3-209ENST00000472608 GSSP48637 474 aa12.47□□□□□ -0.41
ABCF3-209ENST00000472608 CSNK1A1P48729 337 aa12.47□□□□□ -0.41
ABCF3-209ENST00000472608 ZNF133P52736 654 aaPredicted RBP12.47□□□□□ -0.41
ABCF3-209ENST00000472608 CTXN1P60606 82 aa12.47□□□□□ -0.41
ABCF3-209ENST00000472608 RPL27P61353 136 aaKnown RBP12.47□□□□□ -0.41
ABCF3-209ENST00000472608 TSPAN31Q12999 210 aa12.47□□□□□ -0.41
ABCF3-209ENST00000472608 MICAQ29983 383 aa12.47□□□□□ -0.41
ABCF3-209ENST00000472608 ANKRD16Q6P6B7 361 aa12.47□□□□□ -0.41
ABCF3-209ENST00000472608 CCDC36Q8IYA8 594 aa12.47□□□□□ -0.41
ABCF3-209ENST00000472608 OR13C2Q8NGS9 318 aa12.47□□□□□ -0.41
ABCF3-209ENST00000472608 OR6N1Q8NGY5 312 aa12.47□□□□□ -0.41
ABCF3-209ENST00000472608 FNDC8Q8TC99 324 aa12.47□□□□□ -0.41
ABCF3-209ENST00000472608 GNPDA2Q8TDQ7 276 aa12.47□□□□□ -0.41
ABCF3-209ENST00000472608 DUS3LQ96G46 650 aaKnown RBP12.47□□□□□ -0.41
ABCF3-209ENST00000472608 ALKBH3Q96Q83 286 aaPredicted RBP12.47□□□□□ -0.41
ABCF3-209ENST00000472608 GPA33Q99795 319 aa12.47□□□□□ -0.41
ABCF3-209ENST00000472608 CRLF2Q9HC73 371 aa12.47□□□□□ -0.41
ABCF3-209ENST00000472608 MOV10Q9HCE1 1003 aaKnown RBP12.47□□□□□ -0.41
ABCF3-209ENST00000472608 SLC17A5Q9NRA2 495 aa12.47□□□□□ -0.41
ABCF3-209ENST00000472608 GLTPQ9NZD2 209 aa12.47□□□□□ -0.41
ABCF3-209ENST00000472608 AMDHD2Q9Y303 409 aa12.47□□□□□ -0.41
ABCF3-209ENST00000472608 UNC119BA6NIH7 251 aa12.46□□□□□ -0.41
ABCF3-209ENST00000472608 ZNF99A8MXY4 864 aaPredicted RBP12.46□□□□□ -0.41
ABCF3-209ENST00000472608 MCIDASD6RGH6 385 aa12.46□□□□□ -0.41
ABCF3-209ENST00000472608 AHCYL1O43865 530 aa12.46□□□□□ -0.41
ABCF3-209ENST00000472608 MGRN1O60291 552 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms