RNA–Protein interactions for RNA: ENST00000466159.6

SYNE1-217, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 1 (best) BASIC

Gene SYNE1, Length 2,610 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-217ENST00000466159 CDK2P24941 298 aa8.07□□□□□ -1.12
SYNE1-217ENST00000466159 MAPK3P27361 379 aaPredicted RBP8.07□□□□□ -1.12
SYNE1-217ENST00000466159 LCN1P31025 176 aa8.07□□□□□ -1.12
SYNE1-217ENST00000466159 KIR3DL2P43630 455 aa8.07□□□□□ -1.12
SYNE1-217ENST00000466159 P2RX1P51575 399 aa8.07□□□□□ -1.12
SYNE1-217ENST00000466159 CCR9P51686 369 aa8.07□□□□□ -1.12
SYNE1-217ENST00000466159 RPL27P61353 136 aaKnown RBP8.07□□□□□ -1.12
SYNE1-217ENST00000466159 INSM1Q01101 510 aaPredicted RBP8.07□□□□□ -1.12
SYNE1-217ENST00000466159 EGR3Q06889 387 aa8.07□□□□□ -1.12
SYNE1-217ENST00000466159 SGCBQ16585 318 aa8.07□□□□□ -1.12
SYNE1-217ENST00000466159 MEP1BQ16820 701 aa8.07□□□□□ -1.12
SYNE1-217ENST00000466159 TMEM69Q5SWH9 247 aa8.07□□□□□ -1.12
SYNE1-217ENST00000466159 FAM69AQ5T7M9 428 aa8.07□□□□□ -1.12
SYNE1-217ENST00000466159 DND1Q8IYX4 353 aaKnown RBP8.07□□□□□ -1.12
SYNE1-217ENST00000466159 KDM8Q8N371 416 aa8.07□□□□□ -1.12
SYNE1-217ENST00000466159 ZNF441Q8N8Z8 693 aa8.07□□□□□ -1.12
SYNE1-217ENST00000466159 GPR119Q8TDV5 335 aa8.07□□□□□ -1.12
SYNE1-217ENST00000466159 THAP3Q8WTV1 239 aaPredicted RBP8.07□□□□□ -1.12
SYNE1-217ENST00000466159 PPP1R14AQ96A00 147 aa8.07□□□□□ -1.12
SYNE1-217ENST00000466159 HYLS1Q96M11 299 aa8.07□□□□□ -1.12
SYNE1-217ENST00000466159 OR2M2Q96R28 347 aa8.07□□□□□ -1.12
SYNE1-217ENST00000466159 NPAS1Q99742 590 aa8.07□□□□□ -1.12
SYNE1-217ENST00000466159 C7orf50Q9BRJ6 194 aaKnown RBP8.07□□□□□ -1.12
SYNE1-217ENST00000466159 TRAF4Q9BUZ4 470 aaPredicted RBP8.07□□□□□ -1.12
SYNE1-217ENST00000466159 PCED1AQ9H1Q7 454 aa8.07□□□□□ -1.12
SYNE1-217ENST00000466159 ELOVL3Q9HB03 270 aa8.07□□□□□ -1.12
SYNE1-217ENST00000466159 HRASLSQ9HDD0 168 aa8.07□□□□□ -1.12
SYNE1-217ENST00000466159 SLC22A11Q9NSA0 550 aa8.07□□□□□ -1.12
SYNE1-217ENST00000466159 BCAT2O15382 392 aaPredicted RBP8.07□□□□□ -1.12
SYNE1-217ENST00000466159 ZNF354AO60765 605 aaPredicted RBP8.07□□□□□ -1.12
SYNE1-217ENST00000466159 NPIPB7O75200 414 aa8.07□□□□□ -1.12
SYNE1-217ENST00000466159 ZNF254O75437 659 aa8.07□□□□□ -1.12
SYNE1-217ENST00000466159 CALCBP10092 127 aa8.07□□□□□ -1.12
SYNE1-217ENST00000466159 POLR2HP52434 150 aaKnown RBP8.07□□□□□ -1.12
SYNE1-217ENST00000466159 ART1P52961 327 aa8.07□□□□□ -1.12
SYNE1-217ENST00000466159 MELKQ14680 651 aa8.07□□□□□ -1.12
SYNE1-217ENST00000466159 WDR38Q5JTN6 314 aa8.07□□□□□ -1.12
SYNE1-217ENST00000466159 C1orf140Q5VVS0 124 aa8.07□□□□□ -1.12
SYNE1-217ENST00000466159 CD276Q5ZPR3 534 aa8.07□□□□□ -1.12
SYNE1-217ENST00000466159 FAAP20Q6NZ36 180 aa8.07□□□□□ -1.12
SYNE1-217ENST00000466159 TMPRSS9Q7Z410 1059 aa8.07□□□□□ -1.12
SYNE1-217ENST00000466159 C9orf62Q8N4C0 152 aa8.07□□□□□ -1.12
SYNE1-217ENST00000466159 OR11G2Q8NGC1 345 aa8.07□□□□□ -1.12
SYNE1-217ENST00000466159 GRPEL2Q8TAA5 225 aa8.07□□□□□ -1.12
SYNE1-217ENST00000466159 ZNF519Q8TB69 540 aa8.07□□□□□ -1.12
SYNE1-217ENST00000466159 PIGKQ92643 395 aa8.07□□□□□ -1.12
SYNE1-217ENST00000466159 SNAPC3Q92966 411 aa8.07□□□□□ -1.12
SYNE1-217ENST00000466159 HAVCR1Q96D42 359 aa8.07□□□□□ -1.12
SYNE1-217ENST00000466159 COMMD4Q9H0A8 199 aa8.07□□□□□ -1.12
SYNE1-217ENST00000466159 C20orf85Q9H1P6 137 aa8.07□□□□□ -1.12
SYNE1-217ENST00000466159 PLEKHA1Q9HB21 404 aa8.07□□□□□ -1.12
SYNE1-217ENST00000466159 ZFP64Q9NPA5 681 aa8.07□□□□□ -1.12
SYNE1-217ENST00000466159 MRPL22Q9NWU5 206 aaKnown RBP8.07□□□□□ -1.12
SYNE1-217ENST00000466159 KLHL9Q9P2J3 617 aa8.07□□□□□ -1.12
SYNE1-217ENST00000466159 MRPS17Q9Y2R5 130 aaKnown RBP8.07□□□□□ -1.12
SYNE1-217ENST00000466159 FKBP7Q9Y680 259 aa8.07□□□□□ -1.12
SYNE1-217ENST00000466159 TMEM14AQ9Y6G1 99 aa8.07□□□□□ -1.12
SYNE1-217ENST00000466159 VPS13AQ96RL7 3174 aa8.06□□□□□ -1.12
SYNE1-217ENST00000466159 TRBV5-7A0A0A0MS05 114 aa8.06□□□□□ -1.12
SYNE1-217ENST00000466159 TMEM212A6NML5 194 aa8.06□□□□□ -1.12
SYNE1-217ENST00000466159 ANXA2P2A6NMY6 339 aa8.06□□□□□ -1.12
SYNE1-217ENST00000466159 A8MVM7 634 aa8.06□□□□□ -1.12
SYNE1-217ENST00000466159 ADAM10O14672 748 aa8.06□□□□□ -1.12
SYNE1-217ENST00000466159 KHDRBS3O75525 346 aaKnown RBP8.06□□□□□ -1.12
SYNE1-217ENST00000466159 KRT33AO76009 404 aa8.06□□□□□ -1.12
SYNE1-217ENST00000466159 MT-ATP6P00846 226 aa8.06□□□□□ -1.12
SYNE1-217ENST00000466159 HPXP02790 462 aa8.06□□□□□ -1.12
SYNE1-217ENST00000466159 ANXA2P07355 339 aaKnown RBP8.06□□□□□ -1.12
SYNE1-217ENST00000466159 SPARCP09486 303 aa8.06□□□□□ -1.12
SYNE1-217ENST00000466159 HLA-DOBP13765 273 aa8.06□□□□□ -1.12
SYNE1-217ENST00000466159 CTLA4P16410 223 aa8.06□□□□□ -1.12
SYNE1-217ENST00000466159 POU3F3P20264 500 aaPredicted RBP8.06□□□□□ -1.12
SYNE1-217ENST00000466159 IL11P20809 199 aa8.06□□□□□ -1.12
SYNE1-217ENST00000466159 HTR2BP41595 481 aa8.06□□□□□ -1.12
SYNE1-217ENST00000466159 COL28A1Q2UY09 1125 aa8.06□□□□□ -1.12
SYNE1-217ENST00000466159 COX15Q7KZN9 410 aa8.06□□□□□ -1.12
SYNE1-217ENST00000466159 CARFQ8N187 725 aa8.06□□□□□ -1.12
SYNE1-217ENST00000466159 SLC38A9Q8NBW4 561 aa8.06□□□□□ -1.12
SYNE1-217ENST00000466159 OR11H4Q8NGC9 324 aa8.06□□□□□ -1.12
SYNE1-217ENST00000466159 OR56B4Q8NH76 319 aa8.06□□□□□ -1.12
SYNE1-217ENST00000466159 ZNF417Q8TAU3 575 aa8.06□□□□□ -1.12
SYNE1-217ENST00000466159 GPR148Q8TDV2 347 aa8.06□□□□□ -1.12
SYNE1-217ENST00000466159 FCAMRQ8WWV6 532 aa8.06□□□□□ -1.12
SYNE1-217ENST00000466159 MIB2Q96AX9 1013 aa8.06□□□□□ -1.12
SYNE1-217ENST00000466159 C4orf45Q96LM5 186 aa8.06□□□□□ -1.12
SYNE1-217ENST00000466159 DCBLD2Q96PD2 775 aa8.06□□□□□ -1.12
SYNE1-217ENST00000466159 ZNF587Q96SQ5 575 aaPredicted RBP8.06□□□□□ -1.12
SYNE1-217ENST00000466159 MNTQ99583 582 aa8.06□□□□□ -1.12
SYNE1-217ENST00000466159 TAS2R10Q9NYW0 307 aa8.06□□□□□ -1.12
SYNE1-217ENST00000466159 STMN3Q9NZ72 180 aa8.06□□□□□ -1.12
SYNE1-217ENST00000466159 SEMA5BQ9P283 1151 aa8.06□□□□□ -1.12
SYNE1-217ENST00000466159 ATXN7L1Q9ULK2 861 aaPredicted RBP8.06□□□□□ -1.12
SYNE1-217ENST00000466159 SLC22A13Q9Y226 551 aa8.06□□□□□ -1.12
SYNE1-217ENST00000466159 CPAMD8Q8IZJ3 1885 aa8.06□□□□□ -1.12
SYNE1-217ENST00000466159 A0A1B0GTQ1 180 aa8.06□□□□□ -1.12
SYNE1-217ENST00000466159 PLPP3O14495 311 aa8.06□□□□□ -1.12
SYNE1-217ENST00000466159 GPR171O14626 319 aa8.06□□□□□ -1.12
SYNE1-217ENST00000466159 TSC22D2O75157 780 aa8.06□□□□□ -1.12
SYNE1-217ENST00000466159 DXOO77932 396 aaKnown RBP8.06□□□□□ -1.12
SYNE1-217ENST00000466159 OR6A2O95222 327 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms