RNA–Protein interactions for RNA: ENST00000464012.1

CCHCR1-210, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 2

Gene CCHCR1, Length 512 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-210ENST00000464012 SELENOWP63302 87 aa16.64■□□□□ 0.25
CCHCR1-210ENST00000464012 VLDLRP98155 873 aa16.64■□□□□ 0.25
CCHCR1-210ENST00000464012 GALK2Q01415 458 aa16.64■□□□□ 0.25
CCHCR1-210ENST00000464012 LIPEQ05469 1076 aa16.64■□□□□ 0.25
CCHCR1-210ENST00000464012 GKAP1Q5VSY0 366 aaPredicted RBP16.64■□□□□ 0.25
CCHCR1-210ENST00000464012 VTCN1Q7Z7D3 282 aa16.64■□□□□ 0.25
CCHCR1-210ENST00000464012 OR4K5Q8NGD3 323 aa16.64■□□□□ 0.25
CCHCR1-210ENST00000464012 ASB10Q8WXI3 467 aa16.64■□□□□ 0.25
CCHCR1-210ENST00000464012 LZICQ8WZA0 190 aa16.64■□□□□ 0.25
CCHCR1-210ENST00000464012 PRRC1Q96M27 445 aa16.64■□□□□ 0.25
CCHCR1-210ENST00000464012 TPK1Q9H3S4 243 aa16.64■□□□□ 0.25
CCHCR1-210ENST00000464012 RNF121Q9H920 327 aa16.64■□□□□ 0.25
CCHCR1-210ENST00000464012 RHCGQ9UBD6 479 aa16.64■□□□□ 0.25
CCHCR1-210ENST00000464012 SPEF1Q9Y4P9 236 aa16.64■□□□□ 0.25
CCHCR1-210ENST00000464012 GSTA4O15217 222 aa16.63■□□□□ 0.25
CCHCR1-210ENST00000464012 CCDC22O60826 627 aa16.63■□□□□ 0.25
CCHCR1-210ENST00000464012 TRMUO75648 421 aaKnown RBP16.63■□□□□ 0.25
CCHCR1-210ENST00000464012 FARS2O95363 451 aaKnown RBP16.63■□□□□ 0.25
CCHCR1-210ENST00000464012 ERCC1P07992 297 aaPredicted RBP16.63■□□□□ 0.25
CCHCR1-210ENST00000464012 THRBP10828 461 aa16.63■□□□□ 0.25
CCHCR1-210ENST00000464012 IFI30P13284 250 aa16.63■□□□□ 0.25
CCHCR1-210ENST00000464012 ZNF35P13682 527 aa16.63■□□□□ 0.25
CCHCR1-210ENST00000464012 IFNA8P32881 189 aa16.63■□□□□ 0.25
CCHCR1-210ENST00000464012 NR4A2P43354 598 aa16.63■□□□□ 0.25
CCHCR1-210ENST00000464012 DAP3P51398 398 aaKnown RBP16.63■□□□□ 0.25
CCHCR1-210ENST00000464012 ZNF84P51523 738 aa16.63■□□□□ 0.25
CCHCR1-210ENST00000464012 SLC7A2P52569 658 aa16.63■□□□□ 0.25
CCHCR1-210ENST00000464012 LSM11P83369 360 aaKnown RBP eCLIP16.63■□□□□ 0.25
CCHCR1-210ENST00000464012 ST3GAL3Q11203 375 aa16.63■□□□□ 0.25
CCHCR1-210ENST00000464012 TOP3AQ13472 1001 aaPredicted RBP16.63■□□□□ 0.25
CCHCR1-210ENST00000464012 MSMPQ1L6U9 139 aa16.63■□□□□ 0.25
CCHCR1-210ENST00000464012 MEX3DQ86XN8 651 aaKnown RBP16.63■□□□□ 0.25
CCHCR1-210ENST00000464012 SLC15A3Q8IY34 581 aa16.63■□□□□ 0.25
CCHCR1-210ENST00000464012 MCHR2Q969V1 340 aa16.63■□□□□ 0.25
CCHCR1-210ENST00000464012 FOXN4Q96NZ1 517 aa16.63■□□□□ 0.25
CCHCR1-210ENST00000464012 DOK1Q99704 481 aa16.63■□□□□ 0.25
CCHCR1-210ENST00000464012 SYT3Q9BQG1 590 aa16.63■□□□□ 0.25
CCHCR1-210ENST00000464012 MRPL37Q9BZE1 423 aaKnown RBP16.63■□□□□ 0.25
CCHCR1-210ENST00000464012 DENND2DQ9H6A0 471 aaPredicted RBP16.63■□□□□ 0.25
CCHCR1-210ENST00000464012 FZR1Q9UM11 496 aa16.63■□□□□ 0.25
CCHCR1-210ENST00000464012 A4GNTQ9UNA3 340 aa16.63■□□□□ 0.25
CCHCR1-210ENST00000464012 VWC2LB2RUY7 222 aa16.62■□□□□ 0.25
CCHCR1-210ENST00000464012 J3KTA2 159 aa16.62■□□□□ 0.25
CCHCR1-210ENST00000464012 NDUFS8O00217 210 aa16.62■□□□□ 0.25
CCHCR1-210ENST00000464012 CXCR6O00574 342 aa16.62■□□□□ 0.25
CCHCR1-210ENST00000464012 NME4O00746 187 aa16.62■□□□□ 0.25
CCHCR1-210ENST00000464012 ENTPD5O75356 428 aa16.62■□□□□ 0.25
CCHCR1-210ENST00000464012 IFNW1P05000 195 aa16.62■□□□□ 0.25
CCHCR1-210ENST00000464012 ADRA2AP08913 450 aa16.62■□□□□ 0.25
CCHCR1-210ENST00000464012 IGHV4-31P0DP07 118 aa16.62■□□□□ 0.25
CCHCR1-210ENST00000464012 ACADSP16219 412 aa16.62■□□□□ 0.25
CCHCR1-210ENST00000464012 FUT4P22083 530 aa16.62■□□□□ 0.25
CCHCR1-210ENST00000464012 LSP1P33241 339 aa16.62■□□□□ 0.25
CCHCR1-210ENST00000464012 NUDT2P50583 147 aa16.62■□□□□ 0.25
CCHCR1-210ENST00000464012 LAPTM4AQ15012 233 aa16.62■□□□□ 0.25
CCHCR1-210ENST00000464012 IQCCQ4KMZ1 466 aa16.62■□□□□ 0.25
CCHCR1-210ENST00000464012 TMEM53Q6P2H8 277 aa16.62■□□□□ 0.25
CCHCR1-210ENST00000464012 SLC16A14Q7RTX9 510 aa16.62■□□□□ 0.25
CCHCR1-210ENST00000464012 HDDC2Q7Z4H3 204 aa16.62■□□□□ 0.25
CCHCR1-210ENST00000464012 TREML1Q86YW5 311 aa16.62■□□□□ 0.25
CCHCR1-210ENST00000464012 ZNF584Q8IVC4 421 aa16.62■□□□□ 0.25
CCHCR1-210ENST00000464012 MRPL24Q96A35 216 aaKnown RBP16.62■□□□□ 0.25
CCHCR1-210ENST00000464012 BPESC1Q9GZL8 116 aa16.62■□□□□ 0.25
CCHCR1-210ENST00000464012 MYOZ1Q9NP98 299 aaPredicted RBP16.62■□□□□ 0.25
CCHCR1-210ENST00000464012 FBXO9Q9UK97 447 aaPredicted RBP16.62■□□□□ 0.25
CCHCR1-210ENST00000464012 FBXL3Q9UKT7 428 aa16.62■□□□□ 0.25
CCHCR1-210ENST00000464012 AP3M1Q9Y2T2 418 aa16.62■□□□□ 0.25
CCHCR1-210ENST00000464012 SNX13Q9Y5W8 968 aa16.62■□□□□ 0.25
CCHCR1-210ENST00000464012 LOC390937A0A1W2PQ73 354 aa16.61■□□□□ 0.25
CCHCR1-210ENST00000464012 SLC2A10O95528 541 aa16.61■□□□□ 0.25
CCHCR1-210ENST00000464012 IGF2P01344 180 aa16.61■□□□□ 0.25
CCHCR1-210ENST00000464012 CCL2P13500 99 aa16.61■□□□□ 0.25
CCHCR1-210ENST00000464012 DAOP14920 347 aa16.61■□□□□ 0.25
CCHCR1-210ENST00000464012 CD47Q08722 323 aa16.61■□□□□ 0.25
CCHCR1-210ENST00000464012 CYB5R2Q6BCY4 276 aa16.61■□□□□ 0.25
CCHCR1-210ENST00000464012 IGFN1Q86VF2 1251 aa16.61■□□□□ 0.25
CCHCR1-210ENST00000464012 HIPK1Q86Z02 1210 aa16.61■□□□□ 0.25
CCHCR1-210ENST00000464012 LRRC18Q8N456 261 aa16.61■□□□□ 0.25
CCHCR1-210ENST00000464012 BPIFA2Q96DR5 249 aa16.61■□□□□ 0.25
CCHCR1-210ENST00000464012 KCNK17Q96T54 332 aa16.61■□□□□ 0.25
CCHCR1-210ENST00000464012 ELAC2Q9BQ52 826 aaKnown RBP16.61■□□□□ 0.25
CCHCR1-210ENST00000464012 FNDC11Q9BVV2 318 aa16.61■□□□□ 0.25
CCHCR1-210ENST00000464012 MRPL13Q9BYD1 178 aaKnown RBP16.61■□□□□ 0.25
CCHCR1-210ENST00000464012 FAM107BQ9H098 131 aa16.61■□□□□ 0.25
CCHCR1-210ENST00000464012 OR51B6Q9H340 312 aa16.61■□□□□ 0.25
CCHCR1-210ENST00000464012 JMJD1CQ15652 2540 aa16.6■□□□□ 0.25
CCHCR1-210ENST00000464012 MALRD1Q5VYJ5 2156 aa16.6■□□□□ 0.25
CCHCR1-210ENST00000464012 IGHV4-61A0A0C4DH41 118 aa16.6■□□□□ 0.25
CCHCR1-210ENST00000464012 SERPINA1P01009 418 aa16.6■□□□□ 0.25
CCHCR1-210ENST00000464012 SERPINA5P05154 406 aa16.6■□□□□ 0.25
CCHCR1-210ENST00000464012 IGFBP1P08833 259 aaPredicted RBP16.6■□□□□ 0.25
CCHCR1-210ENST00000464012 SAGP10523 405 aaPredicted RBP16.6■□□□□ 0.25
CCHCR1-210ENST00000464012 APEHP13798 732 aaKnown RBP16.6■□□□□ 0.25
CCHCR1-210ENST00000464012 GLRXP35754 106 aa16.6■□□□□ 0.25
CCHCR1-210ENST00000464012 GSK3BP49841 420 aa16.6■□□□□ 0.25
CCHCR1-210ENST00000464012 RPS23P62266 143 aaKnown RBP16.6■□□□□ 0.25
CCHCR1-210ENST00000464012 FMODQ06828 376 aa16.6■□□□□ 0.25
CCHCR1-210ENST00000464012 MAD2L1BPQ15013 274 aaPredicted RBP16.6■□□□□ 0.25
CCHCR1-210ENST00000464012 HIST3H3Q16695 136 aa16.6■□□□□ 0.25
CCHCR1-210ENST00000464012 CHRFAM7AQ494W8 412 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms