RNA–Protein interactions for RNA: ENST00000464454.1

CLK1-208, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 484 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-208ENST00000464454 RAET1LQ5VY80 246 aa2.67□□□□□ -1.98
CLK1-208ENST00000464454 CARD17Q5XLA6 110 aa2.67□□□□□ -1.98
CLK1-208ENST00000464454 ZNF836Q6ZNA1 936 aa2.67□□□□□ -1.98
CLK1-208ENST00000464454 NIPA1Q7RTP0 329 aa2.67□□□□□ -1.98
CLK1-208ENST00000464454 TMEM183AQ8IXX5 376 aa2.67□□□□□ -1.98
CLK1-208ENST00000464454 MS4A15Q8N5U1 240 aa2.67□□□□□ -1.98
CLK1-208ENST00000464454 EID2Q8N6I1 236 aa2.67□□□□□ -1.98
CLK1-208ENST00000464454 ZNF433Q8N7K0 673 aaPredicted RBP2.67□□□□□ -1.98
CLK1-208ENST00000464454 DUSP18Q8NEJ0 188 aa2.67□□□□□ -1.98
CLK1-208ENST00000464454 OR7G2Q8NG99 324 aa2.67□□□□□ -1.98
CLK1-208ENST00000464454 CXorf40AQ8TE69 158 aa2.67□□□□□ -1.98
CLK1-208ENST00000464454 TMEM158Q8WZ71 300 aa2.67□□□□□ -1.98
CLK1-208ENST00000464454 TMEM54Q969K7 222 aa2.67□□□□□ -1.98
CLK1-208ENST00000464454 ASB9Q96DX5 294 aa2.67□□□□□ -1.98
CLK1-208ENST00000464454 CCDC126Q96EE4 140 aa2.67□□□□□ -1.98
CLK1-208ENST00000464454 TSNARE1Q96NA8 513 aa2.67□□□□□ -1.98
CLK1-208ENST00000464454 ATP5SQ99766 215 aa2.67□□□□□ -1.98
CLK1-208ENST00000464454 SLC25A39Q9BZJ4 359 aaPredicted RBP2.67□□□□□ -1.98
CLK1-208ENST00000464454 DNTTIP1Q9H147 329 aa2.67□□□□□ -1.98
CLK1-208ENST00000464454 UGT1A7Q9HAW7 530 aa2.67□□□□□ -1.98
CLK1-208ENST00000464454 UGT1A10Q9HAW8 530 aa2.67□□□□□ -1.98
CLK1-208ENST00000464454 UGT1A8Q9HAW9 530 aa2.67□□□□□ -1.98
CLK1-208ENST00000464454 DMAP1Q9NPF5 467 aaPredicted RBP2.67□□□□□ -1.98
CLK1-208ENST00000464454 SHPKQ9UHJ6 478 aa2.67□□□□□ -1.98
CLK1-208ENST00000464454 PRG3Q9Y2Y8 225 aaPredicted RBP2.67□□□□□ -1.98
CLK1-208ENST00000464454 ZNFX1Q9P2E3 1918 aaKnown RBP2.67□□□□□ -1.98
CLK1-208ENST00000464454 MTCL1Q9Y4B5 1905 aaKnown RBP2.66□□□□□ -1.98
CLK1-208ENST00000464454 CEMIPQ8WUJ3 1361 aa2.66□□□□□ -1.98
CLK1-208ENST00000464454 TRAV39A0A0B4J263 110 aa2.66□□□□□ -1.98
CLK1-208ENST00000464454 C9JVG2 144 aa2.66□□□□□ -1.98
CLK1-208ENST00000464454 SUPT3HO75486 399 aa2.66□□□□□ -1.98
CLK1-208ENST00000464454 AGTP01019 485 aa2.66□□□□□ -1.98
CLK1-208ENST00000464454 BGLAPP02818 100 aa2.66□□□□□ -1.98
CLK1-208ENST00000464454 ZDHHC11BP0C7U3 371 aa2.66□□□□□ -1.98
CLK1-208ENST00000464454 CNR1P21554 472 aa2.66□□□□□ -1.98
CLK1-208ENST00000464454 AK4P27144 223 aaPredicted RBP2.66□□□□□ -1.98
CLK1-208ENST00000464454 HOXA9P31269 272 aa2.66□□□□□ -1.98
CLK1-208ENST00000464454 SERPINB5P36952 375 aa2.66□□□□□ -1.98
CLK1-208ENST00000464454 SSR4P51571 173 aa2.66□□□□□ -1.98
CLK1-208ENST00000464454 CCR6P51684 374 aa2.66□□□□□ -1.98
CLK1-208ENST00000464454 CCNHP51946 323 aaPredicted RBP2.66□□□□□ -1.98
CLK1-208ENST00000464454 CRISP3P54108 245 aa2.66□□□□□ -1.98
CLK1-208ENST00000464454 CDH6P55285 790 aa2.66□□□□□ -1.98
CLK1-208ENST00000464454 PRMT2P55345 433 aa2.66□□□□□ -1.98
CLK1-208ENST00000464454 BEX3Q00994 111 aa2.66□□□□□ -1.98
CLK1-208ENST00000464454 HMGCS1Q01581 520 aa2.66□□□□□ -1.98
CLK1-208ENST00000464454 MECOMQ03112 1051 aa2.66□□□□□ -1.98
CLK1-208ENST00000464454 ECH1Q13011 328 aa2.66□□□□□ -1.98
CLK1-208ENST00000464454 SRSF5Q13243 272 aaKnown RBP2.66□□□□□ -1.98
CLK1-208ENST00000464454 PRPSAP1Q14558 356 aa2.66□□□□□ -1.98
CLK1-208ENST00000464454 HSP90AB3PQ58FF7 597 aa2.66□□□□□ -1.98
CLK1-208ENST00000464454 VAX1Q5SQQ9 334 aa2.66□□□□□ -1.98
CLK1-208ENST00000464454 LCE3AQ5TA76 89 aa2.66□□□□□ -1.98
CLK1-208ENST00000464454 SLC8B1Q6J4K2 584 aa2.66□□□□□ -1.98
CLK1-208ENST00000464454 METAP1DQ6UB28 335 aaPredicted RBP2.66□□□□□ -1.98
CLK1-208ENST00000464454 TMEM179Q6ZVK1 233 aa2.66□□□□□ -1.98
CLK1-208ENST00000464454 ASCL5Q7RTU5 278 aa2.66□□□□□ -1.98
CLK1-208ENST00000464454 TTC5Q8N0Z6 440 aa2.66□□□□□ -1.98
CLK1-208ENST00000464454 BBS5Q8N3I7 341 aa2.66□□□□□ -1.98
CLK1-208ENST00000464454 MREGQ8N565 214 aa2.66□□□□□ -1.98
CLK1-208ENST00000464454 HSD17B11Q8NBQ5 300 aa2.66□□□□□ -1.98
CLK1-208ENST00000464454 OR1S2Q8NGQ3 325 aa2.66□□□□□ -1.98
CLK1-208ENST00000464454 ACTRT1Q8TDG2 376 aa2.66□□□□□ -1.98
CLK1-208ENST00000464454 CD300LFQ8TDQ1 290 aa2.66□□□□□ -1.98
CLK1-208ENST00000464454 DNAJC19Q96DA6 116 aa2.66□□□□□ -1.98
CLK1-208ENST00000464454 PIK3IP1Q96FE7 263 aa2.66□□□□□ -1.98
CLK1-208ENST00000464454 ZNF578Q96N58 590 aaPredicted RBP2.66□□□□□ -1.98
CLK1-208ENST00000464454 ZNF285Q96NJ3 590 aa2.66□□□□□ -1.98
CLK1-208ENST00000464454 TSSK3Q96PN8 268 aa2.66□□□□□ -1.98
CLK1-208ENST00000464454 P2RX4Q99571 388 aa2.66□□□□□ -1.98
CLK1-208ENST00000464454 GABARAPL3Q9BY60 117 aa2.66□□□□□ -1.98
CLK1-208ENST00000464454 FAM192AQ9GZU8 254 aa2.66□□□□□ -1.98
CLK1-208ENST00000464454 CWH43Q9H720 699 aa2.66□□□□□ -1.98
CLK1-208ENST00000464454 MYOZ2Q9NPC6 264 aa2.66□□□□□ -1.98
CLK1-208ENST00000464454 SLCO1B3Q9NPD5 702 aa2.66□□□□□ -1.98
CLK1-208ENST00000464454 DCAF16Q9NXF7 216 aa2.66□□□□□ -1.98
CLK1-208ENST00000464454 CTNNA3Q9UI47 895 aa2.66□□□□□ -1.98
CLK1-208ENST00000464454 WSB1Q9Y6I7 421 aa2.66□□□□□ -1.98
CLK1-208ENST00000464454 NFASCO94856 1347 aa2.66□□□□□ -1.98
CLK1-208ENST00000464454 MAP3K15Q6ZN16 1313 aa2.66□□□□□ -1.98
CLK1-208ENST00000464454 CENPJQ9HC77 1338 aaPredicted RBP2.66□□□□□ -1.98
CLK1-208ENST00000464454 LRRIQ3A6PVS8 624 aaPredicted RBP2.65□□□□□ -1.99
CLK1-208ENST00000464454 AIM2O14862 343 aa2.65□□□□□ -1.99
CLK1-208ENST00000464454 MRPS12O15235 138 aaKnown RBP2.65□□□□□ -1.99
CLK1-208ENST00000464454 CLOCKO15516 846 aa2.65□□□□□ -1.99
CLK1-208ENST00000464454 SS18L1O75177 396 aaPredicted RBP2.65□□□□□ -1.99
CLK1-208ENST00000464454 CLIC3O95833 236 aa2.65□□□□□ -1.99
CLK1-208ENST00000464454 C6orf47O95873 294 aa2.65□□□□□ -1.99
CLK1-208ENST00000464454 CALM1P0DP23 149 aa2.65□□□□□ -1.99
CLK1-208ENST00000464454 CALM2P0DP24 149 aa2.65□□□□□ -1.99
CLK1-208ENST00000464454 CALM3P0DP25 149 aa2.65□□□□□ -1.99
CLK1-208ENST00000464454 FOXN2P32314 431 aa2.65□□□□□ -1.99
CLK1-208ENST00000464454 NAA10P41227 235 aaPredicted RBP2.65□□□□□ -1.99
CLK1-208ENST00000464454 NSG1P42857 185 aa2.65□□□□□ -1.99
CLK1-208ENST00000464454 CLINT1Q14677 625 aa2.65□□□□□ -1.99
CLK1-208ENST00000464454 RCN1Q15293 331 aa2.65□□□□□ -1.99
CLK1-208ENST00000464454 SASS6Q6UVJ0 657 aa2.65□□□□□ -1.99
CLK1-208ENST00000464454 LINC00173Q6ZV60 143 aa2.65□□□□□ -1.99
CLK1-208ENST00000464454 PDIK1LQ8N165 341 aa2.65□□□□□ -1.99
CLK1-208ENST00000464454 Q8N9L7 120 aa2.65□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms