RNA–Protein interactions for RNA: ENST00000465036.1

UBR4-209, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 392 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-209ENST00000465036 NEK6Q9HC98 313 aa3.59□□□□□ -1.83
UBR4-209ENST00000465036 ACKR4Q9NPB9 350 aa3.59□□□□□ -1.83
UBR4-209ENST00000465036 FBXO6Q9NRD1 293 aaPredicted RBP3.59□□□□□ -1.83
UBR4-209ENST00000465036 HRASLS2Q9NWW9 162 aa3.59□□□□□ -1.83
UBR4-209ENST00000465036 SLC39A1Q9NY26 324 aa3.59□□□□□ -1.83
UBR4-209ENST00000465036 SPHK1Q9NYA1 384 aa3.59□□□□□ -1.83
UBR4-209ENST00000465036 BFARQ9NZS9 450 aa3.59□□□□□ -1.83
UBR4-209ENST00000465036 P2RX2Q9UBL9 471 aa3.59□□□□□ -1.83
UBR4-209ENST00000465036 SEC14L3Q9UDX4 400 aa3.59□□□□□ -1.83
UBR4-209ENST00000465036 B9D1Q9UPM9 204 aa3.59□□□□□ -1.83
UBR4-209ENST00000465036 SAR1BQ9Y6B6 198 aa3.59□□□□□ -1.83
UBR4-209ENST00000465036 CACNA1GO43497 2377 aa3.59□□□□□ -1.84
UBR4-209ENST00000465036 PIKFYVEQ9Y2I7 2098 aa3.58□□□□□ -1.84
UBR4-209ENST00000465036 TRAV26-1A0A087WT03 109 aa3.58□□□□□ -1.84
UBR4-209ENST00000465036 LOC101059948A0A1B0GTJ6 334 aa3.58□□□□□ -1.84
UBR4-209ENST00000465036 METTL21EPA6NDL7 271 aa3.58□□□□□ -1.84
UBR4-209ENST00000465036 E5RGE8 158 aa3.58□□□□□ -1.84
UBR4-209ENST00000465036 NPIPA2E9PIF3 369 aa3.58□□□□□ -1.84
UBR4-209ENST00000465036 FOXE1O00358 373 aaPredicted RBP3.58□□□□□ -1.84
UBR4-209ENST00000465036 PRMT5O14744 637 aaPredicted RBP3.58□□□□□ -1.84
UBR4-209ENST00000465036 LIN7AO14910 233 aaPredicted RBP3.58□□□□□ -1.84
UBR4-209ENST00000465036 ARPC3O15145 178 aa3.58□□□□□ -1.84
UBR4-209ENST00000465036 POLR1CO15160 346 aaPredicted RBP3.58□□□□□ -1.84
UBR4-209ENST00000465036 RRP8O43159 456 aaKnown RBP3.58□□□□□ -1.84
UBR4-209ENST00000465036 AKR7A2O43488 359 aa3.58□□□□□ -1.84
UBR4-209ENST00000465036 SYT7O43581 403 aa3.58□□□□□ -1.84
UBR4-209ENST00000465036 LCMT2O60294 686 aaKnown RBP3.58□□□□□ -1.84
UBR4-209ENST00000465036 SAP30O75446 220 aa3.58□□□□□ -1.84
UBR4-209ENST00000465036 PIAS1O75925 651 aa3.58□□□□□ -1.84
UBR4-209ENST00000465036 BMP10O95393 424 aa3.58□□□□□ -1.84
UBR4-209ENST00000465036 RAF1P04049 648 aa3.58□□□□□ -1.84
UBR4-209ENST00000465036 OR56A5P0C7T3 313 aa3.58□□□□□ -1.84
UBR4-209ENST00000465036 OR8G3PP0DMU2 310 aa3.58□□□□□ -1.84
UBR4-209ENST00000465036 PNMTP11086 282 aa3.58□□□□□ -1.84
UBR4-209ENST00000465036 LIPCP11150 499 aa3.58□□□□□ -1.84
UBR4-209ENST00000465036 MLNP12872 115 aa3.58□□□□□ -1.84
UBR4-209ENST00000465036 EZRP15311 586 aaKnown RBP3.58□□□□□ -1.84
UBR4-209ENST00000465036 NELFEP18615 380 aaKnown RBP3.58□□□□□ -1.84
UBR4-209ENST00000465036 UQCRC2P22695 453 aa3.58□□□□□ -1.84
UBR4-209ENST00000465036 EPHA2P29317 976 aa3.58□□□□□ -1.84
UBR4-209ENST00000465036 PRDX3P30048 256 aaKnown RBP3.58□□□□□ -1.84
UBR4-209ENST00000465036 SRD5A2P31213 254 aa3.58□□□□□ -1.84
UBR4-209ENST00000465036 MNDAP41218 407 aa3.58□□□□□ -1.84
UBR4-209ENST00000465036 SLC1A2P43004 574 aa3.58□□□□□ -1.84
UBR4-209ENST00000465036 BDKRB1P46663 353 aa3.58□□□□□ -1.84
UBR4-209ENST00000465036 DR1Q01658 176 aa3.58□□□□□ -1.84
UBR4-209ENST00000465036 FGL1Q08830 312 aa3.58□□□□□ -1.84
UBR4-209ENST00000465036 C2orf54Q08AI8 447 aa3.58□□□□□ -1.84
UBR4-209ENST00000465036 ZNF415Q09FC8 603 aa3.58□□□□□ -1.84
UBR4-209ENST00000465036 CUL1Q13616 776 aa3.58□□□□□ -1.84
UBR4-209ENST00000465036 FASTKD3Q14CZ7 662 aaKnown RBP3.58□□□□□ -1.84
UBR4-209ENST00000465036 P2RY14Q15391 338 aa3.58□□□□□ -1.84
UBR4-209ENST00000465036 ZIC1Q15915 447 aa3.58□□□□□ -1.84
UBR4-209ENST00000465036 CLPPQ16740 277 aaPredicted RBP3.58□□□□□ -1.84
UBR4-209ENST00000465036 DEFB110Q30KQ9 67 aa3.58□□□□□ -1.84
UBR4-209ENST00000465036 GTDC1Q4AE62 458 aa3.58□□□□□ -1.84
UBR4-209ENST00000465036 ACSBG2Q5FVE4 666 aa3.58□□□□□ -1.84
UBR4-209ENST00000465036 SPANXN2Q5MJ10 180 aa3.58□□□□□ -1.84
UBR4-209ENST00000465036 ATP1A1-AS1Q5TC04 95 aa3.58□□□□□ -1.84
UBR4-209ENST00000465036 ZNF470Q6ECI4 717 aa3.58□□□□□ -1.84
UBR4-209ENST00000465036 PYHIN1Q6K0P9 492 aa3.58□□□□□ -1.84
UBR4-209ENST00000465036 NEPROQ6NW34 567 aa3.58□□□□□ -1.84
UBR4-209ENST00000465036 FAM199XQ6PEV8 388 aaPredicted RBP3.58□□□□□ -1.84
UBR4-209ENST00000465036 C4orf22Q6V702 233 aa3.58□□□□□ -1.84
UBR4-209ENST00000465036 KRTAP5-5Q701N2 237 aaPredicted RBP3.58□□□□□ -1.84
UBR4-209ENST00000465036 NLRP9Q7RTR0 991 aa3.58□□□□□ -1.84
UBR4-209ENST00000465036 TRPM8Q7Z2W7 1104 aa3.58□□□□□ -1.84
UBR4-209ENST00000465036 TMEM135Q86UB9 458 aa3.58□□□□□ -1.84
UBR4-209ENST00000465036 MMD2Q8IY49 270 aa3.58□□□□□ -1.84
UBR4-209ENST00000465036 SLC22A15Q8IZD6 547 aa3.58□□□□□ -1.84
UBR4-209ENST00000465036 OFCC1Q8IZS5 231 aa3.58□□□□□ -1.84
UBR4-209ENST00000465036 COMMD1Q8N668 190 aa3.58□□□□□ -1.84
UBR4-209ENST00000465036 LINC01555Q8NAE3 123 aa3.58□□□□□ -1.84
UBR4-209ENST00000465036 NOA1Q8NC60 698 aaKnown RBP3.58□□□□□ -1.84
UBR4-209ENST00000465036 PPFIBP2Q8ND30 876 aa3.58□□□□□ -1.84
UBR4-209ENST00000465036 NPEPL1Q8NDH3 523 aa3.58□□□□□ -1.84
UBR4-209ENST00000465036 SPATA4Q8NEY3 305 aa3.58□□□□□ -1.84
UBR4-209ENST00000465036 BBS1Q8NFJ9 593 aa3.58□□□□□ -1.84
UBR4-209ENST00000465036 OR2T12Q8NG77 320 aa3.58□□□□□ -1.84
UBR4-209ENST00000465036 FLVCR1-AS1Q8TAF5 88 aa3.58□□□□□ -1.84
UBR4-209ENST00000465036 RNF128Q8TEB7 428 aa3.58□□□□□ -1.84
UBR4-209ENST00000465036 LCN9Q8WX39 176 aa3.58□□□□□ -1.84
UBR4-209ENST00000465036 SLCO2A1Q92959 643 aa3.58□□□□□ -1.84
UBR4-209ENST00000465036 TBRG4Q969Z0 631 aaKnown RBP eCLIP3.58□□□□□ -1.84
UBR4-209ENST00000465036 TMEM45BQ96B21 275 aa3.58□□□□□ -1.84
UBR4-209ENST00000465036 TMIGD2Q96BF3 282 aa3.58□□□□□ -1.84
UBR4-209ENST00000465036 CXorf58Q96LI9 332 aa3.58□□□□□ -1.84
UBR4-209ENST00000465036 RHNO1Q9BSD3 238 aa3.58□□□□□ -1.84
UBR4-209ENST00000465036 ALKBH7Q9BT30 221 aaPredicted RBP3.58□□□□□ -1.84
UBR4-209ENST00000465036 FUNDC2Q9BWH2 189 aa3.58□□□□□ -1.84
UBR4-209ENST00000465036 MRM3Q9HC36 420 aaKnown RBP3.58□□□□□ -1.84
UBR4-209ENST00000465036 FAM60AQ9NP50 221 aa3.58□□□□□ -1.84
UBR4-209ENST00000465036 EPHA6Q9UF33 1036 aa3.58□□□□□ -1.84
UBR4-209ENST00000465036 PCYOX1Q9UHG3 505 aa3.58□□□□□ -1.84
UBR4-209ENST00000465036 PILRAQ9UKJ1 303 aa3.58□□□□□ -1.84
UBR4-209ENST00000465036 ASF1AQ9Y294 204 aa3.58□□□□□ -1.84
UBR4-209ENST00000465036 NSG2Q9Y328 171 aa3.58□□□□□ -1.84
UBR4-209ENST00000465036 SNX24Q9Y343 169 aa3.58□□□□□ -1.84
UBR4-209ENST00000465036 IFT52Q9Y366 437 aa3.58□□□□□ -1.84
UBR4-209ENST00000465036 MRPS18BQ9Y676 258 aaKnown RBP3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms