RNA–Protein interactions for RNA: ENST00000468136.5

MSH5-213, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 690 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-213ENST00000468136 ROM1Q03395 351 aa9.14□□□□□ -0.95
MSH5-213ENST00000468136 Q0VFX4 171 aa9.14□□□□□ -0.95
MSH5-213ENST00000468136 PCK2Q16822 640 aa9.14□□□□□ -0.95
MSH5-213ENST00000468136 RGS21Q2M5E4 152 aa9.14□□□□□ -0.95
MSH5-213ENST00000468136 TMEM176BQ3YBM2 270 aaPredicted RBP9.14□□□□□ -0.95
MSH5-213ENST00000468136 RAET1LQ5VY80 246 aa9.14□□□□□ -0.95
MSH5-213ENST00000468136 TMEM225Q6GV28 225 aa9.14□□□□□ -0.95
MSH5-213ENST00000468136 ARL9Q6T311 187 aa9.14□□□□□ -0.95
MSH5-213ENST00000468136 B3GLCTQ6Y288 498 aa9.14□□□□□ -0.95
MSH5-213ENST00000468136 CCDC190Q86UF4 302 aa9.14□□□□□ -0.95
MSH5-213ENST00000468136 DEFB124Q8NES8 71 aa9.14□□□□□ -0.95
MSH5-213ENST00000468136 OR6N2Q8NGY6 317 aa9.14□□□□□ -0.95
MSH5-213ENST00000468136 PSMF1Q92530 271 aa9.14□□□□□ -0.95
MSH5-213ENST00000468136 TMEM203Q969S6 136 aa9.14□□□□□ -0.95
MSH5-213ENST00000468136 SLC25A44Q96H78 314 aaPredicted RBP9.14□□□□□ -0.95
MSH5-213ENST00000468136 PGLYRP3Q96LB9 341 aa9.14□□□□□ -0.95
MSH5-213ENST00000468136 CMTM3Q96MX0 182 aa9.14□□□□□ -0.95
MSH5-213ENST00000468136 SLC30A2Q9BRI3 323 aa9.14□□□□□ -0.95
MSH5-213ENST00000468136 MROQ9BYG7 248 aa9.14□□□□□ -0.95
MSH5-213ENST00000468136 COMMD4Q9H0A8 199 aa9.14□□□□□ -0.95
MSH5-213ENST00000468136 PROK2Q9HC23 129 aa9.14□□□□□ -0.95
MSH5-213ENST00000468136 SMURF1Q9HCE7 757 aa9.14□□□□□ -0.95
MSH5-213ENST00000468136 PAQR5Q9NXK6 330 aaPredicted RBP9.14□□□□□ -0.95
MSH5-213ENST00000468136 GNG8Q9UK08 70 aa9.14□□□□□ -0.95
MSH5-213ENST00000468136 ZNF281Q9Y2X9 895 aa9.14□□□□□ -0.95
MSH5-213ENST00000468136 CMAHPQ9Y471 501 aa9.14□□□□□ -0.95
MSH5-213ENST00000468136 LOC101059948A0A1B0GTJ6 334 aa9.13□□□□□ -0.95
MSH5-213ENST00000468136 OR2M5A3KFT3 312 aa9.13□□□□□ -0.95
MSH5-213ENST00000468136 ZNF726A6NNF4 738 aa9.13□□□□□ -0.95
MSH5-213ENST00000468136 C17orf51A8MQB3 221 aa9.13□□□□□ -0.95
MSH5-213ENST00000468136 B4DXG7 233 aa9.13□□□□□ -0.95
MSH5-213ENST00000468136 EFNA2O43921 213 aa9.13□□□□□ -0.95
MSH5-213ENST00000468136 SLC19A2O60779 497 aa9.13□□□□□ -0.95
MSH5-213ENST00000468136 HLA-DQA2P01906 255 aa9.13□□□□□ -0.95
MSH5-213ENST00000468136 LIPCP11150 499 aa9.13□□□□□ -0.95
MSH5-213ENST00000468136 BMP4P12644 408 aa9.13□□□□□ -0.95
MSH5-213ENST00000468136 PTGS2P35354 604 aa9.13□□□□□ -0.95
MSH5-213ENST00000468136 CD79BP40259 229 aa9.13□□□□□ -0.95
MSH5-213ENST00000468136 H3F3AP84243 136 aa9.13□□□□□ -0.95
MSH5-213ENST00000468136 OC90Q02509 493 aaPredicted RBP9.13□□□□□ -0.95
MSH5-213ENST00000468136 HNRNPA0Q13151 305 aaKnown RBP9.13□□□□□ -0.95
MSH5-213ENST00000468136 ALKBH1Q13686 389 aaKnown RBP9.13□□□□□ -0.95
MSH5-213ENST00000468136 DOC2BQ14184 412 aa9.13□□□□□ -0.95
MSH5-213ENST00000468136 ACSM3Q53FZ2 586 aa9.13□□□□□ -0.95
MSH5-213ENST00000468136 SOWAHCQ53LP3 525 aaPredicted RBP9.13□□□□□ -0.95
MSH5-213ENST00000468136 HBMQ6B0K9 141 aa9.13□□□□□ -0.95
MSH5-213ENST00000468136 VASNQ6EMK4 673 aa9.13□□□□□ -0.95
MSH5-213ENST00000468136 UNQ9370/PRO34162Q6UXP9 181 aa9.13□□□□□ -0.95
MSH5-213ENST00000468136 NHLRC1Q6VVB1 395 aa9.13□□□□□ -0.95
MSH5-213ENST00000468136 TMEM91Q6ZNR0 172 aa9.13□□□□□ -0.95
MSH5-213ENST00000468136 ESPNLQ6ZVH7 1005 aa9.13□□□□□ -0.95
MSH5-213ENST00000468136 GLB1L2Q8IW92 636 aa9.13□□□□□ -0.95
MSH5-213ENST00000468136 ZNF679Q8IYX0 411 aa9.13□□□□□ -0.95
MSH5-213ENST00000468136 BEST3Q8N1M1 668 aa9.13□□□□□ -0.95
MSH5-213ENST00000468136 ZNF511Q8NB15 262 aa9.13□□□□□ -0.95
MSH5-213ENST00000468136 OR51L1Q8NGJ5 315 aa9.13□□□□□ -0.95
MSH5-213ENST00000468136 ZPLD1Q8TCW7 415 aa9.13□□□□□ -0.95
MSH5-213ENST00000468136 ADAMTS14Q8WXS8 1223 aa9.13□□□□□ -0.95
MSH5-213ENST00000468136 GHSRQ92847 366 aa9.13□□□□□ -0.95
MSH5-213ENST00000468136 TRMT61AQ96FX7 289 aaKnown RBP9.13□□□□□ -0.95
MSH5-213ENST00000468136 OR8B4Q96RC9 309 aa9.13□□□□□ -0.95
MSH5-213ENST00000468136 HDHD5Q9BXW7 423 aa9.13□□□□□ -0.95
MSH5-213ENST00000468136 MRPL13Q9BYD1 178 aaKnown RBP9.13□□□□□ -0.95
MSH5-213ENST00000468136 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.13□□□□□ -0.95
MSH5-213ENST00000468136 SLITRK2Q9H156 845 aa9.13□□□□□ -0.95
MSH5-213ENST00000468136 NIPAL2Q9H841 368 aa9.13□□□□□ -0.95
MSH5-213ENST00000468136 LRFN1Q9P244 771 aa9.13□□□□□ -0.95
MSH5-213ENST00000468136 COPS3Q9UNS2 423 aa9.13□□□□□ -0.95
MSH5-213ENST00000468136 KLF13Q9Y2Y9 288 aaPredicted RBP9.13□□□□□ -0.95
MSH5-213ENST00000468136 LOC105378220A0A1B0GUY1 285 aaPredicted RBP9.12□□□□□ -0.95
MSH5-213ENST00000468136 PROB1E7EW31 1015 aa9.12□□□□□ -0.95
MSH5-213ENST00000468136 ZNF593O00488 134 aaPredicted RBP9.12□□□□□ -0.95
MSH5-213ENST00000468136 AKR7A3O95154 331 aa9.12□□□□□ -0.95
MSH5-213ENST00000468136 ABHD16AO95870 558 aa9.12□□□□□ -0.95
MSH5-213ENST00000468136 PLGP00747 810 aaPredicted RBP9.12□□□□□ -0.95
MSH5-213ENST00000468136 UCHL1P09936 223 aa9.12□□□□□ -0.95
MSH5-213ENST00000468136 CTLA4P16410 223 aa9.12□□□□□ -0.95
MSH5-213ENST00000468136 ITGA3P26006 1051 aa9.12□□□□□ -0.95
MSH5-213ENST00000468136 TGFBR1P36897 503 aa9.12□□□□□ -0.95
MSH5-213ENST00000468136 GUCA1AP43080 201 aaPredicted RBP9.12□□□□□ -0.95
MSH5-213ENST00000468136 P2RY4P51582 365 aa9.12□□□□□ -0.95
MSH5-213ENST00000468136 ZNF133P52736 654 aaPredicted RBP9.12□□□□□ -0.95
MSH5-213ENST00000468136 RIDAP52758 137 aaKnown RBP9.12□□□□□ -0.95
MSH5-213ENST00000468136 CLRN1P58418 232 aa9.12□□□□□ -0.95
MSH5-213ENST00000468136 DEFA1P59665 94 aa9.12□□□□□ -0.95
MSH5-213ENST00000468136 DEFA3P59666 94 aa9.12□□□□□ -0.95
MSH5-213ENST00000468136 ADAM8P78325 824 aa9.12□□□□□ -0.95
MSH5-213ENST00000468136 SLC3A1Q07837 685 aa9.12□□□□□ -0.95
MSH5-213ENST00000468136 KCNMB1Q16558 191 aa9.12□□□□□ -0.95
MSH5-213ENST00000468136 HYAL4Q2M3T9 481 aa9.12□□□□□ -0.95
MSH5-213ENST00000468136 TP53I3Q53FA7 332 aa9.12□□□□□ -0.95
MSH5-213ENST00000468136 ZMAT1Q5H9K5 638 aa9.12□□□□□ -0.95
MSH5-213ENST00000468136 LIPNQ5VXI9 398 aa9.12□□□□□ -0.95
MSH5-213ENST00000468136 SSX6Q7RTT6 188 aa9.12□□□□□ -0.95
MSH5-213ENST00000468136 DPY19L4Q7Z388 723 aa9.12□□□□□ -0.95
MSH5-213ENST00000468136 CEACAM19Q7Z692 300 aa9.12□□□□□ -0.95
MSH5-213ENST00000468136 YIPF7Q8N8F6 280 aa9.12□□□□□ -0.95
MSH5-213ENST00000468136 ZFP41Q8N8Y5 198 aa9.12□□□□□ -0.95
MSH5-213ENST00000468136 PRSS33Q8NF86 280 aa9.12□□□□□ -0.95
MSH5-213ENST00000468136 NOXO1Q8NFA2 376 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms