RNA–Protein interactions for RNA: ENST00000470170.1

COL11A1-208, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 2

Gene COL11A1, Length 785 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-208ENST00000470170 C5orf47Q569G3 176 aa3.28□□□□□ -1.88
COL11A1-208ENST00000470170 OTPQ5XKR4 325 aa3.28□□□□□ -1.88
COL11A1-208ENST00000470170 STEAP1BQ6NZ63 245 aa3.28□□□□□ -1.88
COL11A1-208ENST00000470170 DPY19L2P2Q6ZN68 376 aa3.28□□□□□ -1.88
COL11A1-208ENST00000470170 FAM122BQ7Z309 247 aa3.28□□□□□ -1.88
COL11A1-208ENST00000470170 DHDDSQ86SQ9 333 aa3.28□□□□□ -1.88
COL11A1-208ENST00000470170 MOB3BQ86TA1 216 aa3.28□□□□□ -1.88
COL11A1-208ENST00000470170 TMEM17Q86X19 198 aa3.28□□□□□ -1.88
COL11A1-208ENST00000470170 RNF175Q8N4F7 328 aa3.28□□□□□ -1.88
COL11A1-208ENST00000470170 INO80EQ8NBZ0 244 aaPredicted RBP3.28□□□□□ -1.88
COL11A1-208ENST00000470170 OR1F12Q8NHA8 337 aa3.28□□□□□ -1.88
COL11A1-208ENST00000470170 CCDC26Q8TAB7 109 aa3.28□□□□□ -1.88
COL11A1-208ENST00000470170 TEX47Q8TBZ9 253 aa3.28□□□□□ -1.88
COL11A1-208ENST00000470170 PHOSPHO2Q8TCD6 241 aa3.28□□□□□ -1.88
COL11A1-208ENST00000470170 ESR2Q92731 530 aa3.28□□□□□ -1.88
COL11A1-208ENST00000470170 PELI1Q96FA3 418 aa3.28□□□□□ -1.88
COL11A1-208ENST00000470170 DNAJC1Q96KC8 554 aaKnown RBP3.28□□□□□ -1.88
COL11A1-208ENST00000470170 C9orf72Q96LT7 481 aa3.28□□□□□ -1.88
COL11A1-208ENST00000470170 CSPG4P5Q96PW8 444 aa3.28□□□□□ -1.88
COL11A1-208ENST00000470170 SLC38A2Q96QD8 506 aa3.28□□□□□ -1.88
COL11A1-208ENST00000470170 P2RY13Q9BPV8 354 aa3.28□□□□□ -1.88
COL11A1-208ENST00000470170 ZNF251Q9BRH9 671 aa3.28□□□□□ -1.88
COL11A1-208ENST00000470170 DUSP16Q9BY84 665 aa3.28□□□□□ -1.88
COL11A1-208ENST00000470170 SRRQ9GZT4 340 aa3.28□□□□□ -1.88
COL11A1-208ENST00000470170 MRPL40Q9NQ50 206 aaKnown RBP3.28□□□□□ -1.88
COL11A1-208ENST00000470170 OR2S2Q9NQN1 319 aa3.28□□□□□ -1.88
COL11A1-208ENST00000470170 PAQR5Q9NXK6 330 aaPredicted RBP3.28□□□□□ -1.88
COL11A1-208ENST00000470170 CD274Q9NZQ7 290 aa3.28□□□□□ -1.88
COL11A1-208ENST00000470170 PRPF19Q9UMS4 504 aaKnown RBP3.28□□□□□ -1.88
COL11A1-208ENST00000470170 NPIPA1Q9UND3 350 aa3.28□□□□□ -1.88
COL11A1-208ENST00000470170 PLLPQ9Y342 182 aa3.28□□□□□ -1.88
COL11A1-208ENST00000470170 ZNF175Q9Y473 711 aa3.28□□□□□ -1.88
COL11A1-208ENST00000470170 RNF115Q9Y4L5 304 aa3.28□□□□□ -1.88
COL11A1-208ENST00000470170 PEX16Q9Y5Y5 336 aa3.28□□□□□ -1.88
COL11A1-208ENST00000470170 URGCP-MRPS24S4R325 110 aa3.28□□□□□ -1.88
COL11A1-208ENST00000470170 AFF2P51816 1311 aa3.27□□□□□ -1.89
COL11A1-208ENST00000470170 KCNE1BA0A087WTH5 132 aa3.27□□□□□ -1.89
COL11A1-208ENST00000470170 A0A1W2PPE3 182 aa3.27□□□□□ -1.89
COL11A1-208ENST00000470170 A0A1W2PRD5 423 aa3.27□□□□□ -1.89
COL11A1-208ENST00000470170 TMEM213A2RRL7 107 aa3.27□□□□□ -1.89
COL11A1-208ENST00000470170 FABP12A6NFH5 140 aa3.27□□□□□ -1.89
COL11A1-208ENST00000470170 YJEFN3A6XGL0 299 aa3.27□□□□□ -1.89
COL11A1-208ENST00000470170 G3V3Y1 287 aa3.27□□□□□ -1.89
COL11A1-208ENST00000470170 PRAMEF26H0Y7S4 382 aa3.27□□□□□ -1.89
COL11A1-208ENST00000470170 M0R3G1 203 aa3.27□□□□□ -1.89
COL11A1-208ENST00000470170 CYB561D2O14569 222 aa3.27□□□□□ -1.89
COL11A1-208ENST00000470170 RFXANKO14593 260 aa3.27□□□□□ -1.89
COL11A1-208ENST00000470170 EMC8O43402 210 aa3.27□□□□□ -1.89
COL11A1-208ENST00000470170 SERF1AO75920 110 aa3.27□□□□□ -1.89
COL11A1-208ENST00000470170 STK17BO94768 372 aa3.27□□□□□ -1.89
COL11A1-208ENST00000470170 LRATO95237 230 aa3.27□□□□□ -1.89
COL11A1-208ENST00000470170 VAPBO95292 243 aa3.27□□□□□ -1.89
COL11A1-208ENST00000470170 SLC2A10O95528 541 aa3.27□□□□□ -1.89
COL11A1-208ENST00000470170 ASS1P00966 412 aaKnown RBP3.27□□□□□ -1.89
COL11A1-208ENST00000470170 OAS1P00973 400 aaKnown RBP3.27□□□□□ -1.89
COL11A1-208ENST00000470170 IL6P05231 212 aa3.27□□□□□ -1.89
COL11A1-208ENST00000470170 GOLGA8HP0CJ92 632 aa3.27□□□□□ -1.89
COL11A1-208ENST00000470170 MYL2P10916 166 aa3.27□□□□□ -1.89
COL11A1-208ENST00000470170 MBL2P11226 248 aaPredicted RBP3.27□□□□□ -1.89
COL11A1-208ENST00000470170 PMCHP20382 165 aa3.27□□□□□ -1.89
COL11A1-208ENST00000470170 PSMB1P20618 241 aaKnown RBP3.27□□□□□ -1.89
COL11A1-208ENST00000470170 CNR1P21554 472 aa3.27□□□□□ -1.89
COL11A1-208ENST00000470170 CD1CP29017 333 aa3.27□□□□□ -1.89
COL11A1-208ENST00000470170 RPL13AP40429 203 aaKnown RBP3.27□□□□□ -1.89
COL11A1-208ENST00000470170 ACTR1BP42025 376 aa3.27□□□□□ -1.89
COL11A1-208ENST00000470170 HTR5AP47898 357 aa3.27□□□□□ -1.89
COL11A1-208ENST00000470170 MRPL19P49406 292 aaKnown RBP3.27□□□□□ -1.89
COL11A1-208ENST00000470170 STK19P49842 368 aaPredicted RBP3.27□□□□□ -1.89
COL11A1-208ENST00000470170 DUSP3P51452 185 aaPredicted RBP3.27□□□□□ -1.89
COL11A1-208ENST00000470170 MNAT1P51948 309 aa3.27□□□□□ -1.89
COL11A1-208ENST00000470170 KCNJ2P63252 427 aa3.27□□□□□ -1.89
COL11A1-208ENST00000470170 LCN2P80188 198 aa3.27□□□□□ -1.89
COL11A1-208ENST00000470170 SIGLEC14Q08ET2 396 aa3.27□□□□□ -1.89
COL11A1-208ENST00000470170 GGTA1PQ4G0N0 100 aa3.27□□□□□ -1.89
COL11A1-208ENST00000470170 TCHHL1Q5QJ38 904 aaPredicted RBP3.27□□□□□ -1.89
COL11A1-208ENST00000470170 DDI2Q5TDH0 399 aa3.27□□□□□ -1.89
COL11A1-208ENST00000470170 C9orf135Q5VTT2 229 aa3.27□□□□□ -1.89
COL11A1-208ENST00000470170 GPR107Q5VW38 600 aa3.27□□□□□ -1.89
COL11A1-208ENST00000470170 THOC7Q6I9Y2 204 aaKnown RBP3.27□□□□□ -1.89
COL11A1-208ENST00000470170 CLEC18BQ6UXF7 455 aa3.27□□□□□ -1.89
COL11A1-208ENST00000470170 ADAMTSL5Q6ZMM2 481 aa3.27□□□□□ -1.89
COL11A1-208ENST00000470170 LRRC74BQ6ZQY2 392 aa3.27□□□□□ -1.89
COL11A1-208ENST00000470170 USP50Q70EL3 339 aaPredicted RBP3.27□□□□□ -1.89
COL11A1-208ENST00000470170 ASRGL1Q7L266 308 aa3.27□□□□□ -1.89
COL11A1-208ENST00000470170 ZNF546Q86UE3 836 aa3.27□□□□□ -1.89
COL11A1-208ENST00000470170 RANBP3LQ86VV4 465 aaPredicted RBP3.27□□□□□ -1.89
COL11A1-208ENST00000470170 CRLF3Q8IUI8 442 aa3.27□□□□□ -1.89
COL11A1-208ENST00000470170 C8orf31Q8N9H6 132 aa3.27□□□□□ -1.89
COL11A1-208ENST00000470170 CYB561A3Q8NBI2 242 aa3.27□□□□□ -1.89
COL11A1-208ENST00000470170 OR4A4PQ8NGN8 299 aa3.27□□□□□ -1.89
COL11A1-208ENST00000470170 OR1L6Q8NGR2 347 aa3.27□□□□□ -1.89
COL11A1-208ENST00000470170 NANPQ8TBE9 248 aa3.27□□□□□ -1.89
COL11A1-208ENST00000470170 P3H4Q92791 437 aa3.27□□□□□ -1.89
COL11A1-208ENST00000470170 CCDC127Q96BQ5 260 aa3.27□□□□□ -1.89
COL11A1-208ENST00000470170 UPRTQ96BW1 309 aa3.27□□□□□ -1.89
COL11A1-208ENST00000470170 OPALINQ96PE5 141 aa3.27□□□□□ -1.89
COL11A1-208ENST00000470170 TSSK3Q96PN8 268 aa3.27□□□□□ -1.89
COL11A1-208ENST00000470170 SH3GL3Q99963 347 aa3.27□□□□□ -1.89
COL11A1-208ENST00000470170 FAM173AQ9BQD7 235 aa3.27□□□□□ -1.89
COL11A1-208ENST00000470170 NAT9Q9BTE0 207 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms