RNA–Protein interactions for RNA: ENST00000464493.5

SQSTM1-205, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-205ENST00000464493 ARPC4-TTLL3A0A0A6YYG9 625 aa12.69□□□□□ -0.38
SQSTM1-205ENST00000464493 A0A1W2PPR1 153 aa12.69□□□□□ -0.38
SQSTM1-205ENST00000464493 DPRXA6NFQ7 191 aa12.69□□□□□ -0.38
SQSTM1-205ENST00000464493 ARHGEF9O43307 516 aa12.69□□□□□ -0.38
SQSTM1-205ENST00000464493 DHHO43323 396 aa12.69□□□□□ -0.38
SQSTM1-205ENST00000464493 CD3EP07766 207 aa12.69□□□□□ -0.38
SQSTM1-205ENST00000464493 PAX7P23759 505 aa12.69□□□□□ -0.38
SQSTM1-205ENST00000464493 ZNF83P51522 516 aa12.69□□□□□ -0.38
SQSTM1-205ENST00000464493 FXYD6P3P58550 94 aa12.69□□□□□ -0.38
SQSTM1-205ENST00000464493 MYBPC1Q00872 1141 aa12.69□□□□□ -0.38
SQSTM1-205ENST00000464493 BSPH1Q075Z2 132 aa12.69□□□□□ -0.38
SQSTM1-205ENST00000464493 CCNIQ14094 377 aa12.69□□□□□ -0.38
SQSTM1-205ENST00000464493 THEM4Q5T1C6 240 aa12.69□□□□□ -0.38
SQSTM1-205ENST00000464493 ZNF813Q6ZN06 617 aa12.69□□□□□ -0.38
SQSTM1-205ENST00000464493 ZNF627Q7L945 461 aa12.69□□□□□ -0.38
SQSTM1-205ENST00000464493 CCDC36Q8IYA8 594 aa12.69□□□□□ -0.38
SQSTM1-205ENST00000464493 AQP11Q8NBQ7 271 aa12.69□□□□□ -0.38
SQSTM1-205ENST00000464493 FANK1Q8TC84 345 aa12.69□□□□□ -0.38
SQSTM1-205ENST00000464493 Q96M85 177 aa12.69□□□□□ -0.38
SQSTM1-205ENST00000464493 RBP7Q96R05 134 aa12.69□□□□□ -0.38
SQSTM1-205ENST00000464493 FOXB1Q99853 325 aa12.69□□□□□ -0.38
SQSTM1-205ENST00000464493 ALG12Q9BV10 488 aa12.69□□□□□ -0.38
SQSTM1-205ENST00000464493 PLEKHF2Q9H8W4 249 aa12.69□□□□□ -0.38
SQSTM1-205ENST00000464493 NRIP3Q9NQ35 241 aa12.69□□□□□ -0.38
SQSTM1-205ENST00000464493 DNAJB9Q9UBS3 223 aa12.69□□□□□ -0.38
SQSTM1-205ENST00000464493 AKAP6Q13023 2319 aa12.68□□□□□ -0.38
SQSTM1-205ENST00000464493 M0R1B8 84 aa12.68□□□□□ -0.38
SQSTM1-205ENST00000464493 XKRYO14609 159 aa12.68□□□□□ -0.38
SQSTM1-205ENST00000464493 SEC14L2O76054 403 aa12.68□□□□□ -0.38
SQSTM1-205ENST00000464493 NR2C1P13056 603 aa12.68□□□□□ -0.38
SQSTM1-205ENST00000464493 B4GALT1P15291 398 aa12.68□□□□□ -0.38
SQSTM1-205ENST00000464493 SDHAP31040 664 aa12.68□□□□□ -0.38
SQSTM1-205ENST00000464493 SLC6A6P31641 620 aa12.68□□□□□ -0.38
SQSTM1-205ENST00000464493 ZNF84P51523 738 aa12.68□□□□□ -0.38
SQSTM1-205ENST00000464493 RPS6KA3P51812 740 aa12.68□□□□□ -0.38
SQSTM1-205ENST00000464493 ZNF133P52736 654 aaPredicted RBP12.68□□□□□ -0.38
SQSTM1-205ENST00000464493 IST1P53990 364 aa12.68□□□□□ -0.38
SQSTM1-205ENST00000464493 TUBA1BP68363 451 aa12.68□□□□□ -0.38
SQSTM1-205ENST00000464493 TUBA4AP68366 448 aa12.68□□□□□ -0.38
SQSTM1-205ENST00000464493 CD47Q08722 323 aa12.68□□□□□ -0.38
SQSTM1-205ENST00000464493 GPR139Q6DWJ6 353 aa12.68□□□□□ -0.38
SQSTM1-205ENST00000464493 TMEM108Q6UXF1 575 aa12.68□□□□□ -0.38
SQSTM1-205ENST00000464493 TUBA1AQ71U36 451 aa12.68□□□□□ -0.38
SQSTM1-205ENST00000464493 FAM122BQ7Z309 247 aa12.68□□□□□ -0.38
SQSTM1-205ENST00000464493 CLDN22Q8N7P3 220 aa12.68□□□□□ -0.38
SQSTM1-205ENST00000464493 OR10G2Q8NGC3 310 aa12.68□□□□□ -0.38
SQSTM1-205ENST00000464493 FNDC8Q8TC99 324 aa12.68□□□□□ -0.38
SQSTM1-205ENST00000464493 GIPC3Q8TF64 312 aa12.68□□□□□ -0.38
SQSTM1-205ENST00000464493 NRGNQ92686 78 aa12.68□□□□□ -0.38
SQSTM1-205ENST00000464493 NMD3Q96D46 503 aaKnown RBP12.68□□□□□ -0.38
SQSTM1-205ENST00000464493 SAMD8Q96LT4 415 aa12.68□□□□□ -0.38
SQSTM1-205ENST00000464493 ZNF570Q96NI8 536 aa12.68□□□□□ -0.38
SQSTM1-205ENST00000464493 TMEM204Q9BSN7 226 aa12.68□□□□□ -0.38
SQSTM1-205ENST00000464493 DGCR6LQ9BY27 220 aa12.68□□□□□ -0.38
SQSTM1-205ENST00000464493 OR52D1Q9H346 318 aa12.68□□□□□ -0.38
SQSTM1-205ENST00000464493 SMURF2Q9HAU4 748 aa12.68□□□□□ -0.38
SQSTM1-205ENST00000464493 MGAT4BQ9UQ53 548 aa12.68□□□□□ -0.38
SQSTM1-205ENST00000464493 RNF115Q9Y4L5 304 aa12.68□□□□□ -0.38
SQSTM1-205ENST00000464493 IER3IP1Q9Y5U9 82 aa12.68□□□□□ -0.38
SQSTM1-205ENST00000464493 MAST4O15021 2626 aa12.68□□□□□ -0.38
SQSTM1-205ENST00000464493 ANKRD17O75179 2603 aaKnown RBP12.68□□□□□ -0.38
SQSTM1-205ENST00000464493 ROS1P08922 2347 aa12.67□□□□□ -0.38
SQSTM1-205ENST00000464493 HEATR1Q9H583 2144 aaKnown RBP12.67□□□□□ -0.38
SQSTM1-205ENST00000464493 AHCYL1O43865 530 aa12.67□□□□□ -0.38
SQSTM1-205ENST00000464493 ENTPD5O75356 428 aa12.67□□□□□ -0.38
SQSTM1-205ENST00000464493 E2F6O75461 281 aa12.67□□□□□ -0.38
SQSTM1-205ENST00000464493 TIPRLO75663 272 aa12.67□□□□□ -0.38
SQSTM1-205ENST00000464493 SLC2A10O95528 541 aa12.67□□□□□ -0.38
SQSTM1-205ENST00000464493 PLAUP00749 431 aa12.67□□□□□ -0.38
SQSTM1-205ENST00000464493 APEHP13798 732 aaKnown RBP12.67□□□□□ -0.38
SQSTM1-205ENST00000464493 PTAFRP25105 342 aa12.67□□□□□ -0.38
SQSTM1-205ENST00000464493 CD40P25942 277 aa12.67□□□□□ -0.38
SQSTM1-205ENST00000464493 CAPZA2P47755 286 aa12.67□□□□□ -0.38
SQSTM1-205ENST00000464493 C10orf128Q5T292 105 aa12.67□□□□□ -0.38
SQSTM1-205ENST00000464493 ZNF704Q6ZNC4 412 aaPredicted RBP12.67□□□□□ -0.38
SQSTM1-205ENST00000464493 ZNF620Q6ZNG0 422 aa12.67□□□□□ -0.38
SQSTM1-205ENST00000464493 TMEM179BQ7Z7N9 219 aa12.67□□□□□ -0.38
SQSTM1-205ENST00000464493 SLC22A24Q8N4F4 322 aa12.67□□□□□ -0.38
SQSTM1-205ENST00000464493 GTPBP3Q969Y2 492 aaKnown RBP12.67□□□□□ -0.38
SQSTM1-205ENST00000464493 RASD2Q96D21 266 aa12.67□□□□□ -0.38
SQSTM1-205ENST00000464493 DUS3LQ96G46 650 aaKnown RBP12.67□□□□□ -0.38
SQSTM1-205ENST00000464493 ERMAPQ96PL5 475 aaPredicted RBP12.67□□□□□ -0.38
SQSTM1-205ENST00000464493 FEVQ99581 238 aa12.67□□□□□ -0.38
SQSTM1-205ENST00000464493 LIME1Q9H400 295 aa12.67□□□□□ -0.38
SQSTM1-205ENST00000464493 MOV10Q9HCE1 1003 aaKnown RBP12.67□□□□□ -0.38
SQSTM1-205ENST00000464493 ARMC1Q9NVT9 282 aa12.67□□□□□ -0.38
SQSTM1-205ENST00000464493 TMEM38BQ9NVV0 291 aa12.67□□□□□ -0.38
SQSTM1-205ENST00000464493 EDARQ9UNE0 448 aa12.67□□□□□ -0.38
SQSTM1-205ENST00000464493 AP4S1Q9Y587 144 aa12.67□□□□□ -0.38
SQSTM1-205ENST00000464493 CADP27708 2225 aa12.67□□□□□ -0.38
SQSTM1-205ENST00000464493 IGKV1D-43A0A0B4J1Z2 117 aa12.66□□□□□ -0.38
SQSTM1-205ENST00000464493 TEX13CA0A0J9YWL9 993 aa12.66□□□□□ -0.38
SQSTM1-205ENST00000464493 PRSS37A4D1T9 235 aa12.66□□□□□ -0.38
SQSTM1-205ENST00000464493 ARRDC5A6NEK1 342 aa12.66□□□□□ -0.38
SQSTM1-205ENST00000464493 SOCS2O14508 198 aa12.66□□□□□ -0.38
SQSTM1-205ENST00000464493 ABCD4O14678 606 aa12.66□□□□□ -0.38
SQSTM1-205ENST00000464493 IMPA2O14732 288 aa12.66□□□□□ -0.38
SQSTM1-205ENST00000464493 DEAF1O75398 565 aaPredicted RBP12.66□□□□□ -0.38
SQSTM1-205ENST00000464493 PPP1R3DO95685 299 aa12.66□□□□□ -0.38
SQSTM1-205ENST00000464493 TXNDC12O95881 172 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms