RNA–Protein interactions for RNA: ENST00000466017.1

VPS41-211, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-211ENST00000466017 CTU2Q2VPK5 515 aaKnown RBP4.89□□□□□ -1.63
VPS41-211ENST00000466017 TMEM176BQ3YBM2 270 aaPredicted RBP4.89□□□□□ -1.63
VPS41-211ENST00000466017 ALG10Q5BKT4 473 aa4.89□□□□□ -1.63
VPS41-211ENST00000466017 SLC35D3Q5M8T2 416 aa4.89□□□□□ -1.63
VPS41-211ENST00000466017 PDSS1Q5T2R2 415 aa4.89□□□□□ -1.63
VPS41-211ENST00000466017 C1QL3Q5VWW1 255 aa4.89□□□□□ -1.63
VPS41-211ENST00000466017 TMEM236Q5W0B7 351 aa4.89□□□□□ -1.63
VPS41-211ENST00000466017 FAM205BPQ63HN1 556 aa4.89□□□□□ -1.63
VPS41-211ENST00000466017 ARHGAP11AQ6P4F7 1023 aa4.89□□□□□ -1.63
VPS41-211ENST00000466017 Q6ZPB1 254 aaPredicted RBP4.89□□□□□ -1.63
VPS41-211ENST00000466017 CXorf67Q86X51 503 aaPredicted RBP4.89□□□□□ -1.63
VPS41-211ENST00000466017 GID4Q8IVV7 300 aa4.89□□□□□ -1.63
VPS41-211ENST00000466017 LRRC17Q8N6Y2 441 aa4.89□□□□□ -1.63
VPS41-211ENST00000466017 ARIH2OSQ8N7S6 290 aa4.89□□□□□ -1.63
VPS41-211ENST00000466017 TCEANCQ8N8B7 351 aa4.89□□□□□ -1.63
VPS41-211ENST00000466017 ZNF610Q8N9Z0 462 aa4.89□□□□□ -1.63
VPS41-211ENST00000466017 CLRN3Q8NCR9 226 aa4.89□□□□□ -1.63
VPS41-211ENST00000466017 OR13C2Q8NGS9 318 aa4.89□□□□□ -1.63
VPS41-211ENST00000466017 OR51A7Q8NH64 312 aa4.89□□□□□ -1.63
VPS41-211ENST00000466017 FAM81AQ8TBF8 368 aa4.89□□□□□ -1.63
VPS41-211ENST00000466017 APH1BQ8WW43 257 aa4.89□□□□□ -1.63
VPS41-211ENST00000466017 PTP4A1Q93096 173 aa4.89□□□□□ -1.63
VPS41-211ENST00000466017 RFKQ969G6 155 aa4.89□□□□□ -1.63
VPS41-211ENST00000466017 ARL5BQ96KC2 179 aa4.89□□□□□ -1.63
VPS41-211ENST00000466017 KLHL15Q96M94 604 aa4.89□□□□□ -1.63
VPS41-211ENST00000466017 OXGR1Q96P68 337 aa4.89□□□□□ -1.63
VPS41-211ENST00000466017 MOGAT1Q96PD6 335 aa4.89□□□□□ -1.63
VPS41-211ENST00000466017 ENKD1Q9H0I2 346 aa4.89□□□□□ -1.63
VPS41-211ENST00000466017 SLC6A15Q9H2J7 730 aa4.89□□□□□ -1.63
VPS41-211ENST00000466017 CHST11Q9NPF2 352 aa4.89□□□□□ -1.63
VPS41-211ENST00000466017 BATF3Q9NR55 127 aa4.89□□□□□ -1.63
VPS41-211ENST00000466017 INIPQ9NRY2 104 aa4.89□□□□□ -1.63
VPS41-211ENST00000466017 TBC1D23Q9NUY8 699 aa4.89□□□□□ -1.63
VPS41-211ENST00000466017 IMPAD1Q9NX62 359 aa4.89□□□□□ -1.63
VPS41-211ENST00000466017 TVP23BQ9NYZ1 205 aa4.89□□□□□ -1.63
VPS41-211ENST00000466017 PSORS1C1Q9UIG5 152 aa4.89□□□□□ -1.63
VPS41-211ENST00000466017 DKKL1Q9UK85 242 aa4.89□□□□□ -1.63
VPS41-211ENST00000466017 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP4.89□□□□□ -1.63
VPS41-211ENST00000466017 MOKQ9UQ07 419 aa4.89□□□□□ -1.63
VPS41-211ENST00000466017 RASD1Q9Y272 281 aa4.89□□□□□ -1.63
VPS41-211ENST00000466017 EXOGQ9Y2C4 368 aaKnown RBP4.89□□□□□ -1.63
VPS41-211ENST00000466017 RPL36Q9Y3U8 105 aaKnown RBP4.89□□□□□ -1.63
VPS41-211ENST00000466017 PCDHGB5Q9Y5G0 923 aa4.89□□□□□ -1.63
VPS41-211ENST00000466017 NOX1Q9Y5S8 564 aa4.89□□□□□ -1.63
VPS41-211ENST00000466017 IER3IP1Q9Y5U9 82 aa4.89□□□□□ -1.63
VPS41-211ENST00000466017 TNRC6AQ8NDV7 1962 aaKnown RBP4.88□□□□□ -1.63
VPS41-211ENST00000466017 TRAV27A0A087WT01 109 aa4.88□□□□□ -1.63
VPS41-211ENST00000466017 A0A0J9YW62 118 aa4.88□□□□□ -1.63
VPS41-211ENST00000466017 A6NIZ1 184 aa4.88□□□□□ -1.63
VPS41-211ENST00000466017 AQP7P3A6NL99 342 aa4.88□□□□□ -1.63
VPS41-211ENST00000466017 LRRN3E7EW58 273 aa4.88□□□□□ -1.63
VPS41-211ENST00000466017 BLOC1S5-TXNDC5H3BN57 136 aa4.88□□□□□ -1.63
VPS41-211ENST00000466017 SULT2B1O00204 365 aa4.88□□□□□ -1.63
VPS41-211ENST00000466017 TAF4O00268 1085 aa4.88□□□□□ -1.63
VPS41-211ENST00000466017 KPNA4O00629 521 aaPredicted RBP4.88□□□□□ -1.63
VPS41-211ENST00000466017 PRKYO43930 277 aa4.88□□□□□ -1.63
VPS41-211ENST00000466017 OR6A2O95222 327 aa4.88□□□□□ -1.63
VPS41-211ENST00000466017 LY86O95711 162 aa4.88□□□□□ -1.63
VPS41-211ENST00000466017 CRYABP02511 175 aaKnown RBP4.88□□□□□ -1.63
VPS41-211ENST00000466017 RPSAP08865 295 aaKnown RBP4.88□□□□□ -1.63
VPS41-211ENST00000466017 TFPIP10646 304 aa4.88□□□□□ -1.63
VPS41-211ENST00000466017 SFTPCP11686 197 aa4.88□□□□□ -1.63
VPS41-211ENST00000466017 IL11P20809 199 aa4.88□□□□□ -1.63
VPS41-211ENST00000466017 ACVR2AP27037 513 aa4.88□□□□□ -1.63
VPS41-211ENST00000466017 GDF1P27539 372 aa4.88□□□□□ -1.63
VPS41-211ENST00000466017 DCKP27707 260 aa4.88□□□□□ -1.63
VPS41-211ENST00000466017 HTR1FP30939 366 aa4.88□□□□□ -1.63
VPS41-211ENST00000466017 DIO1P49895 249 aa4.88□□□□□ -1.63
VPS41-211ENST00000466017 LHX2P50458 406 aa4.88□□□□□ -1.63
VPS41-211ENST00000466017 ZNF133P52736 654 aaPredicted RBP4.88□□□□□ -1.63
VPS41-211ENST00000466017 BLVRAP53004 296 aa4.88□□□□□ -1.63
VPS41-211ENST00000466017 SLC16A1P53985 500 aa4.88□□□□□ -1.63
VPS41-211ENST00000466017 CLDN15P56746 228 aa4.88□□□□□ -1.63
VPS41-211ENST00000466017 CARD18P57730 90 aa4.88□□□□□ -1.63
VPS41-211ENST00000466017 RAP1BP61224 184 aa4.88□□□□□ -1.63
VPS41-211ENST00000466017 RPS3AP61247 264 aaKnown RBP4.88□□□□□ -1.63
VPS41-211ENST00000466017 RPL27P61353 136 aaKnown RBP4.88□□□□□ -1.63
VPS41-211ENST00000466017 RAP1AP62834 184 aa4.88□□□□□ -1.63
VPS41-211ENST00000466017 PPIAP62937 165 aaKnown RBP4.88□□□□□ -1.63
VPS41-211ENST00000466017 PLGLB1Q02325 96 aa4.88□□□□□ -1.63
VPS41-211ENST00000466017 RPL18Q07020 188 aaKnown RBP4.88□□□□□ -1.63
VPS41-211ENST00000466017 PUDPQ08623 228 aa4.88□□□□□ -1.63
VPS41-211ENST00000466017 FOXD4Q12950 439 aaPredicted RBP4.88□□□□□ -1.63
VPS41-211ENST00000466017 MYBPHQ13203 477 aa4.88□□□□□ -1.63
VPS41-211ENST00000466017 ITGADQ13349 1161 aa4.88□□□□□ -1.63
VPS41-211ENST00000466017 PMS2P3Q13401 168 aa4.88□□□□□ -1.63
VPS41-211ENST00000466017 APOFQ13790 326 aa4.88□□□□□ -1.63
VPS41-211ENST00000466017 BLMHQ13867 455 aa4.88□□□□□ -1.63
VPS41-211ENST00000466017 ZNF169Q14929 603 aaPredicted RBP4.88□□□□□ -1.63
VPS41-211ENST00000466017 STK11Q15831 433 aa4.88□□□□□ -1.63
VPS41-211ENST00000466017 KLHL22Q53GT1 634 aa4.88□□□□□ -1.63
VPS41-211ENST00000466017 KRTCAP3Q53RY4 240 aa4.88□□□□□ -1.63
VPS41-211ENST00000466017 RAET1LQ5VY80 246 aa4.88□□□□□ -1.63
VPS41-211ENST00000466017 Q6ZRM9 215 aa4.88□□□□□ -1.63
VPS41-211ENST00000466017 TRILQ7L0X0 811 aa4.88□□□□□ -1.63
VPS41-211ENST00000466017 MEPCEQ7L2J0 689 aaKnown RBP4.88□□□□□ -1.63
VPS41-211ENST00000466017 PRSS48Q7RTY5 328 aa4.88□□□□□ -1.63
VPS41-211ENST00000466017 HDDC2Q7Z4H3 204 aa4.88□□□□□ -1.63
VPS41-211ENST00000466017 NANOGNBQ7Z5D8 188 aa4.88□□□□□ -1.63
VPS41-211ENST00000466017 ADCK1Q86TW2 530 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms