RNA–Protein interactions for RNA: ENST00000469232.5

NPHP3-204, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 1,616 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-204ENST00000469232 TEAD3Q99594 435 aa7.23□□□□□ -1.25
NPHP3-204ENST00000469232 ZNF649Q9BS31 505 aa7.23□□□□□ -1.25
NPHP3-204ENST00000469232 LINC00470Q9BZP3 86 aa7.23□□□□□ -1.25
NPHP3-204ENST00000469232 RASSF1Q9NS23 344 aa7.23□□□□□ -1.25
NPHP3-204ENST00000469232 PAK1IP1Q9NWT1 392 aaPredicted RBP7.23□□□□□ -1.25
NPHP3-204ENST00000469232 AASSQ9UDR5 926 aa7.23□□□□□ -1.25
NPHP3-204ENST00000469232 WARS2Q9UGM6 360 aaKnown RBP7.23□□□□□ -1.25
NPHP3-204ENST00000469232 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP7.23□□□□□ -1.25
NPHP3-204ENST00000469232 MOKQ9UQ07 419 aa7.23□□□□□ -1.25
NPHP3-204ENST00000469232 GPR52Q9Y2T5 361 aa7.23□□□□□ -1.25
NPHP3-204ENST00000469232 PCDHGB1Q9Y5G3 927 aa7.23□□□□□ -1.25
NPHP3-204ENST00000469232 ATRXP46100 2492 aa7.23□□□□□ -1.25
NPHP3-204ENST00000469232 IGHV3-15A0A0B4J1V0 119 aa7.23□□□□□ -1.25
NPHP3-204ENST00000469232 MAGEA13PA6NCF6 341 aa7.23□□□□□ -1.25
NPHP3-204ENST00000469232 EFCAB10A6NFE3 127 aa7.23□□□□□ -1.25
NPHP3-204ENST00000469232 SLC22A20A6NK97 555 aa7.23□□□□□ -1.25
NPHP3-204ENST00000469232 SLC22A31A6NKX4 558 aa7.23□□□□□ -1.25
NPHP3-204ENST00000469232 NPIPA2E9PIF3 369 aa7.23□□□□□ -1.25
NPHP3-204ENST00000469232 NPIPA3F8WFD2 350 aa7.23□□□□□ -1.25
NPHP3-204ENST00000469232 RPL36A-HNRNPH2H7BZ11 118 aa7.23□□□□□ -1.25
NPHP3-204ENST00000469232 AKAP8O43823 692 aaKnown RBP7.23□□□□□ -1.25
NPHP3-204ENST00000469232 GLCEO94923 617 aa7.23□□□□□ -1.25
NPHP3-204ENST00000469232 IGHG1P01857 330 aa7.23□□□□□ -1.25
NPHP3-204ENST00000469232 IGHA1P01876 353 aa7.23□□□□□ -1.25
NPHP3-204ENST00000469232 CRHP06850 196 aa7.23□□□□□ -1.25
NPHP3-204ENST00000469232 YES1P07947 543 aa7.23□□□□□ -1.25
NPHP3-204ENST00000469232 SMIM18P0DKX4 95 aa7.23□□□□□ -1.25
NPHP3-204ENST00000469232 DBTP11182 482 aaKnown RBP7.23□□□□□ -1.25
NPHP3-204ENST00000469232 NR2C1P13056 603 aa7.23□□□□□ -1.25
NPHP3-204ENST00000469232 SPI1P17947 270 aa7.23□□□□□ -1.25
NPHP3-204ENST00000469232 PAICSP22234 425 aaKnown RBP7.23□□□□□ -1.25
NPHP3-204ENST00000469232 FMO3P31513 532 aa7.23□□□□□ -1.25
NPHP3-204ENST00000469232 CEACAM8P31997 349 aaPredicted RBP7.23□□□□□ -1.25
NPHP3-204ENST00000469232 BLVRAP53004 296 aa7.23□□□□□ -1.25
NPHP3-204ENST00000469232 BIDP55957 195 aa7.23□□□□□ -1.25
NPHP3-204ENST00000469232 GTF3C1Q12789 2109 aa7.23□□□□□ -1.25
NPHP3-204ENST00000469232 C1DQ13901 141 aaKnown RBP7.23□□□□□ -1.25
NPHP3-204ENST00000469232 IRF3Q14653 427 aa7.23□□□□□ -1.25
NPHP3-204ENST00000469232 KCNMB1Q16558 191 aa7.23□□□□□ -1.25
NPHP3-204ENST00000469232 C3AR1Q16581 482 aa7.23□□□□□ -1.25
NPHP3-204ENST00000469232 THEM4Q5T1C6 240 aa7.23□□□□□ -1.25
NPHP3-204ENST00000469232 GTF2IRD2BQ6EKJ0 949 aa7.23□□□□□ -1.25
NPHP3-204ENST00000469232 PLBD1Q6P4A8 553 aa7.23□□□□□ -1.25
NPHP3-204ENST00000469232 LEG1Q6P5S2 330 aa7.23□□□□□ -1.25
NPHP3-204ENST00000469232 LRFN4Q6PJG9 635 aa7.23□□□□□ -1.25
NPHP3-204ENST00000469232 C19orf48Q6RUI8 117 aa7.23□□□□□ -1.25
NPHP3-204ENST00000469232 SEM1Q6ZVN7 128 aa7.23□□□□□ -1.25
NPHP3-204ENST00000469232 ZNF627Q7L945 461 aa7.23□□□□□ -1.25
NPHP3-204ENST00000469232 GTF2IRD2Q86UP8 949 aa7.23□□□□□ -1.25
NPHP3-204ENST00000469232 OR6V1Q8N148 313 aa7.23□□□□□ -1.25
NPHP3-204ENST00000469232 CYB561A3Q8NBI2 242 aa7.23□□□□□ -1.25
NPHP3-204ENST00000469232 SDR9C7Q8NEX9 313 aa7.23□□□□□ -1.25
NPHP3-204ENST00000469232 NOXO1Q8NFA2 376 aa7.23□□□□□ -1.25
NPHP3-204ENST00000469232 BBS1Q8NFJ9 593 aa7.23□□□□□ -1.25
NPHP3-204ENST00000469232 OR2T4Q8NH00 348 aa7.23□□□□□ -1.25
NPHP3-204ENST00000469232 ABHD3Q8WU67 409 aa7.23□□□□□ -1.25
NPHP3-204ENST00000469232 ZNRF4Q8WWF5 429 aa7.23□□□□□ -1.25
NPHP3-204ENST00000469232 GMPPAQ96IJ6 420 aaPredicted RBP7.23□□□□□ -1.25
NPHP3-204ENST00000469232 BOD1Q96IK1 185 aa7.23□□□□□ -1.25
NPHP3-204ENST00000469232 PLEKHA8Q96JA3 519 aa7.23□□□□□ -1.25
NPHP3-204ENST00000469232 ZFP3Q96NJ6 502 aa7.23□□□□□ -1.25
NPHP3-204ENST00000469232 EXO5Q9H790 373 aa7.23□□□□□ -1.25
NPHP3-204ENST00000469232 CCNB1IP1Q9NPC3 277 aa7.23□□□□□ -1.25
NPHP3-204ENST00000469232 ASF1BQ9NVP2 202 aa7.23□□□□□ -1.25
NPHP3-204ENST00000469232 MED29Q9NX70 200 aa7.23□□□□□ -1.25
NPHP3-204ENST00000469232 DNAJC27Q9NZQ0 273 aa7.23□□□□□ -1.25
NPHP3-204ENST00000469232 EMC3Q9P0I2 261 aa7.23□□□□□ -1.25
NPHP3-204ENST00000469232 BLOC1S6Q9UL45 172 aa7.23□□□□□ -1.25
NPHP3-204ENST00000469232 B9D1Q9UPM9 204 aa7.23□□□□□ -1.25
NPHP3-204ENST00000469232 CAMK2AQ9UQM7 478 aa7.23□□□□□ -1.25
NPHP3-204ENST00000469232 RPL36Q9Y3U8 105 aaKnown RBP7.23□□□□□ -1.25
NPHP3-204ENST00000469232 FAM215AQ9Y5M1 114 aa7.23□□□□□ -1.25
NPHP3-204ENST00000469232 IGSF10Q6WRI0 2623 aa7.23□□□□□ -1.25
NPHP3-204ENST00000469232 SHANK1Q9Y566 2161 aa7.22□□□□□ -1.25
NPHP3-204ENST00000469232 POLEQ07864 2286 aa7.22□□□□□ -1.25
NPHP3-204ENST00000469232 OR6C65A6NJZ3 312 aa7.22□□□□□ -1.25
NPHP3-204ENST00000469232 FAM183AA6NL82 134 aa7.22□□□□□ -1.25
NPHP3-204ENST00000469232 SNTNA6NMZ2 147 aa7.22□□□□□ -1.25
NPHP3-204ENST00000469232 XKRYO14609 159 aa7.22□□□□□ -1.25
NPHP3-204ENST00000469232 ATXN7O15265 892 aaPredicted RBP7.22□□□□□ -1.25
NPHP3-204ENST00000469232 ARHGEF9O43307 516 aa7.22□□□□□ -1.25
NPHP3-204ENST00000469232 XPNPEP2O43895 674 aa7.22□□□□□ -1.25
NPHP3-204ENST00000469232 PLGP00747 810 aaPredicted RBP7.22□□□□□ -1.25
NPHP3-204ENST00000469232 RENP00797 406 aa7.22□□□□□ -1.25
NPHP3-204ENST00000469232 HRGP04196 525 aa7.22□□□□□ -1.25
NPHP3-204ENST00000469232 GAAP10253 952 aa7.22□□□□□ -1.25
NPHP3-204ENST00000469232 CTLA4P16410 223 aa7.22□□□□□ -1.25
NPHP3-204ENST00000469232 CRABP1P29762 137 aa7.22□□□□□ -1.25
NPHP3-204ENST00000469232 TIMP3P35625 211 aa7.22□□□□□ -1.25
NPHP3-204ENST00000469232 MTNR1AP48039 350 aa7.22□□□□□ -1.25
NPHP3-204ENST00000469232 MLLT10P55197 1068 aa7.22□□□□□ -1.25
NPHP3-204ENST00000469232 CLDN17P56750 224 aa7.22□□□□□ -1.25
NPHP3-204ENST00000469232 TUBA4AP68366 448 aa7.22□□□□□ -1.25
NPHP3-204ENST00000469232 SRYQ05066 204 aa7.22□□□□□ -1.25
NPHP3-204ENST00000469232 LGALS3BPQ08380 585 aa7.22□□□□□ -1.25
NPHP3-204ENST00000469232 RAB40BQ12829 278 aa7.22□□□□□ -1.25
NPHP3-204ENST00000469232 MELKQ14680 651 aa7.22□□□□□ -1.25
NPHP3-204ENST00000469232 EIF2S3LQ2VIR3 472 aaKnown RBP7.22□□□□□ -1.25
NPHP3-204ENST00000469232 PRR30Q53SZ7 412 aaPredicted RBP7.22□□□□□ -1.25
NPHP3-204ENST00000469232 TEX30Q5JUR7 227 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms