RNA–Protein interactions for RNA: ENST00000469778.1

SPTLC1-204, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 2

Gene SPTLC1, Length 490 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-204ENST00000469778 CENPAP49450 140 aa11.11□□□□□ -0.63
SPTLC1-204ENST00000469778 DAZAP2Q15038 168 aaPredicted RBP11.11□□□□□ -0.63
SPTLC1-204ENST00000469778 GABRA6Q16445 453 aa11.11□□□□□ -0.63
SPTLC1-204ENST00000469778 KDM4DQ6B0I6 523 aa11.11□□□□□ -0.63
SPTLC1-204ENST00000469778 LRFN4Q6PJG9 635 aa11.11□□□□□ -0.63
SPTLC1-204ENST00000469778 DNM1P34Q6PK57 102 aa11.11□□□□□ -0.63
SPTLC1-204ENST00000469778 THSD4Q6ZMP0 1018 aa11.11□□□□□ -0.63
SPTLC1-204ENST00000469778 ZNF771Q7L3S4 317 aaPredicted RBP11.11□□□□□ -0.63
SPTLC1-204ENST00000469778 FAM169BQ8N8A8 192 aa11.11□□□□□ -0.63
SPTLC1-204ENST00000469778 NOXO1Q8NFA2 376 aa11.11□□□□□ -0.63
SPTLC1-204ENST00000469778 MCHR2Q969V1 340 aa11.11□□□□□ -0.63
SPTLC1-204ENST00000469778 Q96M85 177 aa11.11□□□□□ -0.63
SPTLC1-204ENST00000469778 ERMAPQ96PL5 475 aaPredicted RBP11.11□□□□□ -0.63
SPTLC1-204ENST00000469778 MED18Q9BUE0 208 aa11.11□□□□□ -0.63
SPTLC1-204ENST00000469778 TSSK6Q9BXA6 273 aa11.11□□□□□ -0.63
SPTLC1-204ENST00000469778 ACTR6Q9GZN1 396 aa11.11□□□□□ -0.63
SPTLC1-204ENST00000469778 SEMA6AQ9H2E6 1030 aa11.11□□□□□ -0.63
SPTLC1-204ENST00000469778 KRT84Q9NSB2 600 aa11.11□□□□□ -0.63
SPTLC1-204ENST00000469778 TBC1D23Q9NUY8 699 aa11.11□□□□□ -0.63
SPTLC1-204ENST00000469778 VSX1Q9NZR4 365 aaPredicted RBP11.11□□□□□ -0.63
SPTLC1-204ENST00000469778 KLHL21Q9UJP4 597 aa11.11□□□□□ -0.63
SPTLC1-204ENST00000469778 AMDHD2Q9Y303 409 aa11.11□□□□□ -0.63
SPTLC1-204ENST00000469778 SLC22A23A1A5C7 686 aa11.1□□□□□ -0.63
SPTLC1-204ENST00000469778 SH3D21A4FU49 640 aa11.1□□□□□ -0.63
SPTLC1-204ENST00000469778 H0YHG0 523 aa11.1□□□□□ -0.63
SPTLC1-204ENST00000469778 BHLHE40O14503 412 aa11.1□□□□□ -0.63
SPTLC1-204ENST00000469778 FARS2O95363 451 aaKnown RBP11.1□□□□□ -0.63
SPTLC1-204ENST00000469778 BAG2O95816 211 aa11.1□□□□□ -0.63
SPTLC1-204ENST00000469778 WNT11O96014 354 aa11.1□□□□□ -0.63
SPTLC1-204ENST00000469778 EDNRAP25101 427 aa11.1□□□□□ -0.63
SPTLC1-204ENST00000469778 GRK5P34947 590 aa11.1□□□□□ -0.63
SPTLC1-204ENST00000469778 DAPP51397 102 aa11.1□□□□□ -0.63
SPTLC1-204ENST00000469778 BLVRAP53004 296 aa11.1□□□□□ -0.63
SPTLC1-204ENST00000469778 RAD23AP54725 363 aa11.1□□□□□ -0.63
SPTLC1-204ENST00000469778 ELF3P78545 371 aaPredicted RBP11.1□□□□□ -0.63
SPTLC1-204ENST00000469778 MRPS34P82930 218 aaKnown RBP11.1□□□□□ -0.63
SPTLC1-204ENST00000469778 PPP2R2BQ00005 443 aa11.1□□□□□ -0.63
SPTLC1-204ENST00000469778 MYBPC1Q00872 1141 aa11.1□□□□□ -0.63
SPTLC1-204ENST00000469778 TOP3AQ13472 1001 aaPredicted RBP11.1□□□□□ -0.63
SPTLC1-204ENST00000469778 KRR1Q13601 381 aaKnown RBP11.1□□□□□ -0.63
SPTLC1-204ENST00000469778 MELKQ14680 651 aa11.1□□□□□ -0.63
SPTLC1-204ENST00000469778 CEACAM16Q2WEN9 425 aa11.1□□□□□ -0.63
SPTLC1-204ENST00000469778 SLC36A3Q495N2 470 aa11.1□□□□□ -0.63
SPTLC1-204ENST00000469778 CARD17Q5XLA6 110 aa11.1□□□□□ -0.63
SPTLC1-204ENST00000469778 KLHL24Q6TFL4 600 aa11.1□□□□□ -0.63
SPTLC1-204ENST00000469778 MEX3BQ6ZN04 569 aaKnown RBP11.1□□□□□ -0.63
SPTLC1-204ENST00000469778 IGFN1Q86VF2 1251 aa11.1□□□□□ -0.63
SPTLC1-204ENST00000469778 JAZF1Q86VZ6 243 aa11.1□□□□□ -0.63
SPTLC1-204ENST00000469778 HS3ST5Q8IZT8 346 aa11.1□□□□□ -0.63
SPTLC1-204ENST00000469778 ICA1LQ8NDH6 482 aa11.1□□□□□ -0.63
SPTLC1-204ENST00000469778 OR1K1Q8NGR3 316 aa11.1□□□□□ -0.63
SPTLC1-204ENST00000469778 HDAC2Q92769 488 aaKnown RBP11.1□□□□□ -0.63
SPTLC1-204ENST00000469778 BCL2L2Q92843 193 aaPredicted RBP11.1□□□□□ -0.63
SPTLC1-204ENST00000469778 EME1Q96AY2 570 aa11.1□□□□□ -0.63
SPTLC1-204ENST00000469778 S100PBPQ96BU1 408 aa11.1□□□□□ -0.63
SPTLC1-204ENST00000469778 NMD3Q96D46 503 aaKnown RBP11.1□□□□□ -0.63
SPTLC1-204ENST00000469778 EGLN3Q9H6Z9 239 aa11.1□□□□□ -0.63
SPTLC1-204ENST00000469778 USE1Q9NZ43 259 aa11.1□□□□□ -0.63
SPTLC1-204ENST00000469778 FBXL3Q9UKT7 428 aa11.1□□□□□ -0.63
SPTLC1-204ENST00000469778 ADAM18Q9Y3Q7 739 aa11.1□□□□□ -0.63
SPTLC1-204ENST00000469778 CACNA1CQ13936 2221 aa11.1□□□□□ -0.63
SPTLC1-204ENST00000469778 ARPC4-TTLL3A0A0A6YYG9 625 aa11.09□□□□□ -0.63
SPTLC1-204ENST00000469778 TEX13CA0A0J9YWL9 993 aa11.09□□□□□ -0.63
SPTLC1-204ENST00000469778 A1L4Q6 167 aa11.09□□□□□ -0.63
SPTLC1-204ENST00000469778 RIIAD1A6NNX1 92 aa11.09□□□□□ -0.63
SPTLC1-204ENST00000469778 LYZL6O75951 148 aa11.09□□□□□ -0.63
SPTLC1-204ENST00000469778 PPP1R3DO95685 299 aa11.09□□□□□ -0.63
SPTLC1-204ENST00000469778 TP53P04637 393 aaPredicted RBP11.09□□□□□ -0.63
SPTLC1-204ENST00000469778 ALPLP05186 524 aa11.09□□□□□ -0.63
SPTLC1-204ENST00000469778 OR8G3PP0DMU2 310 aa11.09□□□□□ -0.63
SPTLC1-204ENST00000469778 ANPEPP15144 967 aa11.09□□□□□ -0.63
SPTLC1-204ENST00000469778 IGFBP5P24593 272 aa11.09□□□□□ -0.63
SPTLC1-204ENST00000469778 ALDH3A2P51648 485 aa11.09□□□□□ -0.63
SPTLC1-204ENST00000469778 CRISP1P54107 249 aa11.09□□□□□ -0.63
SPTLC1-204ENST00000469778 ARF1P84077 181 aaKnown RBP11.09□□□□□ -0.63
SPTLC1-204ENST00000469778 CDK5Q00535 292 aa11.09□□□□□ -0.63
SPTLC1-204ENST00000469778 RUNX1T1Q06455 604 aa11.09□□□□□ -0.63
SPTLC1-204ENST00000469778 CD47Q08722 323 aa11.09□□□□□ -0.63
SPTLC1-204ENST00000469778 DAG1Q14118 895 aa11.09□□□□□ -0.63
SPTLC1-204ENST00000469778 C3orf36Q3SXR2 165 aa11.09□□□□□ -0.63
SPTLC1-204ENST00000469778 SLC25A47Q6Q0C1 308 aa11.09□□□□□ -0.63
SPTLC1-204ENST00000469778 ZBTB49Q6ZSB9 765 aa11.09□□□□□ -0.63
SPTLC1-204ENST00000469778 PACRGLQ8N7B6 248 aa11.09□□□□□ -0.63
SPTLC1-204ENST00000469778 SYT14Q8NB59 555 aa11.09□□□□□ -0.63
SPTLC1-204ENST00000469778 NANOS1Q8WY41 292 aaKnown RBP11.09□□□□□ -0.63
SPTLC1-204ENST00000469778 RDH12Q96NR8 316 aa11.09□□□□□ -0.63
SPTLC1-204ENST00000469778 WFIKKN1Q96NZ8 548 aa11.09□□□□□ -0.63
SPTLC1-204ENST00000469778 ALKBH3Q96Q83 286 aaPredicted RBP11.09□□□□□ -0.63
SPTLC1-204ENST00000469778 SLC38A2Q96QD8 506 aa11.09□□□□□ -0.63
SPTLC1-204ENST00000469778 SIAEQ9HAT2 523 aa11.09□□□□□ -0.63
SPTLC1-204ENST00000469778 SLC25A19Q9HC21 320 aa11.09□□□□□ -0.63
SPTLC1-204ENST00000469778 IL20RAQ9UHF4 553 aa11.09□□□□□ -0.63
SPTLC1-204ENST00000469778 COL12A1Q99715 3063 aa11.09□□□□□ -0.63
SPTLC1-204ENST00000469778 ALPK2Q86TB3 2170 aa11.09□□□□□ -0.63
SPTLC1-204ENST00000469778 HCFC1P51610 2035 aa11.08□□□□□ -0.64
SPTLC1-204ENST00000469778 ANKRD65E5RJM6 399 aa11.08□□□□□ -0.64
SPTLC1-204ENST00000469778 C19orf84I3L1E1 186 aa11.08□□□□□ -0.64
SPTLC1-204ENST00000469778 SOCS2O14508 198 aa11.08□□□□□ -0.64
SPTLC1-204ENST00000469778 KHDRBS3O75525 346 aaKnown RBP11.08□□□□□ -0.64
SPTLC1-204ENST00000469778 HIST1H1CP16403 213 aaKnown RBP11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 92.2 ms