RNA–Protein interactions for RNA: ENST00000467318.5

DDX56-208, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,665 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-208ENST00000467318 GMPPAQ96IJ6 420 aaPredicted RBP13.14□□□□□ -0.31
DDX56-208ENST00000467318 BCO1Q9HAY6 547 aa13.14□□□□□ -0.31
DDX56-208ENST00000467318 NOX1Q9Y5S8 564 aa13.14□□□□□ -0.31
DDX56-208ENST00000467318 IGKV3D-15A0A087WSY6 115 aa13.13□□□□□ -0.31
DDX56-208ENST00000467318 FUOMA2VDF0 154 aa13.13□□□□□ -0.31
DDX56-208ENST00000467318 ZNF716A6NP11 495 aa13.13□□□□□ -0.31
DDX56-208ENST00000467318 RAMP1O60894 148 aa13.13□□□□□ -0.31
DDX56-208ENST00000467318 NDUFB2O95178 105 aa13.13□□□□□ -0.31
DDX56-208ENST00000467318 PLGP00747 810 aaPredicted RBP13.13□□□□□ -0.31
DDX56-208ENST00000467318 KLK2P20151 261 aa13.13□□□□□ -0.31
DDX56-208ENST00000467318 AQP2P41181 271 aa13.13□□□□□ -0.31
DDX56-208ENST00000467318 PPP5CP53041 499 aa13.13□□□□□ -0.31
DDX56-208ENST00000467318 PER3P56645 1201 aa13.13□□□□□ -0.31
DDX56-208ENST00000467318 LSM3P62310 102 aaKnown RBP13.13□□□□□ -0.31
DDX56-208ENST00000467318 ST3GAL4Q11206 333 aa13.13□□□□□ -0.31
DDX56-208ENST00000467318 ZNF404Q494X3 552 aa13.13□□□□□ -0.31
DDX56-208ENST00000467318 KLHL17Q6TDP4 642 aa13.13□□□□□ -0.31
DDX56-208ENST00000467318 C3P1Q6ZMU1 363 aa13.13□□□□□ -0.31
DDX56-208ENST00000467318 ZNF620Q6ZNG0 422 aa13.13□□□□□ -0.31
DDX56-208ENST00000467318 ITPKCQ96DU7 683 aa13.13□□□□□ -0.31
DDX56-208ENST00000467318 OR52D1Q9H346 318 aa13.13□□□□□ -0.31
DDX56-208ENST00000467318 MCCC2Q9HCC0 563 aa13.13□□□□□ -0.31
DDX56-208ENST00000467318 CCDC59Q9P031 241 aaKnown RBP13.13□□□□□ -0.31
DDX56-208ENST00000467318 EMC3Q9P0I2 261 aa13.13□□□□□ -0.31
DDX56-208ENST00000467318 B3GAT1Q9P2W7 334 aa13.13□□□□□ -0.31
DDX56-208ENST00000467318 DAPK2Q9UIK4 370 aa13.13□□□□□ -0.31
DDX56-208ENST00000467318 SH3BGRL2Q9UJC5 107 aa13.13□□□□□ -0.31
DDX56-208ENST00000467318 KIAA1549Q9HCM3 1950 aa13.13□□□□□ -0.31
DDX56-208ENST00000467318 A0A1B0GUH1 482 aa13.12□□□□□ -0.31
DDX56-208ENST00000467318 ISPDA4D126 451 aa13.12□□□□□ -0.31
DDX56-208ENST00000467318 ZNF724A8MTY0 619 aa13.12□□□□□ -0.31
DDX56-208ENST00000467318 PYCARD-AS1I3L0S3 204 aa13.12□□□□□ -0.31
DDX56-208ENST00000467318 CRHP06850 196 aa13.12□□□□□ -0.31
DDX56-208ENST00000467318 YES1P07947 543 aa13.12□□□□□ -0.31
DDX56-208ENST00000467318 NCS1P62166 190 aa13.12□□□□□ -0.31
DDX56-208ENST00000467318 OXA1LQ15070 435 aa13.12□□□□□ -0.31
DDX56-208ENST00000467318 SEM1Q6ZVN7 128 aa13.12□□□□□ -0.31
DDX56-208ENST00000467318 UEVLDQ8IX04 471 aa13.12□□□□□ -0.31
DDX56-208ENST00000467318 KDM8Q8N371 416 aa13.12□□□□□ -0.31
DDX56-208ENST00000467318 MFSD4AQ8N468 514 aa13.12□□□□□ -0.31
DDX56-208ENST00000467318 C9orf106Q8NAJ2 232 aa13.12□□□□□ -0.31
DDX56-208ENST00000467318 OR9K2Q8NGE7 335 aa13.12□□□□□ -0.31
DDX56-208ENST00000467318 FANK1Q8TC84 345 aa13.12□□□□□ -0.31
DDX56-208ENST00000467318 GPX7Q96SL4 187 aaPredicted RBP13.12□□□□□ -0.31
DDX56-208ENST00000467318 SLIRPQ9GZT3 109 aaKnown RBP13.12□□□□□ -0.31
DDX56-208ENST00000467318 INIPQ9NRY2 104 aa13.12□□□□□ -0.31
DDX56-208ENST00000467318 KLHL13Q9P2N7 655 aa13.12□□□□□ -0.31
DDX56-208ENST00000467318 MEMO1Q9Y316 297 aa13.12□□□□□ -0.31
DDX56-208ENST00000467318 CDH10Q9Y6N8 788 aa13.12□□□□□ -0.31
DDX56-208ENST00000467318 ZNF462Q96JM2 2506 aa13.12□□□□□ -0.31
DDX56-208ENST00000467318 ESPL1Q14674 2120 aa13.12□□□□□ -0.31
DDX56-208ENST00000467318 NPIPB13A6NJU9 1138 aa13.12□□□□□ -0.31
DDX56-208ENST00000467318 KDM4EB2RXH2 506 aaPredicted RBP13.12□□□□□ -0.31
DDX56-208ENST00000467318 NPIPB4C9JG80 1138 aa13.12□□□□□ -0.31
DDX56-208ENST00000467318 C11orf98E9PRG8 122 aa13.12□□□□□ -0.31
DDX56-208ENST00000467318 GLI4P10075 376 aa13.12□□□□□ -0.31
DDX56-208ENST00000467318 C21orf33P30042 268 aaPredicted RBP13.12□□□□□ -0.31
DDX56-208ENST00000467318 CEACAM8P31997 349 aaPredicted RBP13.12□□□□□ -0.31
DDX56-208ENST00000467318 RPL4P36578 427 aaKnown RBP13.12□□□□□ -0.31
DDX56-208ENST00000467318 LIPAP38571 399 aa13.12□□□□□ -0.31
DDX56-208ENST00000467318 FXYD6P3P58550 94 aa13.12□□□□□ -0.31
DDX56-208ENST00000467318 PMPCAQ10713 525 aa13.12□□□□□ -0.31
DDX56-208ENST00000467318 C1DQ13901 141 aaKnown RBP13.12□□□□□ -0.31
DDX56-208ENST00000467318 ARMCX4Q5H9R4 360 aa13.12□□□□□ -0.31
DDX56-208ENST00000467318 RIPPLY2Q5TAB7 128 aa13.12□□□□□ -0.31
DDX56-208ENST00000467318 EEF1A1P5Q5VTE0 462 aa13.12□□□□□ -0.31
DDX56-208ENST00000467318 SLX4IPQ5VYV7 408 aa13.12□□□□□ -0.31
DDX56-208ENST00000467318 RNLSQ5VYX0 342 aa13.12□□□□□ -0.31
DDX56-208ENST00000467318 DPY19L2P2Q6ZN68 376 aa13.12□□□□□ -0.31
DDX56-208ENST00000467318 CREB3L2Q70SY1 520 aa13.12□□□□□ -0.31
DDX56-208ENST00000467318 RPRMLQ8N4K4 120 aa13.12□□□□□ -0.31
DDX56-208ENST00000467318 OR52L1Q8NGH7 329 aa13.12□□□□□ -0.31
DDX56-208ENST00000467318 MOSPD2Q8NHP6 518 aa13.12□□□□□ -0.31
DDX56-208ENST00000467318 PRR7Q8TB68 274 aa13.12□□□□□ -0.31
DDX56-208ENST00000467318 DMRTA2Q96SC8 542 aa13.12□□□□□ -0.31
DDX56-208ENST00000467318 RHNO1Q9BSD3 238 aa13.12□□□□□ -0.31
DDX56-208ENST00000467318 NXF2Q9GZY0 626 aaKnown RBP13.12□□□□□ -0.31
DDX56-208ENST00000467318 REV1Q9UBZ9 1251 aa13.12□□□□□ -0.31
DDX56-208ENST00000467318 ING1Q9UK53 422 aaPredicted RBP13.12□□□□□ -0.31
DDX56-208ENST00000467318 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.12□□□□□ -0.31
DDX56-208ENST00000467318 PHF3Q92576 2039 aaKnown RBP13.11□□□□□ -0.31
DDX56-208ENST00000467318 A0A1W2PRG6 482 aa13.11□□□□□ -0.31
DDX56-208ENST00000467318 METTL15A6NJ78 407 aa13.11□□□□□ -0.31
DDX56-208ENST00000467318 H3BN98 237 aa13.11□□□□□ -0.31
DDX56-208ENST00000467318 CCL21O00585 134 aa13.11□□□□□ -0.31
DDX56-208ENST00000467318 SS18L1O75177 396 aaPredicted RBP13.11□□□□□ -0.31
DDX56-208ENST00000467318 TOXO94900 526 aa13.11□□□□□ -0.31
DDX56-208ENST00000467318 F13BP05160 661 aa13.11□□□□□ -0.31
DDX56-208ENST00000467318 CD14P08571 375 aa13.11□□□□□ -0.31
DDX56-208ENST00000467318 GNLYP22749 145 aa13.11□□□□□ -0.31
DDX56-208ENST00000467318 SLC6A6P31641 620 aa13.11□□□□□ -0.31
DDX56-208ENST00000467318 S100A5P33763 92 aa13.11□□□□□ -0.31
DDX56-208ENST00000467318 SOX6P35712 828 aa13.11□□□□□ -0.31
DDX56-208ENST00000467318 CTXN1P60606 82 aa13.11□□□□□ -0.31
DDX56-208ENST00000467318 ZNF45Q02386 682 aa13.11□□□□□ -0.31
DDX56-208ENST00000467318 POU3F1Q03052 451 aaPredicted RBP13.11□□□□□ -0.31
DDX56-208ENST00000467318 KRR1Q13601 381 aaKnown RBP13.11□□□□□ -0.31
DDX56-208ENST00000467318 TMEM201Q5SNT2 666 aa13.11□□□□□ -0.31
DDX56-208ENST00000467318 CASP12Q6UXS9 341 aa13.11□□□□□ -0.31
DDX56-208ENST00000467318 GDPGP1Q6ZNW5 385 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms