RNA–Protein interactions for RNA: ENST00000466100.1

VCP-204, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 508 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-204ENST00000466100 LIX1LQ8IVB5 337 aa9.84□□□□□ -0.83
VCP-204ENST00000466100 ENTHD1Q8IYW4 607 aa9.84□□□□□ -0.83
VCP-204ENST00000466100 CYB561A3Q8NBI2 242 aa9.84□□□□□ -0.83
VCP-204ENST00000466100 RELL2Q8NC24 303 aaPredicted RBP9.84□□□□□ -0.83
VCP-204ENST00000466100 PRR7Q8TB68 274 aa9.84□□□□□ -0.83
VCP-204ENST00000466100 FAM81AQ8TBF8 368 aa9.84□□□□□ -0.83
VCP-204ENST00000466100 TMEM163Q8TC26 289 aa9.84□□□□□ -0.83
VCP-204ENST00000466100 RND1Q92730 232 aa9.84□□□□□ -0.83
VCP-204ENST00000466100 UBE2FQ969M7 185 aa9.84□□□□□ -0.83
VCP-204ENST00000466100 APH1AQ96BI3 265 aa9.84□□□□□ -0.83
VCP-204ENST00000466100 SLC38A2Q96QD8 506 aa9.84□□□□□ -0.83
VCP-204ENST00000466100 HCAR1Q9BXC0 346 aa9.84□□□□□ -0.83
VCP-204ENST00000466100 PRRG3Q9BZD7 231 aa9.84□□□□□ -0.83
VCP-204ENST00000466100 SYT4Q9H2B2 425 aa9.84□□□□□ -0.83
VCP-204ENST00000466100 FN3KQ9H479 309 aa9.84□□□□□ -0.83
VCP-204ENST00000466100 C12orf49Q9H741 205 aa9.84□□□□□ -0.83
VCP-204ENST00000466100 HINT3Q9NQE9 182 aaKnown RBP9.84□□□□□ -0.83
VCP-204ENST00000466100 PLSCR4Q9NRQ2 329 aa9.84□□□□□ -0.83
VCP-204ENST00000466100 SLC7A10Q9NS82 523 aa9.84□□□□□ -0.83
VCP-204ENST00000466100 ZNF226Q9NYT6 803 aa9.84□□□□□ -0.83
VCP-204ENST00000466100 TVP23BQ9NYZ1 205 aa9.84□□□□□ -0.83
VCP-204ENST00000466100 GLTPQ9NZD2 209 aa9.84□□□□□ -0.83
VCP-204ENST00000466100 JKAMPQ9P055 326 aa9.84□□□□□ -0.83
VCP-204ENST00000466100 ZNF629Q9UEG4 869 aaPredicted RBP9.84□□□□□ -0.83
VCP-204ENST00000466100 PRSS50Q9UI38 385 aa9.84□□□□□ -0.83
VCP-204ENST00000466100 RNF6Q9Y252 685 aa9.84□□□□□ -0.83
VCP-204ENST00000466100 GPR52Q9Y2T5 361 aa9.84□□□□□ -0.83
VCP-204ENST00000466100 DCHS2Q6V1P9 2916 aa9.83□□□□□ -0.84
VCP-204ENST00000466100 IGLV1-36A0A0B4J1U3 117 aa9.83□□□□□ -0.84
VCP-204ENST00000466100 OR6C65A6NJZ3 312 aa9.83□□□□□ -0.84
VCP-204ENST00000466100 ZNF726A6NNF4 738 aa9.83□□□□□ -0.84
VCP-204ENST00000466100 DCTN6O00399 190 aa9.83□□□□□ -0.84
VCP-204ENST00000466100 LRRTM2O43300 516 aa9.83□□□□□ -0.84
VCP-204ENST00000466100 CNOT4O95628 575 aaKnown RBP9.83□□□□□ -0.84
VCP-204ENST00000466100 IFNGP01579 166 aa9.83□□□□□ -0.84
VCP-204ENST00000466100 CTLA4P16410 223 aa9.83□□□□□ -0.84
VCP-204ENST00000466100 ZNF3P17036 446 aa9.83□□□□□ -0.84
VCP-204ENST00000466100 SLC2A5P22732 501 aa9.83□□□□□ -0.84
VCP-204ENST00000466100 OPRM1P35372 400 aa9.83□□□□□ -0.84
VCP-204ENST00000466100 SLC25A1P53007 311 aa9.83□□□□□ -0.84
VCP-204ENST00000466100 CLRN1P58418 232 aa9.83□□□□□ -0.84
VCP-204ENST00000466100 CDC42P60953 191 aa9.83□□□□□ -0.84
VCP-204ENST00000466100 SNRPGP62308 76 aaKnown RBP9.83□□□□□ -0.84
VCP-204ENST00000466100 IL18R1Q13478 541 aa9.83□□□□□ -0.84
VCP-204ENST00000466100 SLC25A30Q5SVS4 291 aa9.83□□□□□ -0.84
VCP-204ENST00000466100 C10orf128Q5T292 105 aa9.83□□□□□ -0.84
VCP-204ENST00000466100 AADACL4Q5VUY2 407 aa9.83□□□□□ -0.84
VCP-204ENST00000466100 LRFN4Q6PJG9 635 aa9.83□□□□□ -0.84
VCP-204ENST00000466100 SLC25A47Q6Q0C1 308 aa9.83□□□□□ -0.84
VCP-204ENST00000466100 ZBTB46Q86UZ6 589 aa9.83□□□□□ -0.84
VCP-204ENST00000466100 JAZF1Q86VZ6 243 aa9.83□□□□□ -0.84
VCP-204ENST00000466100 FAM26EQ8N5C1 309 aa9.83□□□□□ -0.84
VCP-204ENST00000466100 TCEANCQ8N8B7 351 aa9.83□□□□□ -0.84
VCP-204ENST00000466100 POMGNT2Q8NAT1 580 aa9.83□□□□□ -0.84
VCP-204ENST00000466100 SYT14Q8NB59 555 aa9.83□□□□□ -0.84
VCP-204ENST00000466100 ZNF555Q8NEP9 628 aa9.83□□□□□ -0.84
VCP-204ENST00000466100 OR8J1Q8NGP2 316 aa9.83□□□□□ -0.84
VCP-204ENST00000466100 FBLIM1Q8WUP2 373 aa9.83□□□□□ -0.84
VCP-204ENST00000466100 APH1BQ8WW43 257 aa9.83□□□□□ -0.84
VCP-204ENST00000466100 TRUB1Q8WWH5 349 aaKnown RBP9.83□□□□□ -0.84
VCP-204ENST00000466100 PTP4A1Q93096 173 aa9.83□□□□□ -0.84
VCP-204ENST00000466100 MCHR2Q969V1 340 aa9.83□□□□□ -0.84
VCP-204ENST00000466100 MUS81Q96NY9 551 aa9.83□□□□□ -0.84
VCP-204ENST00000466100 ALKBH3Q96Q83 286 aaPredicted RBP9.83□□□□□ -0.84
VCP-204ENST00000466100 ANKRD60Q9BZ19 345 aa9.83□□□□□ -0.84
VCP-204ENST00000466100 MED20Q9H944 212 aa9.83□□□□□ -0.84
VCP-204ENST00000466100 RAB26Q9ULW5 256 aa9.83□□□□□ -0.84
VCP-204ENST00000466100 USP9YO00507 2555 aaPredicted RBP9.82□□□□□ -0.84
VCP-204ENST00000466100 HRNRQ86YZ3 2850 aaPredicted RBP9.82□□□□□ -0.84
VCP-204ENST00000466100 FAM183AA6NL82 134 aa9.82□□□□□ -0.84
VCP-204ENST00000466100 RPL36A-HNRNPH2H7BZ11 118 aa9.82□□□□□ -0.84
VCP-204ENST00000466100 MSTNO14793 375 aa9.82□□□□□ -0.84
VCP-204ENST00000466100 WBP4O75554 376 aaKnown RBP9.82□□□□□ -0.84
VCP-204ENST00000466100 RENP00797 406 aa9.82□□□□□ -0.84
VCP-204ENST00000466100 IGHV3-9P01782 118 aa9.82□□□□□ -0.84
VCP-204ENST00000466100 SPI1P17947 270 aa9.82□□□□□ -0.84
VCP-204ENST00000466100 COX5AP20674 150 aa9.82□□□□□ -0.84
VCP-204ENST00000466100 MYF6P23409 242 aa9.82□□□□□ -0.84
VCP-204ENST00000466100 FOXG1P55316 489 aaPredicted RBP9.82□□□□□ -0.84
VCP-204ENST00000466100 ISL1P61371 349 aa9.82□□□□□ -0.84
VCP-204ENST00000466100 CD47Q08722 323 aa9.82□□□□□ -0.84
VCP-204ENST00000466100 MAD2L1BPQ15013 274 aaPredicted RBP9.82□□□□□ -0.84
VCP-204ENST00000466100 STK11Q15831 433 aa9.82□□□□□ -0.84
VCP-204ENST00000466100 THEM4Q5T1C6 240 aa9.82□□□□□ -0.84
VCP-204ENST00000466100 FBXW9Q5XUX1 488 aa9.82□□□□□ -0.84
VCP-204ENST00000466100 ZNF474Q6S9Z5 364 aaPredicted RBP9.82□□□□□ -0.84
VCP-204ENST00000466100 Q6ZT83 130 aa9.82□□□□□ -0.84
VCP-204ENST00000466100 FOXL2NBQ6ZUU3 175 aa9.82□□□□□ -0.84
VCP-204ENST00000466100 CPOQ8IVL8 374 aa9.82□□□□□ -0.84
VCP-204ENST00000466100 ZNF100Q8IYN0 542 aa9.82□□□□□ -0.84
VCP-204ENST00000466100 OR6V1Q8N148 313 aa9.82□□□□□ -0.84
VCP-204ENST00000466100 GABRG1Q8N1C3 465 aa9.82□□□□□ -0.84
VCP-204ENST00000466100 DEPDC4Q8N2C3 294 aa9.82□□□□□ -0.84
VCP-204ENST00000466100 BBS1Q8NFJ9 593 aa9.82□□□□□ -0.84
VCP-204ENST00000466100 OR9Q1Q8NGQ5 310 aa9.82□□□□□ -0.84
VCP-204ENST00000466100 OR6N1Q8NGY5 312 aa9.82□□□□□ -0.84
VCP-204ENST00000466100 RHOXF1Q8NHV9 184 aa9.82□□□□□ -0.84
VCP-204ENST00000466100 FNDC8Q8TC99 324 aa9.82□□□□□ -0.84
VCP-204ENST00000466100 ZNRF4Q8WWF5 429 aa9.82□□□□□ -0.84
VCP-204ENST00000466100 ZNF837Q96EG3 531 aaPredicted RBP9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms