RNA–Protein interactions for RNA: ENST00000466897.1

NPHP4-205, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 1,192 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-205ENST00000466897 TOR3AQ9H497 397 aa13.4□□□□□ -0.26
NPHP4-205ENST00000466897 UPB1Q9UBR1 384 aa13.4□□□□□ -0.26
NPHP4-205ENST00000466897 SLC22A23A1A5C7 686 aa13.39□□□□□ -0.27
NPHP4-205ENST00000466897 SURF4O15260 269 aa13.39□□□□□ -0.27
NPHP4-205ENST00000466897 ARHGEF9O43307 516 aa13.39□□□□□ -0.27
NPHP4-205ENST00000466897 SNAP29O95721 258 aa13.39□□□□□ -0.27
NPHP4-205ENST00000466897 PSMB1P20618 241 aaKnown RBP13.39□□□□□ -0.27
NPHP4-205ENST00000466897 EPHA2P29317 976 aa13.39□□□□□ -0.27
NPHP4-205ENST00000466897 MPGP29372 298 aa13.39□□□□□ -0.27
NPHP4-205ENST00000466897 CDKN2AP42771 156 aaKnown RBP13.39□□□□□ -0.27
NPHP4-205ENST00000466897 PTDSS1P48651 473 aaKnown RBP13.39□□□□□ -0.27
NPHP4-205ENST00000466897 SH3BGRP55822 239 aaPredicted RBP13.39□□□□□ -0.27
NPHP4-205ENST00000466897 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.39□□□□□ -0.27
NPHP4-205ENST00000466897 C1QTNF12Q5T7M4 302 aa13.39□□□□□ -0.27
NPHP4-205ENST00000466897 ACSM5Q6NUN0 579 aa13.39□□□□□ -0.27
NPHP4-205ENST00000466897 PTCHD4Q6ZW05 846 aa13.39□□□□□ -0.27
NPHP4-205ENST00000466897 ZNF627Q7L945 461 aa13.39□□□□□ -0.27
NPHP4-205ENST00000466897 JAZF1Q86VZ6 243 aa13.39□□□□□ -0.27
NPHP4-205ENST00000466897 UBE2J2Q8N2K1 259 aa13.39□□□□□ -0.27
NPHP4-205ENST00000466897 IQCF1Q8N6M8 205 aa13.39□□□□□ -0.27
NPHP4-205ENST00000466897 NPEPL1Q8NDH3 523 aa13.39□□□□□ -0.27
NPHP4-205ENST00000466897 C1orf162Q8NEQ5 155 aaPredicted RBP13.39□□□□□ -0.27
NPHP4-205ENST00000466897 SSC4DQ8WTU2 575 aa13.39□□□□□ -0.27
NPHP4-205ENST00000466897 ALKBH3Q96Q83 286 aaPredicted RBP13.39□□□□□ -0.27
NPHP4-205ENST00000466897 SLC38A2Q96QD8 506 aa13.39□□□□□ -0.27
NPHP4-205ENST00000466897 RBP7Q96R05 134 aa13.39□□□□□ -0.27
NPHP4-205ENST00000466897 DDOQ99489 341 aa13.39□□□□□ -0.27
NPHP4-205ENST00000466897 PITX2Q99697 317 aa13.39□□□□□ -0.27
NPHP4-205ENST00000466897 USB1Q9BQ65 265 aaKnown RBP13.39□□□□□ -0.27
NPHP4-205ENST00000466897 ULBP2Q9BZM5 246 aa13.39□□□□□ -0.27
NPHP4-205ENST00000466897 OR10A4Q9H209 315 aa13.39□□□□□ -0.27
NPHP4-205ENST00000466897 RIBC2Q9H4K1 309 aa13.39□□□□□ -0.27
NPHP4-205ENST00000466897 GPR35Q9HC97 309 aa13.39□□□□□ -0.27
NPHP4-205ENST00000466897 KCNJ16Q9NPI9 418 aa13.39□□□□□ -0.27
NPHP4-205ENST00000466897 TAS2R16Q9NYV7 291 aa13.39□□□□□ -0.27
NPHP4-205ENST00000466897 FLNCQ14315 2725 aa13.39□□□□□ -0.27
NPHP4-205ENST00000466897 RIIAD1A6NNX1 92 aa13.38□□□□□ -0.27
NPHP4-205ENST00000466897 SLC16A6O15403 523 aa13.38□□□□□ -0.27
NPHP4-205ENST00000466897 KRT33AO76009 404 aa13.38□□□□□ -0.27
NPHP4-205ENST00000466897 RENP00797 406 aa13.38□□□□□ -0.27
NPHP4-205ENST00000466897 ZNF3P17036 446 aa13.38□□□□□ -0.27
NPHP4-205ENST00000466897 IGHV1-2P23083 117 aa13.38□□□□□ -0.27
NPHP4-205ENST00000466897 POLR2IP36954 125 aaKnown RBP13.38□□□□□ -0.27
NPHP4-205ENST00000466897 CD79BP40259 229 aa13.38□□□□□ -0.27
NPHP4-205ENST00000466897 EFNB1P98172 346 aa13.38□□□□□ -0.27
NPHP4-205ENST00000466897 ROR2Q01974 943 aaKnown RBP13.38□□□□□ -0.27
NPHP4-205ENST00000466897 TGFBR3Q03167 851 aa13.38□□□□□ -0.27
NPHP4-205ENST00000466897 TFF3Q07654 80 aa13.38□□□□□ -0.27
NPHP4-205ENST00000466897 CD47Q08722 323 aa13.38□□□□□ -0.27
NPHP4-205ENST00000466897 FAPQ12884 760 aa13.38□□□□□ -0.27
NPHP4-205ENST00000466897 CDSNQ15517 529 aa13.38□□□□□ -0.27
NPHP4-205ENST00000466897 NRN1LQ496H8 165 aa13.38□□□□□ -0.27
NPHP4-205ENST00000466897 PHYHD1Q5SRE7 291 aa13.38□□□□□ -0.27
NPHP4-205ENST00000466897 CARD17Q5XLA6 110 aa13.38□□□□□ -0.27
NPHP4-205ENST00000466897 LRFN4Q6PJG9 635 aa13.38□□□□□ -0.27
NPHP4-205ENST00000466897 LINGO2Q7L985 606 aa13.38□□□□□ -0.27
NPHP4-205ENST00000466897 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.38□□□□□ -0.27
NPHP4-205ENST00000466897 LUZP2Q86TE4 346 aa13.38□□□□□ -0.27
NPHP4-205ENST00000466897 GALNT4Q8N4A0 578 aa13.38□□□□□ -0.27
NPHP4-205ENST00000466897 OR52E2Q8NGJ4 325 aa13.38□□□□□ -0.27
NPHP4-205ENST00000466897 OR4K13Q8NH42 304 aa13.38□□□□□ -0.27
NPHP4-205ENST00000466897 RNASE6Q93091 150 aaKnown RBP13.38□□□□□ -0.27
NPHP4-205ENST00000466897 MCHR2Q969V1 340 aa13.38□□□□□ -0.27
NPHP4-205ENST00000466897 RBM24Q9BX46 236 aaKnown RBP13.38□□□□□ -0.27
NPHP4-205ENST00000466897 HDHD5Q9BXW7 423 aa13.38□□□□□ -0.27
NPHP4-205ENST00000466897 FN3KQ9H479 309 aa13.38□□□□□ -0.27
NPHP4-205ENST00000466897 CRLF2Q9HC73 371 aa13.38□□□□□ -0.27
NPHP4-205ENST00000466897 GALNT8Q9NY28 637 aa13.38□□□□□ -0.27
NPHP4-205ENST00000466897 NDRG4Q9ULP0 352 aaKnown RBP13.38□□□□□ -0.27
NPHP4-205ENST00000466897 FAM90A27PA6NNH2 459 aa13.37□□□□□ -0.27
NPHP4-205ENST00000466897 ZNF99A8MXY4 864 aaPredicted RBP13.37□□□□□ -0.27
NPHP4-205ENST00000466897 M0R3G1 203 aa13.37□□□□□ -0.27
NPHP4-205ENST00000466897 DHHO43323 396 aa13.37□□□□□ -0.27
NPHP4-205ENST00000466897 IGHV3-9P01782 118 aa13.37□□□□□ -0.27
NPHP4-205ENST00000466897 ITGA5P08648 1049 aa13.37□□□□□ -0.27
NPHP4-205ENST00000466897 QDPRP09417 244 aa13.37□□□□□ -0.27
NPHP4-205ENST00000466897 CRABP1P29762 137 aa13.37□□□□□ -0.27
NPHP4-205ENST00000466897 SLC25A1P53007 311 aa13.37□□□□□ -0.27
NPHP4-205ENST00000466897 SORDQ00796 357 aa13.37□□□□□ -0.27
NPHP4-205ENST00000466897 LGALS3BPQ08380 585 aa13.37□□□□□ -0.27
NPHP4-205ENST00000466897 KEAP1Q14145 624 aa13.37□□□□□ -0.27
NPHP4-205ENST00000466897 SLC35F1Q5T1Q4 408 aa13.37□□□□□ -0.27
NPHP4-205ENST00000466897 SFRP5Q5T4F7 317 aa13.37□□□□□ -0.27
NPHP4-205ENST00000466897 TMEM236Q5W0B7 351 aa13.37□□□□□ -0.27
NPHP4-205ENST00000466897 LEG1Q6P5S2 330 aa13.37□□□□□ -0.27
NPHP4-205ENST00000466897 DNM1P34Q6PK57 102 aa13.37□□□□□ -0.27
NPHP4-205ENST00000466897 SLC25A47Q6Q0C1 308 aa13.37□□□□□ -0.27
NPHP4-205ENST00000466897 FOXL2NBQ6ZUU3 175 aa13.37□□□□□ -0.27
NPHP4-205ENST00000466897 ZBTB46Q86UZ6 589 aa13.37□□□□□ -0.27
NPHP4-205ENST00000466897 SYT14Q8NB59 555 aa13.37□□□□□ -0.27
NPHP4-205ENST00000466897 SLC37A3Q8NCC5 494 aa13.37□□□□□ -0.27
NPHP4-205ENST00000466897 SDR9C7Q8NEX9 313 aa13.37□□□□□ -0.27
NPHP4-205ENST00000466897 NMNAT3Q96T66 252 aa13.37□□□□□ -0.27
NPHP4-205ENST00000466897 NMNAT2Q9BZQ4 307 aa13.37□□□□□ -0.27
NPHP4-205ENST00000466897 SYT4Q9H2B2 425 aa13.37□□□□□ -0.27
NPHP4-205ENST00000466897 FAM118AQ9NWS6 357 aa13.37□□□□□ -0.27
NPHP4-205ENST00000466897 GPR52Q9Y2T5 361 aa13.37□□□□□ -0.27
NPHP4-205ENST00000466897 KLF2Q9Y5W3 355 aaPredicted RBP13.37□□□□□ -0.27
NPHP4-205ENST00000466897 FKBP7Q9Y680 259 aa13.37□□□□□ -0.27
NPHP4-205ENST00000466897 DOPEY1Q5JWR5 2465 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms