RNA–Protein interactions for RNA: ENST00000463477.5

PTPRD-207, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 1,697 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-207ENST00000463477 RAB3BP20337 219 aa8.94□□□□□ -0.98
PTPRD-207ENST00000463477 UQCRC1P31930 480 aa8.94□□□□□ -0.98
PTPRD-207ENST00000463477 RPL4P36578 427 aaKnown RBP8.94□□□□□ -0.98
PTPRD-207ENST00000463477 GDI2P50395 445 aaKnown RBP8.94□□□□□ -0.98
PTPRD-207ENST00000463477 HSPB2Q16082 182 aa8.94□□□□□ -0.98
PTPRD-207ENST00000463477 NDUFA5Q16718 116 aa8.94□□□□□ -0.98
PTPRD-207ENST00000463477 NDUFAF6Q330K2 333 aa8.94□□□□□ -0.98
PTPRD-207ENST00000463477 LINC01590Q5TEZ4 76 aa8.94□□□□□ -0.98
PTPRD-207ENST00000463477 SLC6A19Q695T7 634 aa8.94□□□□□ -0.98
PTPRD-207ENST00000463477 TIGD3Q6B0B8 471 aa8.94□□□□□ -0.98
PTPRD-207ENST00000463477 PYHIN1Q6K0P9 492 aa8.94□□□□□ -0.98
PTPRD-207ENST00000463477 JMJD6Q6NYC1 403 aaPredicted RBP8.94□□□□□ -0.98
PTPRD-207ENST00000463477 IGFL2Q6UWQ7 119 aa8.94□□□□□ -0.98
PTPRD-207ENST00000463477 LANCL3Q6ZV70 420 aa8.94□□□□□ -0.98
PTPRD-207ENST00000463477 PSMF1Q92530 271 aa8.94□□□□□ -0.98
PTPRD-207ENST00000463477 ZMYND19Q96E35 227 aaPredicted RBP8.94□□□□□ -0.98
PTPRD-207ENST00000463477 ARSGQ96EG1 525 aa8.94□□□□□ -0.98
PTPRD-207ENST00000463477 THOC3Q96J01 351 aaKnown RBP8.94□□□□□ -0.98
PTPRD-207ENST00000463477 LMF1Q96S06 567 aa8.94□□□□□ -0.98
PTPRD-207ENST00000463477 WDR77Q9BQA1 342 aaPredicted RBP8.94□□□□□ -0.98
PTPRD-207ENST00000463477 ADAM19Q9H013 955 aa8.94□□□□□ -0.98
PTPRD-207ENST00000463477 MMP25Q9NPA2 562 aa8.94□□□□□ -0.98
PTPRD-207ENST00000463477 OR6C68A6NDL8 312 aa8.93□□□□□ -0.98
PTPRD-207ENST00000463477 OR6C76A6NM76 312 aa8.93□□□□□ -0.98
PTPRD-207ENST00000463477 HAX1O00165 279 aa8.93□□□□□ -0.98
PTPRD-207ENST00000463477 EIF4E2O60573 245 aaKnown RBP8.93□□□□□ -0.98
PTPRD-207ENST00000463477 HPGDP15428 266 aa8.93□□□□□ -0.98
PTPRD-207ENST00000463477 SDHAP31040 664 aa8.93□□□□□ -0.98
PTPRD-207ENST00000463477 CASRP41180 1078 aa8.93□□□□□ -0.98
PTPRD-207ENST00000463477 PITPNBP48739 271 aa8.93□□□□□ -0.98
PTPRD-207ENST00000463477 RPS11P62280 158 aaKnown RBP eCLIP8.93□□□□□ -0.98
PTPRD-207ENST00000463477 BTG1P62324 171 aa8.93□□□□□ -0.98
PTPRD-207ENST00000463477 CD226Q15762 336 aa8.93□□□□□ -0.98
PTPRD-207ENST00000463477 NNATQ16517 81 aa8.93□□□□□ -0.98
PTPRD-207ENST00000463477 TP53I3Q53FA7 332 aa8.93□□□□□ -0.98
PTPRD-207ENST00000463477 ZNF684Q5T5D7 378 aa8.93□□□□□ -0.98
PTPRD-207ENST00000463477 GPR139Q6DWJ6 353 aa8.93□□□□□ -0.98
PTPRD-207ENST00000463477 LIX1LQ8IVB5 337 aa8.93□□□□□ -0.98
PTPRD-207ENST00000463477 LRRC17Q8N6Y2 441 aa8.93□□□□□ -0.98
PTPRD-207ENST00000463477 M1APQ8TC57 530 aa8.93□□□□□ -0.98
PTPRD-207ENST00000463477 ZNF721Q8TF20 911 aa8.93□□□□□ -0.98
PTPRD-207ENST00000463477 SNX33Q8WV41 574 aa8.93□□□□□ -0.98
PTPRD-207ENST00000463477 TRIM63Q969Q1 353 aa8.93□□□□□ -0.98
PTPRD-207ENST00000463477 CREB3L1Q96BA8 519 aa8.93□□□□□ -0.98
PTPRD-207ENST00000463477 LPAR4Q99677 370 aa8.93□□□□□ -0.98
PTPRD-207ENST00000463477 MRI1Q9BV20 369 aa8.93□□□□□ -0.98
PTPRD-207ENST00000463477 HELZ2Q9BYK8 2649 aaKnown RBP8.93□□□□□ -0.98
PTPRD-207ENST00000463477 NXF5Q9H1B4 397 aaKnown RBP8.93□□□□□ -0.98
PTPRD-207ENST00000463477 MMP28Q9H239 520 aa8.93□□□□□ -0.98
PTPRD-207ENST00000463477 FKRPQ9H9S5 495 aa8.93□□□□□ -0.98
PTPRD-207ENST00000463477 NANSQ9NR45 359 aa8.93□□□□□ -0.98
PTPRD-207ENST00000463477 RASD1Q9Y272 281 aa8.93□□□□□ -0.98
PTPRD-207ENST00000463477 ADAM18Q9Y3Q7 739 aa8.93□□□□□ -0.98
PTPRD-207ENST00000463477 N6AMT1Q9Y5N5 214 aa8.93□□□□□ -0.98
PTPRD-207ENST00000463477 A0A0B4J293 547 aa8.92□□□□□ -0.98
PTPRD-207ENST00000463477 IGHV3-20A0A0C4DH32 117 aa8.92□□□□□ -0.98
PTPRD-207ENST00000463477 FAM240BA0A1B0GVZ2 78 aa8.92□□□□□ -0.98
PTPRD-207ENST00000463477 FAM172BPA6NC97 362 aa8.92□□□□□ -0.98
PTPRD-207ENST00000463477 ZNF879B4DU55 563 aa8.92□□□□□ -0.98
PTPRD-207ENST00000463477 ALG1L2C9J202 215 aa8.92□□□□□ -0.98
PTPRD-207ENST00000463477 CDC40O60508 579 aaKnown RBP eCLIP8.92□□□□□ -0.98
PTPRD-207ENST00000463477 TSPAN2O60636 221 aa8.92□□□□□ -0.98
PTPRD-207ENST00000463477 MST1P26927 711 aa8.92□□□□□ -0.98
PTPRD-207ENST00000463477 ACVR1BP36896 505 aa8.92□□□□□ -0.98
PTPRD-207ENST00000463477 INPP1P49441 399 aa8.92□□□□□ -0.98
PTPRD-207ENST00000463477 EGR4Q05215 589 aa8.92□□□□□ -0.98
PTPRD-207ENST00000463477 EBPQ15125 230 aaKnown RBP8.92□□□□□ -0.98
PTPRD-207ENST00000463477 EXT1Q16394 746 aa8.92□□□□□ -0.98
PTPRD-207ENST00000463477 TBRG1Q3YBR2 411 aa8.92□□□□□ -0.98
PTPRD-207ENST00000463477 CEP78Q5JTW2 689 aa8.92□□□□□ -0.98
PTPRD-207ENST00000463477 SLC16A9Q7RTY1 509 aa8.92□□□□□ -0.98
PTPRD-207ENST00000463477 TCTE3Q8IZS6 198 aa8.92□□□□□ -0.98
PTPRD-207ENST00000463477 ZADH2Q8N4Q0 377 aa8.92□□□□□ -0.98
PTPRD-207ENST00000463477 RBMXL3Q8N7X1 1067 aaKnown RBP8.92□□□□□ -0.98
PTPRD-207ENST00000463477 SAMD12Q8N8I0 201 aa8.92□□□□□ -0.98
PTPRD-207ENST00000463477 OR4M1Q8NGD0 313 aa8.92□□□□□ -0.98
PTPRD-207ENST00000463477 TRMT10AQ8TBZ6 339 aaKnown RBP8.92□□□□□ -0.98
PTPRD-207ENST00000463477 PHOSPHO1Q8TCT1 267 aa8.92□□□□□ -0.98
PTPRD-207ENST00000463477 DAZLQ92904 295 aaKnown RBP8.92□□□□□ -0.98
PTPRD-207ENST00000463477 TSLPQ969D9 159 aa8.92□□□□□ -0.98
PTPRD-207ENST00000463477 RFT1Q96AA3 541 aa8.92□□□□□ -0.98
PTPRD-207ENST00000463477 NMNAT3Q96T66 252 aa8.92□□□□□ -0.98
PTPRD-207ENST00000463477 WACQ9BTA9 647 aa8.92□□□□□ -0.98
PTPRD-207ENST00000463477 CLCA3PQ9Y6N3 262 aa8.92□□□□□ -0.98
PTPRD-207ENST00000463477 NBASA2RRP1 2371 aa8.92□□□□□ -0.98
PTPRD-207ENST00000463477 RP1L1Q8IWN7 2480 aaPredicted RBP8.92□□□□□ -0.98
PTPRD-207ENST00000463477 PCNX3Q9H6A9 2034 aa8.91□□□□□ -0.98
PTPRD-207ENST00000463477 A0A0G2JMP0 313 aa8.91□□□□□ -0.98
PTPRD-207ENST00000463477 TRBV2A0A0J9YWF9 115 aa8.91□□□□□ -0.98
PTPRD-207ENST00000463477 A0A0X1KG70 313 aa8.91□□□□□ -0.98
PTPRD-207ENST00000463477 CENPXA8MT69 81 aa8.91□□□□□ -0.98
PTPRD-207ENST00000463477 GNB5O14775 395 aa8.91□□□□□ -0.98
PTPRD-207ENST00000463477 TFECO14948 347 aaPredicted RBP8.91□□□□□ -0.98
PTPRD-207ENST00000463477 CTDSPLO15194 276 aa8.91□□□□□ -0.98
PTPRD-207ENST00000463477 OIP5O43482 229 aa8.91□□□□□ -0.98
PTPRD-207ENST00000463477 ORC5O43913 435 aa8.91□□□□□ -0.98
PTPRD-207ENST00000463477 UBL3O95164 117 aa8.91□□□□□ -0.98
PTPRD-207ENST00000463477 EIF4EP06730 217 aaKnown RBP8.91□□□□□ -0.98
PTPRD-207ENST00000463477 TACSTD2P09758 323 aa8.91□□□□□ -0.98
PTPRD-207ENST00000463477 EPXP11678 715 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms