RNA–Protein interactions for RNA: ENST00000469687.2

CBWD3-205, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 2,195 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-205ENST00000469687 THAP3Q8WTV1 239 aaPredicted RBP13.25□□□□□ -0.29
CBWD3-205ENST00000469687 GON7Q9BXV9 100 aa13.25□□□□□ -0.29
CBWD3-205ENST00000469687 HRASLSQ9HDD0 168 aa13.25□□□□□ -0.29
CBWD3-205ENST00000469687 ZFP64Q9NPA5 681 aa13.25□□□□□ -0.29
CBWD3-205ENST00000469687 MRPL22Q9NWU5 206 aaKnown RBP13.25□□□□□ -0.29
CBWD3-205ENST00000469687 PRSS37A4D1T9 235 aa13.24□□□□□ -0.29
CBWD3-205ENST00000469687 XKRYO14609 159 aa13.24□□□□□ -0.29
CBWD3-205ENST00000469687 EIF4E2O60573 245 aaKnown RBP13.24□□□□□ -0.29
CBWD3-205ENST00000469687 NPIPB7O75200 414 aa13.24□□□□□ -0.29
CBWD3-205ENST00000469687 CTLA4P16410 223 aa13.24□□□□□ -0.29
CBWD3-205ENST00000469687 PI4KAP42356 2102 aa13.24□□□□□ -0.29
CBWD3-205ENST00000469687 CCR9P51686 369 aa13.24□□□□□ -0.29
CBWD3-205ENST00000469687 PNLIPRP2P54317 469 aa13.24□□□□□ -0.29
CBWD3-205ENST00000469687 EGR3Q06889 387 aa13.24□□□□□ -0.29
CBWD3-205ENST00000469687 DYRK1AQ13627 763 aa13.24□□□□□ -0.29
CBWD3-205ENST00000469687 SGCBQ16585 318 aa13.24□□□□□ -0.29
CBWD3-205ENST00000469687 BTN2A1Q7KYR7 527 aa13.24□□□□□ -0.29
CBWD3-205ENST00000469687 MAMDC2Q7Z304 686 aaPredicted RBP13.24□□□□□ -0.29
CBWD3-205ENST00000469687 MDGA2Q7Z553 956 aa13.24□□□□□ -0.29
CBWD3-205ENST00000469687 DND1Q8IYX4 353 aaKnown RBP13.24□□□□□ -0.29
CBWD3-205ENST00000469687 C9orf62Q8N4C0 152 aa13.24□□□□□ -0.29
CBWD3-205ENST00000469687 OR11H4Q8NGC9 324 aa13.24□□□□□ -0.29
CBWD3-205ENST00000469687 ZNF519Q8TB69 540 aa13.24□□□□□ -0.29
CBWD3-205ENST00000469687 PIGKQ92643 395 aa13.24□□□□□ -0.29
CBWD3-205ENST00000469687 DACT3Q96B18 629 aaPredicted RBP13.24□□□□□ -0.29
CBWD3-205ENST00000469687 CMTM3Q96MX0 182 aa13.24□□□□□ -0.29
CBWD3-205ENST00000469687 C20orf85Q9H1P6 137 aa13.24□□□□□ -0.29
CBWD3-205ENST00000469687 KCNK15Q9H427 330 aa13.24□□□□□ -0.29
CBWD3-205ENST00000469687 ATXN7L1Q9ULK2 861 aaPredicted RBP13.24□□□□□ -0.29
CBWD3-205ENST00000469687 CACNA1EQ15878 2313 aa13.24□□□□□ -0.29
CBWD3-205ENST00000469687 SLC16A7O60669 478 aa13.24□□□□□ -0.29
CBWD3-205ENST00000469687 ZNF254O75437 659 aa13.24□□□□□ -0.29
CBWD3-205ENST00000469687 PNPP00491 289 aa13.24□□□□□ -0.29
CBWD3-205ENST00000469687 HPXP02790 462 aa13.24□□□□□ -0.29
CBWD3-205ENST00000469687 HLA-DOBP13765 273 aa13.24□□□□□ -0.29
CBWD3-205ENST00000469687 P2RX1P51575 399 aa13.24□□□□□ -0.29
CBWD3-205ENST00000469687 RPL27P61353 136 aaKnown RBP13.24□□□□□ -0.29
CBWD3-205ENST00000469687 GPLD1P80108 840 aa13.24□□□□□ -0.29
CBWD3-205ENST00000469687 TMEM69Q5SWH9 247 aa13.24□□□□□ -0.29
CBWD3-205ENST00000469687 FAM69AQ5T7M9 428 aa13.24□□□□□ -0.29
CBWD3-205ENST00000469687 C1orf140Q5VVS0 124 aa13.24□□□□□ -0.29
CBWD3-205ENST00000469687 SLC22A10Q63ZE4 541 aa13.24□□□□□ -0.29
CBWD3-205ENST00000469687 GLB1L2Q8IW92 636 aa13.24□□□□□ -0.29
CBWD3-205ENST00000469687 SLC38A9Q8NBW4 561 aa13.24□□□□□ -0.29
CBWD3-205ENST00000469687 OR11G2Q8NGC1 345 aa13.24□□□□□ -0.29
CBWD3-205ENST00000469687 OR2M2Q96R28 347 aa13.24□□□□□ -0.29
CBWD3-205ENST00000469687 DUSP15Q9H1R2 295 aaPredicted RBP13.24□□□□□ -0.29
CBWD3-205ENST00000469687 ELOVL3Q9HB03 270 aa13.24□□□□□ -0.29
CBWD3-205ENST00000469687 SLC22A13Q9Y226 551 aa13.24□□□□□ -0.29
CBWD3-205ENST00000469687 FKBP7Q9Y680 259 aa13.24□□□□□ -0.29
CBWD3-205ENST00000469687 TRBV5-7A0A0A0MS05 114 aa13.23□□□□□ -0.29
CBWD3-205ENST00000469687 CENPBD1B2RD01 187 aa13.23□□□□□ -0.29
CBWD3-205ENST00000469687 GABARAPH6UMI1 98 aa13.23□□□□□ -0.29
CBWD3-205ENST00000469687 ERVH48-1M5A8F1 160 aa13.23□□□□□ -0.29
CBWD3-205ENST00000469687 BCAT2O15382 392 aaPredicted RBP13.23□□□□□ -0.29
CBWD3-205ENST00000469687 MAPK3P27361 379 aaPredicted RBP13.23□□□□□ -0.29
CBWD3-205ENST00000469687 HTR2BP41595 481 aa13.23□□□□□ -0.29
CBWD3-205ENST00000469687 POLR2HP52434 150 aaKnown RBP13.23□□□□□ -0.29
CBWD3-205ENST00000469687 COL28A1Q2UY09 1125 aa13.23□□□□□ -0.29
CBWD3-205ENST00000469687 LYPD8Q6UX82 237 aa13.23□□□□□ -0.29
CBWD3-205ENST00000469687 WDFY1Q8IWB7 410 aa13.23□□□□□ -0.29
CBWD3-205ENST00000469687 SDR16C5Q8N3Y7 309 aa13.23□□□□□ -0.29
CBWD3-205ENST00000469687 ZNF417Q8TAU3 575 aa13.23□□□□□ -0.29
CBWD3-205ENST00000469687 HAVCR1Q96D42 359 aa13.23□□□□□ -0.29
CBWD3-205ENST00000469687 C4orf45Q96LM5 186 aa13.23□□□□□ -0.29
CBWD3-205ENST00000469687 ZNF587Q96SQ5 575 aaPredicted RBP13.23□□□□□ -0.29
CBWD3-205ENST00000469687 NDEL1Q9GZM8 345 aa13.23□□□□□ -0.29
CBWD3-205ENST00000469687 SLITRK2Q9H156 845 aa13.23□□□□□ -0.29
CBWD3-205ENST00000469687 PLEKHA1Q9HB21 404 aa13.23□□□□□ -0.29
CBWD3-205ENST00000469687 TAS2R10Q9NYW0 307 aa13.23□□□□□ -0.29
CBWD3-205ENST00000469687 COPZ2Q9P299 210 aa13.23□□□□□ -0.29
CBWD3-205ENST00000469687 MUC3AQ02505 3323 aa13.23□□□□□ -0.29
CBWD3-205ENST00000469687 TRIOBPQ9H2D6 2365 aa13.23□□□□□ -0.29
CBWD3-205ENST00000469687 COL6A3P12111 3177 aa13.23□□□□□ -0.29
CBWD3-205ENST00000469687 TMEM212A6NML5 194 aa13.22□□□□□ -0.29
CBWD3-205ENST00000469687 ANXA2P2A6NMY6 339 aa13.22□□□□□ -0.29
CBWD3-205ENST00000469687 MPZL1O95297 269 aa13.22□□□□□ -0.29
CBWD3-205ENST00000469687 TIAF1O95411 115 aa13.22□□□□□ -0.29
CBWD3-205ENST00000469687 ANXA2P07355 339 aaKnown RBP13.22□□□□□ -0.29
CBWD3-205ENST00000469687 SPARCP09486 303 aa13.22□□□□□ -0.29
CBWD3-205ENST00000469687 CALCBP10092 127 aa13.22□□□□□ -0.29
CBWD3-205ENST00000469687 DCTDP32321 178 aa13.22□□□□□ -0.29
CBWD3-205ENST00000469687 FBXW4P57775 412 aa13.22□□□□□ -0.29
CBWD3-205ENST00000469687 RNF4P78317 190 aa13.22□□□□□ -0.29
CBWD3-205ENST00000469687 ASPHD2Q6ICH7 369 aa13.22□□□□□ -0.29
CBWD3-205ENST00000469687 SIX5Q8N196 739 aa13.22□□□□□ -0.29
CBWD3-205ENST00000469687 GRPEL2Q8TAA5 225 aa13.22□□□□□ -0.29
CBWD3-205ENST00000469687 STT3BQ8TCJ2 826 aa13.22□□□□□ -0.29
CBWD3-205ENST00000469687 SNAPC3Q92966 411 aa13.22□□□□□ -0.29
CBWD3-205ENST00000469687 MIB2Q96AX9 1013 aa13.22□□□□□ -0.29
CBWD3-205ENST00000469687 S100A16Q96FQ6 103 aaKnown RBP13.22□□□□□ -0.29
CBWD3-205ENST00000469687 HYLS1Q96M11 299 aa13.22□□□□□ -0.29
CBWD3-205ENST00000469687 DCBLD2Q96PD2 775 aa13.22□□□□□ -0.29
CBWD3-205ENST00000469687 OR8B4Q96RC9 309 aa13.22□□□□□ -0.29
CBWD3-205ENST00000469687 C7orf50Q9BRJ6 194 aaKnown RBP13.22□□□□□ -0.29
CBWD3-205ENST00000469687 TRAF4Q9BUZ4 470 aaPredicted RBP13.22□□□□□ -0.29
CBWD3-205ENST00000469687 COMMD4Q9H0A8 199 aa13.22□□□□□ -0.29
CBWD3-205ENST00000469687 PCED1AQ9H1Q7 454 aa13.22□□□□□ -0.29
CBWD3-205ENST00000469687 SEMA5BQ9P283 1151 aa13.22□□□□□ -0.29
CBWD3-205ENST00000469687 KLHL9Q9P2J3 617 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms