RNA–Protein interactions for RNA: ENST00000471246.1

UBXN4-207, Transcript of UBX domain protein 4, humanhuman

TSL 3

Gene UBXN4, Length 395 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-207ENST00000471246 PIPOXQ9P0Z9 390 aa0.58□□□□□ -2.32
UBXN4-207ENST00000471246 ZNF391Q9UJN7 358 aa0.58□□□□□ -2.32
UBXN4-207ENST00000471246 RPH3ALQ9UNE2 315 aa0.58□□□□□ -2.32
UBXN4-207ENST00000471246 PSG8Q9UQ74 426 aa0.58□□□□□ -2.32
UBXN4-207ENST00000471246 POLDIP2Q9Y2S7 368 aa0.58□□□□□ -2.32
UBXN4-207ENST00000471246 MMACHCQ9Y4U1 282 aa0.58□□□□□ -2.32
UBXN4-207ENST00000471246 SORL1Q92673 2214 aa0.58□□□□□ -2.32
UBXN4-207ENST00000471246 BDP1A6H8Y1 2624 aa0.58□□□□□ -2.32
UBXN4-207ENST00000471246 WDR62O43379 1518 aa0.58□□□□□ -2.32
UBXN4-207ENST00000471246 ABCC9O60706 1549 aa0.58□□□□□ -2.32
UBXN4-207ENST00000471246 TNRC18O15417 2968 aaPredicted RBP0.57□□□□□ -2.32
UBXN4-207ENST00000471246 KALRNO60229 2985 aa0.57□□□□□ -2.32
UBXN4-207ENST00000471246 SVILO95425 2214 aa0.57□□□□□ -2.32
UBXN4-207ENST00000471246 TNS2Q63HR2 1409 aa0.57□□□□□ -2.32
UBXN4-207ENST00000471246 LRRK2Q5S007 2527 aa0.57□□□□□ -2.32
UBXN4-207ENST00000471246 IGKV2-24A0A0C4DH68 120 aa0.57□□□□□ -2.32
UBXN4-207ENST00000471246 ZNF726A6NNF4 738 aa0.57□□□□□ -2.32
UBXN4-207ENST00000471246 HIDE1A8MVS5 230 aa0.57□□□□□ -2.32
UBXN4-207ENST00000471246 C16orf90A8MZG2 172 aa0.57□□□□□ -2.32
UBXN4-207ENST00000471246 CCER2I3L3R5 266 aa0.57□□□□□ -2.32
UBXN4-207ENST00000471246 LGALS9O00182 355 aa0.57□□□□□ -2.32
UBXN4-207ENST00000471246 XPO1O14980 1071 aaKnown RBP0.57□□□□□ -2.32
UBXN4-207ENST00000471246 PRKAB2O43741 272 aa0.57□□□□□ -2.32
UBXN4-207ENST00000471246 TOM1O60784 492 aa0.57□□□□□ -2.32
UBXN4-207ENST00000471246 RP2O75695 350 aa0.57□□□□□ -2.32
UBXN4-207ENST00000471246 DIRAS3O95661 229 aa0.57□□□□□ -2.32
UBXN4-207ENST00000471246 HLA-DPB1P04440 258 aa0.57□□□□□ -2.32
UBXN4-207ENST00000471246 CAPN1P07384 714 aa0.57□□□□□ -2.32
UBXN4-207ENST00000471246 ZNF806P0C7X5 589 aa0.57□□□□□ -2.32
UBXN4-207ENST00000471246 P0C880 135 aa0.57□□□□□ -2.32
UBXN4-207ENST00000471246 EPB41P11171 864 aaKnown RBP0.57□□□□□ -2.32
UBXN4-207ENST00000471246 CCDC130P13994 396 aa0.57□□□□□ -2.32
UBXN4-207ENST00000471246 GNA11P29992 359 aa0.57□□□□□ -2.32
UBXN4-207ENST00000471246 OPRK1P41145 380 aa0.57□□□□□ -2.32
UBXN4-207ENST00000471246 CSNK1A1P48729 337 aa0.57□□□□□ -2.32
UBXN4-207ENST00000471246 SLC11A1P49279 550 aa0.57□□□□□ -2.32
UBXN4-207ENST00000471246 RGS4P49798 205 aa0.57□□□□□ -2.32
UBXN4-207ENST00000471246 CDH4P55283 916 aa0.57□□□□□ -2.32
UBXN4-207ENST00000471246 ARG2P78540 354 aa0.57□□□□□ -2.32
UBXN4-207ENST00000471246 ZNF616Q08AN1 781 aa0.57□□□□□ -2.32
UBXN4-207ENST00000471246 SCRN3Q0VDG4 424 aa0.57□□□□□ -2.32
UBXN4-207ENST00000471246 BAMBIQ13145 260 aa0.57□□□□□ -2.32
UBXN4-207ENST00000471246 IL15RAQ13261 267 aa0.57□□□□□ -2.32
UBXN4-207ENST00000471246 PIGHQ14442 188 aaPredicted RBP0.57□□□□□ -2.32
UBXN4-207ENST00000471246 PRPSAP1Q14558 356 aa0.57□□□□□ -2.32
UBXN4-207ENST00000471246 RABL6Q3YEC7 729 aaPredicted RBP0.57□□□□□ -2.32
UBXN4-207ENST00000471246 SMUG1Q53HV7 270 aa0.57□□□□□ -2.32
UBXN4-207ENST00000471246 TTC23Q5W5X9 447 aa0.57□□□□□ -2.32
UBXN4-207ENST00000471246 SAXO2Q658L1 398 aa0.57□□□□□ -2.32
UBXN4-207ENST00000471246 PRMT9Q6P2P2 845 aa0.57□□□□□ -2.32
UBXN4-207ENST00000471246 TRIM40Q6P9F5 258 aa0.57□□□□□ -2.32
UBXN4-207ENST00000471246 UNQ9165/PRO28630Q6UXU0 137 aa0.57□□□□□ -2.32
UBXN4-207ENST00000471246 TMEM123Q8N131 208 aa0.57□□□□□ -2.32
UBXN4-207ENST00000471246 MIR7-3HGQ8N6C7 128 aa0.57□□□□□ -2.32
UBXN4-207ENST00000471246 ZNF557Q8N988 423 aaPredicted RBP0.57□□□□□ -2.32
UBXN4-207ENST00000471246 FAM133AQ8N9E0 248 aa0.57□□□□□ -2.32
UBXN4-207ENST00000471246 OR4S2Q8NH73 311 aa0.57□□□□□ -2.32
UBXN4-207ENST00000471246 TRMT10AQ8TBZ6 339 aaKnown RBP0.57□□□□□ -2.32
UBXN4-207ENST00000471246 PYROXD1Q8WU10 500 aa0.57□□□□□ -2.32
UBXN4-207ENST00000471246 ABHD3Q8WU67 409 aa0.57□□□□□ -2.32
UBXN4-207ENST00000471246 RTN4IP1Q8WWV3 396 aaPredicted RBP0.57□□□□□ -2.32
UBXN4-207ENST00000471246 UBE2E3Q969T4 207 aa0.57□□□□□ -2.32
UBXN4-207ENST00000471246 CXorf40BQ96DE9 158 aa0.57□□□□□ -2.32
UBXN4-207ENST00000471246 MED8Q96G25 268 aa0.57□□□□□ -2.32
UBXN4-207ENST00000471246 TIMM29Q9BSF4 260 aa0.57□□□□□ -2.32
UBXN4-207ENST00000471246 UBE2ZQ9H832 354 aaPredicted RBP0.57□□□□□ -2.32
UBXN4-207ENST00000471246 MCCC2Q9HCC0 563 aa0.57□□□□□ -2.32
UBXN4-207ENST00000471246 BFARQ9NZS9 450 aa0.57□□□□□ -2.32
UBXN4-207ENST00000471246 ACTR3BQ9P1U1 418 aa0.57□□□□□ -2.32
UBXN4-207ENST00000471246 ZNF230Q9UIE0 474 aaPredicted RBP0.57□□□□□ -2.32
UBXN4-207ENST00000471246 KIAA1257Q9ULG3 409 aa0.57□□□□□ -2.32
UBXN4-207ENST00000471246 EPG5Q9HCE0 2579 aa0.57□□□□□ -2.32
UBXN4-207ENST00000471246 PRR14LQ5THK1 2151 aa0.57□□□□□ -2.32
UBXN4-207ENST00000471246 GPATCH8Q9UKJ3 1502 aaKnown RBP0.57□□□□□ -2.32
UBXN4-207ENST00000471246 THADAQ6YHU6 1953 aa0.57□□□□□ -2.32
UBXN4-207ENST00000471246 CENPJQ9HC77 1338 aaPredicted RBP0.57□□□□□ -2.32
UBXN4-207ENST00000471246 DOPEY1Q5JWR5 2465 aa0.57□□□□□ -2.32
UBXN4-207ENST00000471246 MSH6P52701 1360 aa0.57□□□□□ -2.32
UBXN4-207ENST00000471246 PIEZO1Q92508 2521 aa0.57□□□□□ -2.32
UBXN4-207ENST00000471246 A0A0B4J2A0 478 aa0.56□□□□□ -2.32
UBXN4-207ENST00000471246 UBXN8O00124 270 aa0.56□□□□□ -2.32
UBXN4-207ENST00000471246 PRRG1O14668 218 aa0.56□□□□□ -2.32
UBXN4-207ENST00000471246 MGRN1O60291 552 aa0.56□□□□□ -2.32
UBXN4-207ENST00000471246 GCM2O75603 506 aaPredicted RBP0.56□□□□□ -2.32
UBXN4-207ENST00000471246 IGHDP01880 384 aa0.56□□□□□ -2.32
UBXN4-207ENST00000471246 APCSP02743 223 aa0.56□□□□□ -2.32
UBXN4-207ENST00000471246 FGF1P05230 155 aa0.56□□□□□ -2.32
UBXN4-207ENST00000471246 HSMCR30P0CW71 290 aa0.56□□□□□ -2.32
UBXN4-207ENST00000471246 NCF1P14598 390 aaPredicted RBP0.56□□□□□ -2.32
UBXN4-207ENST00000471246 LGALS3P17931 250 aaKnown RBP0.56□□□□□ -2.32
UBXN4-207ENST00000471246 DRD5P21918 477 aa0.56□□□□□ -2.32
UBXN4-207ENST00000471246 SLC2A5P22732 501 aa0.56□□□□□ -2.32
UBXN4-207ENST00000471246 AK4P27144 223 aaPredicted RBP0.56□□□□□ -2.32
UBXN4-207ENST00000471246 CCR1P32246 355 aa0.56□□□□□ -2.32
UBXN4-207ENST00000471246 HRH1P35367 487 aa0.56□□□□□ -2.32
UBXN4-207ENST00000471246 OPRD1P41143 372 aa0.56□□□□□ -2.32
UBXN4-207ENST00000471246 PPT1P50897 306 aa0.56□□□□□ -2.32
UBXN4-207ENST00000471246 PRRX1P54821 245 aa0.56□□□□□ -2.32
UBXN4-207ENST00000471246 CDK16Q00536 496 aa0.56□□□□□ -2.32
UBXN4-207ENST00000471246 FLI1Q01543 452 aaPredicted RBP0.56□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms