RNA–Protein interactions for RNA: ENST00000472044.1

PTCD3-209, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 293 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-209ENST00000472044 HDHD3Q9BSH5 251 aaPredicted RBP2.4□□□□□ -2.03
PTCD3-209ENST00000472044 SLC17A9Q9BYT1 436 aa2.4□□□□□ -2.03
PTCD3-209ENST00000472044 CDC42EP4Q9H3Q1 356 aaKnown RBP2.4□□□□□ -2.03
PTCD3-209ENST00000472044 MYOZ2Q9NPC6 264 aa2.4□□□□□ -2.03
PTCD3-209ENST00000472044 NUP50Q9UKX7 468 aa2.4□□□□□ -2.03
PTCD3-209ENST00000472044 STARD10Q9Y365 291 aa2.4□□□□□ -2.03
PTCD3-209ENST00000472044 ARID1AO14497 2285 aa2.4□□□□□ -2.03
PTCD3-209ENST00000472044 IGLV3-16A0A075B6K0 115 aa2.39□□□□□ -2.03
PTCD3-209ENST00000472044 PRSS37A4D1T9 235 aa2.39□□□□□ -2.03
PTCD3-209ENST00000472044 CCDC169A6NNP5 214 aa2.39□□□□□ -2.03
PTCD3-209ENST00000472044 AP3B1O00203 1094 aa2.39□□□□□ -2.03
PTCD3-209ENST00000472044 SNAI2O43623 268 aa2.39□□□□□ -2.03
PTCD3-209ENST00000472044 ZNF30P17039 623 aa2.39□□□□□ -2.03
PTCD3-209ENST00000472044 SERPINB5P36952 375 aa2.39□□□□□ -2.03
PTCD3-209ENST00000472044 CXCL5P42830 114 aa2.39□□□□□ -2.03
PTCD3-209ENST00000472044 PPP1R7Q15435 360 aa2.39□□□□□ -2.03
PTCD3-209ENST00000472044 TGFBIQ15582 683 aa2.39□□□□□ -2.03
PTCD3-209ENST00000472044 KCTD19Q17RG1 926 aaPredicted RBP2.39□□□□□ -2.03
PTCD3-209ENST00000472044 TTLL9Q3SXZ7 439 aa2.39□□□□□ -2.03
PTCD3-209ENST00000472044 ZBED5Q49AG3 693 aa2.39□□□□□ -2.03
PTCD3-209ENST00000472044 VPS26BQ4G0F5 336 aa2.39□□□□□ -2.03
PTCD3-209ENST00000472044 MS4A15Q8N5U1 240 aa2.39□□□□□ -2.03
PTCD3-209ENST00000472044 Q8N976 141 aa2.39□□□□□ -2.03
PTCD3-209ENST00000472044 ZNF596Q8TC21 504 aa2.39□□□□□ -2.03
PTCD3-209ENST00000472044 GEMIN6Q8WXD5 167 aaKnown RBP2.39□□□□□ -2.03
PTCD3-209ENST00000472044 TSSK3Q96PN8 268 aa2.39□□□□□ -2.03
PTCD3-209ENST00000472044 GABARAPL3Q9BY60 117 aa2.39□□□□□ -2.03
PTCD3-209ENST00000472044 RACGAP1Q9H0H5 632 aa2.39□□□□□ -2.03
PTCD3-209ENST00000472044 TPK1Q9H3S4 243 aa2.39□□□□□ -2.03
PTCD3-209ENST00000472044 PSMC3IPQ9P2W1 217 aaPredicted RBP2.39□□□□□ -2.03
PTCD3-209ENST00000472044 KLK12Q9UKR0 248 aa2.39□□□□□ -2.03
PTCD3-209ENST00000472044 RRP15Q9Y3B9 282 aaKnown RBP2.39□□□□□ -2.03
PTCD3-209ENST00000472044 NFASCO94856 1347 aa2.39□□□□□ -2.03
PTCD3-209ENST00000472044 IGLV4-69A0A075B6H9 119 aa2.38□□□□□ -2.03
PTCD3-209ENST00000472044 HEATR9A2RTY3 570 aa2.38□□□□□ -2.03
PTCD3-209ENST00000472044 TNNI1P19237 187 aa2.38□□□□□ -2.03
PTCD3-209ENST00000472044 RFX3P48380 749 aa2.38□□□□□ -2.03
PTCD3-209ENST00000472044 RORCP51449 518 aa2.38□□□□□ -2.03
PTCD3-209ENST00000472044 SSR4P51571 173 aa2.38□□□□□ -2.03
PTCD3-209ENST00000472044 MNAT1P51948 309 aa2.38□□□□□ -2.03
PTCD3-209ENST00000472044 ZNF136P52737 540 aa2.38□□□□□ -2.03
PTCD3-209ENST00000472044 PAX5Q02548 391 aa2.38□□□□□ -2.03
PTCD3-209ENST00000472044 ENPEPQ07075 957 aa2.38□□□□□ -2.03
PTCD3-209ENST00000472044 CCDC183Q5T5S1 534 aa2.38□□□□□ -2.03
PTCD3-209ENST00000472044 CCDC73Q6ZRK6 1079 aa2.38□□□□□ -2.03
PTCD3-209ENST00000472044 Q6ZSR3 168 aa2.38□□□□□ -2.03
PTCD3-209ENST00000472044 LINC00173Q6ZV60 143 aa2.38□□□□□ -2.03
PTCD3-209ENST00000472044 TMEM179Q6ZVK1 233 aa2.38□□□□□ -2.03
PTCD3-209ENST00000472044 AKNAQ7Z591 1439 aa2.38□□□□□ -2.03
PTCD3-209ENST00000472044 PCP2Q8IVA1 136 aa2.38□□□□□ -2.03
PTCD3-209ENST00000472044 SAXO1Q8IYX7 474 aa2.38□□□□□ -2.03
PTCD3-209ENST00000472044 MREGQ8N565 214 aa2.38□□□□□ -2.03
PTCD3-209ENST00000472044 HSD17B11Q8NBQ5 300 aa2.38□□□□□ -2.03
PTCD3-209ENST00000472044 B3GNT7Q8NFL0 401 aa2.38□□□□□ -2.03
PTCD3-209ENST00000472044 OR7G2Q8NG99 324 aa2.38□□□□□ -2.03
PTCD3-209ENST00000472044 OR56B2PQ8NGI1 322 aa2.38□□□□□ -2.03
PTCD3-209ENST00000472044 OR1S2Q8NGQ3 325 aa2.38□□□□□ -2.03
PTCD3-209ENST00000472044 RHEBL1Q8TAI7 183 aa2.38□□□□□ -2.03
PTCD3-209ENST00000472044 RAB3IL1Q8TBN0 382 aa2.38□□□□□ -2.03
PTCD3-209ENST00000472044 LKAAEAR1Q8TD35 194 aa2.38□□□□□ -2.03
PTCD3-209ENST00000472044 DNAJC19Q96DA6 116 aa2.38□□□□□ -2.03
PTCD3-209ENST00000472044 PIK3IP1Q96FE7 263 aa2.38□□□□□ -2.03
PTCD3-209ENST00000472044 WFIKKN1Q96NZ8 548 aa2.38□□□□□ -2.03
PTCD3-209ENST00000472044 TAAR1Q96RJ0 339 aa2.38□□□□□ -2.03
PTCD3-209ENST00000472044 PLIN2Q99541 437 aa2.38□□□□□ -2.03
PTCD3-209ENST00000472044 CCDC77Q9BR77 488 aa2.38□□□□□ -2.03
PTCD3-209ENST00000472044 MRPL37Q9BZE1 423 aaKnown RBP2.38□□□□□ -2.03
PTCD3-209ENST00000472044 IFI27L2Q9H2X8 130 aa2.38□□□□□ -2.03
PTCD3-209ENST00000472044 CWH43Q9H720 699 aa2.38□□□□□ -2.03
PTCD3-209ENST00000472044 SLCO1B3Q9NPD5 702 aa2.38□□□□□ -2.03
PTCD3-209ENST00000472044 LHX9Q9NQ69 397 aa2.38□□□□□ -2.03
PTCD3-209ENST00000472044 INPP5EQ9NRR6 644 aa2.38□□□□□ -2.03
PTCD3-209ENST00000472044 TBX21Q9UL17 535 aa2.38□□□□□ -2.03
PTCD3-209ENST00000472044 CENPJQ9HC77 1338 aaPredicted RBP2.38□□□□□ -2.03
PTCD3-209ENST00000472044 USP47Q96K76 1375 aa2.37□□□□□ -2.03
PTCD3-209ENST00000472044 IGKV6D-21A0A0A0MT36 114 aa2.37□□□□□ -2.03
PTCD3-209ENST00000472044 GOLGA8OA6NCC3 632 aa2.37□□□□□ -2.03
PTCD3-209ENST00000472044 FAM47DPA6NHR8 397 aa2.37□□□□□ -2.03
PTCD3-209ENST00000472044 TRIM64CA6NLI5 447 aa2.37□□□□□ -2.03
PTCD3-209ENST00000472044 GOLGA8NF8WBI6 632 aa2.37□□□□□ -2.03
PTCD3-209ENST00000472044 TMX2-CTNND1H3BSU7 103 aa2.37□□□□□ -2.03
PTCD3-209ENST00000472044 CD5LO43866 347 aa2.37□□□□□ -2.03
PTCD3-209ENST00000472044 FGGP02679 453 aa2.37□□□□□ -2.03
PTCD3-209ENST00000472044 PRB2P02812 416 aaPredicted RBP2.37□□□□□ -2.03
PTCD3-209ENST00000472044 PLEKP08567 350 aaPredicted RBP2.37□□□□□ -2.03
PTCD3-209ENST00000472044 TROVE2P10155 538 aaKnown RBP eCLIP2.37□□□□□ -2.03
PTCD3-209ENST00000472044 CNR1P21554 472 aa2.37□□□□□ -2.03
PTCD3-209ENST00000472044 CHMLP26374 656 aa2.37□□□□□ -2.03
PTCD3-209ENST00000472044 AK4P27144 223 aaPredicted RBP2.37□□□□□ -2.03
PTCD3-209ENST00000472044 HNRNPH3P31942 346 aaKnown RBP2.37□□□□□ -2.03
PTCD3-209ENST00000472044 FOXN2P32314 431 aa2.37□□□□□ -2.03
PTCD3-209ENST00000472044 NSG1P42857 185 aa2.37□□□□□ -2.03
PTCD3-209ENST00000472044 TNNT2P45379 298 aaPredicted RBP2.37□□□□□ -2.03
PTCD3-209ENST00000472044 PPOXP50336 477 aa2.37□□□□□ -2.03
PTCD3-209ENST00000472044 CCNHP51946 323 aaPredicted RBP2.37□□□□□ -2.03
PTCD3-209ENST00000472044 MADCAM1Q13477 382 aa2.37□□□□□ -2.03
PTCD3-209ENST00000472044 GGTLC2Q14390 218 aa2.37□□□□□ -2.03
PTCD3-209ENST00000472044 PON3Q15166 354 aa2.37□□□□□ -2.03
PTCD3-209ENST00000472044 SASS6Q6UVJ0 657 aa2.37□□□□□ -2.03
PTCD3-209ENST00000472044 CERS6Q6ZMG9 384 aa2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms