RNA–Protein interactions for RNA: ENST00000465860.5

EXOSC3-204, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-204ENST00000465860 OR6T1Q8NGN1 323 aa4.21□□□□□ -1.74
EXOSC3-204ENST00000465860 LILRB1Q8NHL6 650 aaPredicted RBP4.21□□□□□ -1.74
EXOSC3-204ENST00000465860 FAM222BQ8WU58 562 aa4.21□□□□□ -1.74
EXOSC3-204ENST00000465860 NEUROG1Q92886 237 aa4.21□□□□□ -1.74
EXOSC3-204ENST00000465860 S100PBPQ96BU1 408 aa4.21□□□□□ -1.74
EXOSC3-204ENST00000465860 LRRC58Q96CX6 371 aa4.21□□□□□ -1.74
EXOSC3-204ENST00000465860 RCN3Q96D15 328 aa4.21□□□□□ -1.74
EXOSC3-204ENST00000465860 KTI12Q96EK9 354 aaPredicted RBP4.21□□□□□ -1.74
EXOSC3-204ENST00000465860 DACH2Q96NX9 599 aa4.21□□□□□ -1.74
EXOSC3-204ENST00000465860 MOGAT1Q96PD6 335 aa4.21□□□□□ -1.74
EXOSC3-204ENST00000465860 ZNF385AQ96PM9 386 aaKnown RBP4.21□□□□□ -1.74
EXOSC3-204ENST00000465860 ARHGDIGQ99819 225 aa4.21□□□□□ -1.74
EXOSC3-204ENST00000465860 ELAC2Q9BQ52 826 aaKnown RBP4.21□□□□□ -1.74
EXOSC3-204ENST00000465860 SIKE1Q9BRV8 207 aa4.21□□□□□ -1.74
EXOSC3-204ENST00000465860 POLDIP3Q9BY77 421 aaKnown RBP4.21□□□□□ -1.74
EXOSC3-204ENST00000465860 FAM107BQ9H098 131 aa4.21□□□□□ -1.74
EXOSC3-204ENST00000465860 RAD21L1Q9H4I0 556 aa4.21□□□□□ -1.74
EXOSC3-204ENST00000465860 SERINC1Q9NRX5 453 aa4.21□□□□□ -1.74
EXOSC3-204ENST00000465860 THUMPD1Q9NXG2 353 aaKnown RBP4.21□□□□□ -1.74
EXOSC3-204ENST00000465860 NPAP1Q9NZP6 1156 aa4.21□□□□□ -1.74
EXOSC3-204ENST00000465860 CALML5Q9NZT1 146 aa4.21□□□□□ -1.74
EXOSC3-204ENST00000465860 TMEM181Q9P2C4 612 aa4.21□□□□□ -1.74
EXOSC3-204ENST00000465860 PLEKHA6Q9Y2H5 1048 aa4.21□□□□□ -1.74
EXOSC3-204ENST00000465860 IFT52Q9Y366 437 aa4.21□□□□□ -1.74
EXOSC3-204ENST00000465860 SNX13Q9Y5W8 968 aa4.21□□□□□ -1.74
EXOSC3-204ENST00000465860 FLVCR1Q9Y5Y0 555 aa4.21□□□□□ -1.74
EXOSC3-204ENST00000465860 USF3Q68DE3 2245 aa4.21□□□□□ -1.74
EXOSC3-204ENST00000465860 RTTNQ86VV8 2226 aa4.21□□□□□ -1.74
EXOSC3-204ENST00000465860 A0A0B4J2E0 115 aa4.2□□□□□ -1.74
EXOSC3-204ENST00000465860 A0A1B0GX12 115 aa4.2□□□□□ -1.74
EXOSC3-204ENST00000465860 TMEM247A6NEH6 219 aa4.2□□□□□ -1.74
EXOSC3-204ENST00000465860 AQP7P3A6NL99 342 aa4.2□□□□□ -1.74
EXOSC3-204ENST00000465860 CPSF4LA6NMK7 179 aaKnown RBP4.2□□□□□ -1.74
EXOSC3-204ENST00000465860 GJE1A6NN92 205 aa4.2□□□□□ -1.74
EXOSC3-204ENST00000465860 ZNF724A8MTY0 619 aa4.2□□□□□ -1.74
EXOSC3-204ENST00000465860 EVPLLA8MZ36 301 aa4.2□□□□□ -1.74
EXOSC3-204ENST00000465860 MS4A18H0YCH9 400 aa4.2□□□□□ -1.74
EXOSC3-204ENST00000465860 C16orf97H3BN30 126 aa4.2□□□□□ -1.74
EXOSC3-204ENST00000465860 PDLIM1O00151 329 aa4.2□□□□□ -1.74
EXOSC3-204ENST00000465860 SLC16A6O15403 523 aa4.2□□□□□ -1.74
EXOSC3-204ENST00000465860 ZNF208O43345 1280 aa4.2□□□□□ -1.74
EXOSC3-204ENST00000465860 SNX3O60493 162 aa4.2□□□□□ -1.74
EXOSC3-204ENST00000465860 SCGB1D2O95969 90 aa4.2□□□□□ -1.74
EXOSC3-204ENST00000465860 BGLAPP02818 100 aa4.2□□□□□ -1.74
EXOSC3-204ENST00000465860 ITGA5P08648 1049 aa4.2□□□□□ -1.74
EXOSC3-204ENST00000465860 HLA-DOBP13765 273 aa4.2□□□□□ -1.74
EXOSC3-204ENST00000465860 PSMB1P20618 241 aaKnown RBP4.2□□□□□ -1.74
EXOSC3-204ENST00000465860 CRYGSP22914 178 aa4.2□□□□□ -1.74
EXOSC3-204ENST00000465860 PPIBP23284 216 aaKnown RBP4.2□□□□□ -1.74
EXOSC3-204ENST00000465860 CXCR1P25024 350 aa4.2□□□□□ -1.74
EXOSC3-204ENST00000465860 PCGF2P35227 344 aa4.2□□□□□ -1.74
EXOSC3-204ENST00000465860 IDUAP35475 653 aa4.2□□□□□ -1.74
EXOSC3-204ENST00000465860 LIPAP38571 399 aa4.2□□□□□ -1.74
EXOSC3-204ENST00000465860 HTR3AP46098 478 aa4.2□□□□□ -1.74
EXOSC3-204ENST00000465860 OR1E2P47887 323 aa4.2□□□□□ -1.74
EXOSC3-204ENST00000465860 PCYT1AP49585 367 aa4.2□□□□□ -1.74
EXOSC3-204ENST00000465860 CLK1P49759 484 aaKnown RBP4.2□□□□□ -1.74
EXOSC3-204ENST00000465860 CSNK2A1P68400 391 aaPredicted RBP4.2□□□□□ -1.74
EXOSC3-204ENST00000465860 IRX1P78414 480 aaPredicted RBP4.2□□□□□ -1.74
EXOSC3-204ENST00000465860 SPOCK1Q08629 439 aa4.2□□□□□ -1.74
EXOSC3-204ENST00000465860 CYLC2Q14093 348 aaPredicted RBP4.2□□□□□ -1.74
EXOSC3-204ENST00000465860 RNPS1Q15287 305 aaKnown RBP4.2□□□□□ -1.74
EXOSC3-204ENST00000465860 TAB1Q15750 504 aa4.2□□□□□ -1.74
EXOSC3-204ENST00000465860 MS4A18Q3C1V0 323 aa4.2□□□□□ -1.74
EXOSC3-204ENST00000465860 ENTPD8Q5MY95 495 aa4.2□□□□□ -1.74
EXOSC3-204ENST00000465860 PHYHD1Q5SRE7 291 aa4.2□□□□□ -1.74
EXOSC3-204ENST00000465860 TSPO2Q5TGU0 170 aa4.2□□□□□ -1.74
EXOSC3-204ENST00000465860 C9orf135Q5VTT2 229 aa4.2□□□□□ -1.74
EXOSC3-204ENST00000465860 C1orf140Q5VVS0 124 aa4.2□□□□□ -1.74
EXOSC3-204ENST00000465860 C8orf82Q6P1X6 216 aaPredicted RBP4.2□□□□□ -1.74
EXOSC3-204ENST00000465860 ANKRD16Q6P6B7 361 aa4.2□□□□□ -1.74
EXOSC3-204ENST00000465860 NHLRC1Q6VVB1 395 aa4.2□□□□□ -1.74
EXOSC3-204ENST00000465860 Q6ZT83 130 aa4.2□□□□□ -1.74
EXOSC3-204ENST00000465860 CCDC80Q76M96 950 aa4.2□□□□□ -1.74
EXOSC3-204ENST00000465860 SPATA21Q7Z572 469 aa4.2□□□□□ -1.74
EXOSC3-204ENST00000465860 TSEN54Q7Z6J9 526 aaKnown RBP4.2□□□□□ -1.74
EXOSC3-204ENST00000465860 DTX2Q86UW9 622 aa4.2□□□□□ -1.74
EXOSC3-204ENST00000465860 ARMC8Q8IUR7 673 aa4.2□□□□□ -1.74
EXOSC3-204ENST00000465860 EPHX4Q8IUS5 362 aa4.2□□□□□ -1.74
EXOSC3-204ENST00000465860 SLC15A3Q8IY34 581 aa4.2□□□□□ -1.74
EXOSC3-204ENST00000465860 ZNF440Q8IYI8 595 aa4.2□□□□□ -1.74
EXOSC3-204ENST00000465860 SLC43A2Q8N370 569 aa4.2□□□□□ -1.74
EXOSC3-204ENST00000465860 ZNF433Q8N7K0 673 aaPredicted RBP4.2□□□□□ -1.74
EXOSC3-204ENST00000465860 LSMEM1Q8N8F7 131 aa4.2□□□□□ -1.74
EXOSC3-204ENST00000465860 C11orf65Q8NCR3 313 aa4.2□□□□□ -1.74
EXOSC3-204ENST00000465860 RBM15BQ8NDT2 890 aaKnown RBP4.2□□□□□ -1.74
EXOSC3-204ENST00000465860 VANGL1Q8TAA9 524 aaPredicted RBP4.2□□□□□ -1.74
EXOSC3-204ENST00000465860 SLC38A4Q969I6 547 aa4.2□□□□□ -1.74
EXOSC3-204ENST00000465860 SLC25A36Q96CQ1 311 aa4.2□□□□□ -1.74
EXOSC3-204ENST00000465860 DDIT4LQ96D03 193 aa4.2□□□□□ -1.74
EXOSC3-204ENST00000465860 PIK3IP1Q96FE7 263 aa4.2□□□□□ -1.74
EXOSC3-204ENST00000465860 REXO5Q96IC2 774 aaKnown RBP4.2□□□□□ -1.74
EXOSC3-204ENST00000465860 PRSS27Q9BQR3 290 aa4.2□□□□□ -1.74
EXOSC3-204ENST00000465860 MED18Q9BUE0 208 aa4.2□□□□□ -1.74
EXOSC3-204ENST00000465860 POTEKPQ9BYX7 375 aa4.2□□□□□ -1.74
EXOSC3-204ENST00000465860 ACTR6Q9GZN1 396 aa4.2□□□□□ -1.74
EXOSC3-204ENST00000465860 HHATLQ9HCP6 504 aa4.2□□□□□ -1.74
EXOSC3-204ENST00000465860 TIGARQ9NQ88 270 aa4.2□□□□□ -1.74
EXOSC3-204ENST00000465860 GLRX2Q9NS18 164 aa4.2□□□□□ -1.74
EXOSC3-204ENST00000465860 SLC7A10Q9NS82 523 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms