RNA–Protein interactions for RNA: ENST00000471307.6

CCDC39-202, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 783 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-202ENST00000471307 AK4P27144 223 aaPredicted RBP4.1□□□□□ -1.75
CCDC39-202ENST00000471307 SLC1A6P48664 564 aa4.1□□□□□ -1.75
CCDC39-202ENST00000471307 PKNOX1P55347 436 aa4.1□□□□□ -1.75
CCDC39-202ENST00000471307 TRA2BP62995 288 aaKnown RBP4.1□□□□□ -1.75
CCDC39-202ENST00000471307 CBX1P83916 185 aa4.1□□□□□ -1.75
CCDC39-202ENST00000471307 FOLH1Q04609 750 aa4.1□□□□□ -1.75
CCDC39-202ENST00000471307 BST1Q10588 318 aa4.1□□□□□ -1.75
CCDC39-202ENST00000471307 SRSF5Q13243 272 aaKnown RBP4.1□□□□□ -1.75
CCDC39-202ENST00000471307 SCGB2A2Q13296 93 aa4.1□□□□□ -1.75
CCDC39-202ENST00000471307 LRRC23Q53EV4 343 aaPredicted RBP4.1□□□□□ -1.75
CCDC39-202ENST00000471307 UNC50Q53HI1 259 aa4.1□□□□□ -1.75
CCDC39-202ENST00000471307 ZNF542PQ5EBM4 170 aa4.1□□□□□ -1.75
CCDC39-202ENST00000471307 ZNF506Q5JVG8 444 aa4.1□□□□□ -1.75
CCDC39-202ENST00000471307 TTC19Q6DKK2 380 aaPredicted RBP4.1□□□□□ -1.75
CCDC39-202ENST00000471307 CAPN13Q6MZZ7 669 aaPredicted RBP4.1□□□□□ -1.75
CCDC39-202ENST00000471307 AGTRAPQ6RW13 159 aa4.1□□□□□ -1.75
CCDC39-202ENST00000471307 CRLF3Q8IUI8 442 aa4.1□□□□□ -1.75
CCDC39-202ENST00000471307 SERPINA12Q8IW75 414 aa4.1□□□□□ -1.75
CCDC39-202ENST00000471307 KLHDC8AQ8IYD2 350 aa4.1□□□□□ -1.75
CCDC39-202ENST00000471307 ELMOD2Q8IZ81 293 aa4.1□□□□□ -1.75
CCDC39-202ENST00000471307 Q8N7P7 452 aa4.1□□□□□ -1.75
CCDC39-202ENST00000471307 CCNYL1Q8N7R7 359 aa4.1□□□□□ -1.75
CCDC39-202ENST00000471307 KLHL30-AS1Q8NEE0 82 aa4.1□□□□□ -1.75
CCDC39-202ENST00000471307 OR5AR1Q8NGP9 310 aa4.1□□□□□ -1.75
CCDC39-202ENST00000471307 OR4Q3Q8NH05 313 aa4.1□□□□□ -1.75
CCDC39-202ENST00000471307 CCL4L1Q8NHW4 92 aa4.1□□□□□ -1.75
CCDC39-202ENST00000471307 LMX1AQ8TE12 382 aa4.1□□□□□ -1.75
CCDC39-202ENST00000471307 UBTD2Q8WUN7 234 aa4.1□□□□□ -1.75
CCDC39-202ENST00000471307 RFT1Q96AA3 541 aa4.1□□□□□ -1.75
CCDC39-202ENST00000471307 CXorf40BQ96DE9 158 aa4.1□□□□□ -1.75
CCDC39-202ENST00000471307 C17orf62Q9BQA9 187 aa4.1□□□□□ -1.75
CCDC39-202ENST00000471307 NTMT1Q9BV86 223 aa4.1□□□□□ -1.75
CCDC39-202ENST00000471307 PINK1Q9BXM7 581 aa4.1□□□□□ -1.75
CCDC39-202ENST00000471307 ILKAPQ9H0C8 392 aaPredicted RBP4.1□□□□□ -1.75
CCDC39-202ENST00000471307 NSRP1Q9H0G5 558 aaKnown RBP4.1□□□□□ -1.75
CCDC39-202ENST00000471307 PCBD2Q9H0N5 130 aa4.1□□□□□ -1.75
CCDC39-202ENST00000471307 TCEAL2Q9H3H9 227 aaPredicted RBP4.1□□□□□ -1.75
CCDC39-202ENST00000471307 KIR3DX1Q9H7L2 352 aa4.1□□□□□ -1.75
CCDC39-202ENST00000471307 SP140LQ9H930 580 aa4.1□□□□□ -1.75
CCDC39-202ENST00000471307 WDR41Q9HAD4 459 aa4.1□□□□□ -1.75
CCDC39-202ENST00000471307 KCNK13Q9HB14 408 aa4.1□□□□□ -1.75
CCDC39-202ENST00000471307 SLC40A1Q9NP59 571 aa4.1□□□□□ -1.75
CCDC39-202ENST00000471307 NGBQ9NPG2 151 aa4.1□□□□□ -1.75
CCDC39-202ENST00000471307 IMP3Q9NV31 184 aaKnown RBP4.1□□□□□ -1.75
CCDC39-202ENST00000471307 SPATA7Q9P0W8 599 aa4.1□□□□□ -1.75
CCDC39-202ENST00000471307 STOX2Q9P2F5 926 aaPredicted RBP4.1□□□□□ -1.75
CCDC39-202ENST00000471307 ANKMY1Q9P2S6 941 aa4.1□□□□□ -1.75
CCDC39-202ENST00000471307 OPTCQ9UBM4 332 aa4.1□□□□□ -1.75
CCDC39-202ENST00000471307 RAB23Q9ULC3 237 aa4.1□□□□□ -1.75
CCDC39-202ENST00000471307 SPATA2Q9UM82 520 aa4.1□□□□□ -1.75
CCDC39-202ENST00000471307 KMT2EQ8IZD2 1858 aa4.09□□□□□ -1.75
CCDC39-202ENST00000471307 A0A1B0GTQ1 180 aa4.09□□□□□ -1.75
CCDC39-202ENST00000471307 C2orf92A0A1B0GVN3 265 aa4.09□□□□□ -1.75
CCDC39-202ENST00000471307 OR52A4PA6NMU1 304 aa4.09□□□□□ -1.75
CCDC39-202ENST00000471307 E5RGE8 158 aa4.09□□□□□ -1.75
CCDC39-202ENST00000471307 E2F3O00716 465 aa4.09□□□□□ -1.75
CCDC39-202ENST00000471307 FLRT2O43155 660 aa4.09□□□□□ -1.75
CCDC39-202ENST00000471307 TSC22D2O75157 780 aa4.09□□□□□ -1.75
CCDC39-202ENST00000471307 FAM107AO95990 144 aa4.09□□□□□ -1.75
CCDC39-202ENST00000471307 OTCP00480 354 aa4.09□□□□□ -1.75
CCDC39-202ENST00000471307 RPS17P08708 135 aaKnown RBP4.09□□□□□ -1.75
CCDC39-202ENST00000471307 TROVE2P10155 538 aaKnown RBP eCLIP4.09□□□□□ -1.75
CCDC39-202ENST00000471307 ERGP11308 486 aa4.09□□□□□ -1.75
CCDC39-202ENST00000471307 PRG2P13727 222 aa4.09□□□□□ -1.75
CCDC39-202ENST00000471307 IMPA1P29218 277 aa4.09□□□□□ -1.75
CCDC39-202ENST00000471307 SHMT2P34897 504 aa4.09□□□□□ -1.75
CCDC39-202ENST00000471307 PEX19P40855 299 aa4.09□□□□□ -1.75
CCDC39-202ENST00000471307 BDKRB1P46663 353 aa4.09□□□□□ -1.75
CCDC39-202ENST00000471307 RPL14P50914 215 aaKnown RBP4.09□□□□□ -1.75
CCDC39-202ENST00000471307 UCP2P55851 309 aa4.09□□□□□ -1.75
CCDC39-202ENST00000471307 LYZP61626 148 aa4.09□□□□□ -1.75
CCDC39-202ENST00000471307 UBE2IP63279 158 aaKnown RBP4.09□□□□□ -1.75
CCDC39-202ENST00000471307 SLC34A1Q06495 639 aa4.09□□□□□ -1.75
CCDC39-202ENST00000471307 ZNF33BQ06732 778 aa4.09□□□□□ -1.75
CCDC39-202ENST00000471307 LCP2Q13094 533 aa4.09□□□□□ -1.75
CCDC39-202ENST00000471307 C1orf61Q13536 156 aa4.09□□□□□ -1.75
CCDC39-202ENST00000471307 GRB7Q14451 532 aa4.09□□□□□ -1.75
CCDC39-202ENST00000471307 ACKR1Q16570 336 aa4.09□□□□□ -1.75
CCDC39-202ENST00000471307 CCSMST1Q4G0I0 132 aa4.09□□□□□ -1.75
CCDC39-202ENST00000471307 LINC00242Q5T6M2 205 aa4.09□□□□□ -1.75
CCDC39-202ENST00000471307 RIPPLY2Q5TAB7 128 aa4.09□□□□□ -1.75
CCDC39-202ENST00000471307 LIPJQ5W064 366 aa4.09□□□□□ -1.75
CCDC39-202ENST00000471307 LEMD1Q68G75 181 aa4.09□□□□□ -1.75
CCDC39-202ENST00000471307 IRGCQ6NXR0 463 aa4.09□□□□□ -1.75
CCDC39-202ENST00000471307 ZCCHC23Q6ZST2 131 aa4.09□□□□□ -1.75
CCDC39-202ENST00000471307 LRRC70Q7Z2Q7 622 aa4.09□□□□□ -1.75
CCDC39-202ENST00000471307 GOLGA7Q7Z5G4 137 aa4.09□□□□□ -1.75
CCDC39-202ENST00000471307 C5orf24Q7Z6I8 188 aa4.09□□□□□ -1.75
CCDC39-202ENST00000471307 THOC6Q86W42 341 aaKnown RBP4.09□□□□□ -1.75
CCDC39-202ENST00000471307 ANKRD46Q86W74 232 aa4.09□□□□□ -1.75
CCDC39-202ENST00000471307 C17orf82Q86X59 251 aaPredicted RBP4.09□□□□□ -1.75
CCDC39-202ENST00000471307 LRRC34Q8IZ02 419 aa4.09□□□□□ -1.75
CCDC39-202ENST00000471307 SLC25A45Q8N413 288 aa4.09□□□□□ -1.75
CCDC39-202ENST00000471307 OR6C4Q8NGE1 309 aa4.09□□□□□ -1.75
CCDC39-202ENST00000471307 OR2L8Q8NGY9 312 aa4.09□□□□□ -1.75
CCDC39-202ENST00000471307 LCN9Q8WX39 176 aa4.09□□□□□ -1.75
CCDC39-202ENST00000471307 SMPDL3AQ92484 453 aa4.09□□□□□ -1.75
CCDC39-202ENST00000471307 ALKBH3Q96Q83 286 aaPredicted RBP4.09□□□□□ -1.75
CCDC39-202ENST00000471307 CCT8L2Q96SF2 557 aa4.09□□□□□ -1.75
CCDC39-202ENST00000471307 ZNF382Q96SR6 550 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms