RNA–Protein interactions for RNA: ENST00000463007.5

HDAC4-208, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 3,158 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-208ENST00000463007 NDUFB6O95139 128 aa11.3□□□□□ -0.6
HDAC4-208ENST00000463007 CSTAP01040 98 aa11.3□□□□□ -0.6
HDAC4-208ENST00000463007 IGKV1D-16P01601 117 aa11.3□□□□□ -0.6
HDAC4-208ENST00000463007 CTXN1P60606 82 aa11.3□□□□□ -0.6
HDAC4-208ENST00000463007 MAT1AQ00266 395 aaKnown RBP11.3□□□□□ -0.6
HDAC4-208ENST00000463007 MGAT2Q10469 447 aa11.3□□□□□ -0.6
HDAC4-208ENST00000463007 RHOUQ7L0Q8 258 aa11.3□□□□□ -0.6
HDAC4-208ENST00000463007 KCTD9Q7L273 389 aa11.3□□□□□ -0.6
HDAC4-208ENST00000463007 BEST3Q8N1M1 668 aa11.3□□□□□ -0.6
HDAC4-208ENST00000463007 CDRT4Q8N9R6 151 aa11.3□□□□□ -0.6
HDAC4-208ENST00000463007 OR4S1Q8NGB4 309 aa11.3□□□□□ -0.6
HDAC4-208ENST00000463007 OR9A4Q8NGU2 314 aa11.3□□□□□ -0.6
HDAC4-208ENST00000463007 C2CD4CQ8TF44 421 aa11.3□□□□□ -0.6
HDAC4-208ENST00000463007 CPNE2Q96FN4 548 aaPredicted RBP11.3□□□□□ -0.6
HDAC4-208ENST00000463007 CCDC3Q9BQI4 270 aa11.3□□□□□ -0.6
HDAC4-208ENST00000463007 LYRM4Q9HD34 91 aa11.3□□□□□ -0.6
HDAC4-208ENST00000463007 CPNE7Q9UBL6 633 aa11.3□□□□□ -0.6
HDAC4-208ENST00000463007 LAMP5Q9UJQ1 280 aa11.3□□□□□ -0.6
HDAC4-208ENST00000463007 SLC22A13Q9Y226 551 aa11.3□□□□□ -0.6
HDAC4-208ENST00000463007 NOP16Q9Y3C1 178 aaKnown RBP11.3□□□□□ -0.6
HDAC4-208ENST00000463007 D6RAR5 112 aa11.29□□□□□ -0.6
HDAC4-208ENST00000463007 H0YGG7 62 aa11.29□□□□□ -0.6
HDAC4-208ENST00000463007 CYR61O00622 381 aa11.29□□□□□ -0.6
HDAC4-208ENST00000463007 GAAP10253 952 aa11.29□□□□□ -0.6
HDAC4-208ENST00000463007 POU3F4P49335 361 aa11.29□□□□□ -0.6
HDAC4-208ENST00000463007 ARF3P61204 181 aaPredicted RBP11.29□□□□□ -0.6
HDAC4-208ENST00000463007 MRPS21P82921 87 aaKnown RBP11.29□□□□□ -0.6
HDAC4-208ENST00000463007 COL19A1Q14993 1142 aa11.29□□□□□ -0.6
HDAC4-208ENST00000463007 CSRP2Q16527 193 aa11.29□□□□□ -0.6
HDAC4-208ENST00000463007 DND1Q8IYX4 353 aaKnown RBP11.29□□□□□ -0.6
HDAC4-208ENST00000463007 ZFP82Q8N141 532 aa11.29□□□□□ -0.6
HDAC4-208ENST00000463007 GPBAR1Q8TDU6 330 aa11.29□□□□□ -0.6
HDAC4-208ENST00000463007 RERGQ96A58 199 aaPredicted RBP11.29□□□□□ -0.6
HDAC4-208ENST00000463007 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.29□□□□□ -0.6
HDAC4-208ENST00000463007 SLC39A1Q9NY26 324 aa11.29□□□□□ -0.6
HDAC4-208ENST00000463007 CGGBP1Q9UFW8 167 aaPredicted RBP11.29□□□□□ -0.6
HDAC4-208ENST00000463007 C19orf53Q9UNZ5 99 aaPredicted RBP11.29□□□□□ -0.6
HDAC4-208ENST00000463007 NPTNQ9Y639 398 aa11.29□□□□□ -0.6
HDAC4-208ENST00000463007 TMEM272A0A1B0GTI8 110 aa11.29□□□□□ -0.6
HDAC4-208ENST00000463007 KRBOX1C9JBD0 128 aa11.29□□□□□ -0.6
HDAC4-208ENST00000463007 GPR31O00270 319 aa11.29□□□□□ -0.6
HDAC4-208ENST00000463007 GSTZ1O43708 216 aaPredicted RBP11.29□□□□□ -0.6
HDAC4-208ENST00000463007 NUDT14O95848 222 aa11.29□□□□□ -0.6
HDAC4-208ENST00000463007 AMY2AP04746 511 aa11.29□□□□□ -0.6
HDAC4-208ENST00000463007 MNDAP41218 407 aa11.29□□□□□ -0.6
HDAC4-208ENST00000463007 DIO1P49895 249 aa11.29□□□□□ -0.6
HDAC4-208ENST00000463007 YPEL5P62699 121 aa11.29□□□□□ -0.6
HDAC4-208ENST00000463007 RBMS2Q15434 407 aaKnown RBP11.29□□□□□ -0.6
HDAC4-208ENST00000463007 OR7A5Q15622 319 aa11.29□□□□□ -0.6
HDAC4-208ENST00000463007 NPEPL1Q8NDH3 523 aa11.29□□□□□ -0.6
HDAC4-208ENST00000463007 C3orf49Q96BT1 292 aa11.29□□□□□ -0.6
HDAC4-208ENST00000463007 SLC25A36Q96CQ1 311 aa11.29□□□□□ -0.6
HDAC4-208ENST00000463007 MOGAT1Q96PD6 335 aa11.29□□□□□ -0.6
HDAC4-208ENST00000463007 TINAGL1Q9GZM7 467 aaPredicted RBP11.29□□□□□ -0.6
HDAC4-208ENST00000463007 WDR13Q9H1Z4 485 aa11.29□□□□□ -0.6
HDAC4-208ENST00000463007 ACTR10Q9NZ32 417 aa11.29□□□□□ -0.6
HDAC4-208ENST00000463007 CHRNA9Q9UGM1 479 aa11.29□□□□□ -0.6
HDAC4-208ENST00000463007 PCNX3Q9H6A9 2034 aa11.28□□□□□ -0.6
HDAC4-208ENST00000463007 AGR2O95994 175 aa11.28□□□□□ -0.6
HDAC4-208ENST00000463007 IGLV3-19P01714 112 aa11.28□□□□□ -0.6
HDAC4-208ENST00000463007 HPGDP15428 266 aa11.28□□□□□ -0.6
HDAC4-208ENST00000463007 VAMP1P23763 118 aa11.28□□□□□ -0.6
HDAC4-208ENST00000463007 RAG2P55895 527 aa11.28□□□□□ -0.6
HDAC4-208ENST00000463007 RPL13AP3Q6NVV1 102 aa11.28□□□□□ -0.6
HDAC4-208ENST00000463007 FIGLAQ6QHK4 219 aa11.28□□□□□ -0.6
HDAC4-208ENST00000463007 BAHD1Q8TBE0 780 aaPredicted RBP11.28□□□□□ -0.6
HDAC4-208ENST00000463007 FAM3CQ92520 227 aa11.28□□□□□ -0.6
HDAC4-208ENST00000463007 FAM46BQ96A09 425 aa11.28□□□□□ -0.6
HDAC4-208ENST00000463007 HAVCR1Q96D42 359 aa11.28□□□□□ -0.6
HDAC4-208ENST00000463007 MRPS24Q96EL2 167 aaKnown RBP11.28□□□□□ -0.6
HDAC4-208ENST00000463007 RBM18Q96H35 190 aaKnown RBP11.28□□□□□ -0.6
HDAC4-208ENST00000463007 SYT4Q9H2B2 425 aa11.28□□□□□ -0.6
HDAC4-208ENST00000463007 C14orf105Q9NVL8 296 aa11.28□□□□□ -0.6
HDAC4-208ENST00000463007 A0A087WV62 115 aa11.28□□□□□ -0.6
HDAC4-208ENST00000463007 OR2M5A3KFT3 312 aa11.28□□□□□ -0.6
HDAC4-208ENST00000463007 EEF1E1-BLOC1S5C9J1V9 151 aa11.28□□□□□ -0.6
HDAC4-208ENST00000463007 IGHV4-34P06331 123 aa11.28□□□□□ -0.6
HDAC4-208ENST00000463007 THBS1P07996 1170 aa11.28□□□□□ -0.6
HDAC4-208ENST00000463007 GABRG2P18507 467 aa11.28□□□□□ -0.6
HDAC4-208ENST00000463007 DRD1P21728 446 aa11.28□□□□□ -0.6
HDAC4-208ENST00000463007 POU4F2Q12837 409 aa11.28□□□□□ -0.6
HDAC4-208ENST00000463007 PRR22Q8IZ63 422 aa11.28□□□□□ -0.6
HDAC4-208ENST00000463007 FAM71CQ8NEG0 241 aa11.28□□□□□ -0.6
HDAC4-208ENST00000463007 BPIFCQ8NFQ6 507 aa11.28□□□□□ -0.6
HDAC4-208ENST00000463007 CTHRC1Q96CG8 243 aa11.28□□□□□ -0.6
HDAC4-208ENST00000463007 AMELYQ99218 206 aa11.28□□□□□ -0.6
HDAC4-208ENST00000463007 JAM3Q9BX67 310 aa11.28□□□□□ -0.6
HDAC4-208ENST00000463007 ASF1BQ9NVP2 202 aa11.28□□□□□ -0.6
HDAC4-208ENST00000463007 HPF1Q9NWY4 346 aa11.28□□□□□ -0.6
HDAC4-208ENST00000463007 MLXQ9UH92 298 aa11.28□□□□□ -0.6
HDAC4-208ENST00000463007 C13orf42A0A1B0GVH6 325 aa11.28□□□□□ -0.6
HDAC4-208ENST00000463007 FAM221BA6H8Z2 402 aa11.28□□□□□ -0.6
HDAC4-208ENST00000463007 SOX1O00570 391 aaPredicted RBP11.28□□□□□ -0.6
HDAC4-208ENST00000463007 BRINP1O60477 761 aa11.28□□□□□ -0.6
HDAC4-208ENST00000463007 ACAA2P42765 397 aaKnown RBP11.28□□□□□ -0.6
HDAC4-208ENST00000463007 SKP1P63208 163 aa11.28□□□□□ -0.6
HDAC4-208ENST00000463007 Q499Y3 187 aa11.28□□□□□ -0.6
HDAC4-208ENST00000463007 MDGA2Q7Z553 956 aa11.28□□□□□ -0.6
HDAC4-208ENST00000463007 CMIPQ8IY22 773 aa11.28□□□□□ -0.6
HDAC4-208ENST00000463007 SAMD14Q8IZD0 417 aaPredicted RBP11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms