RNA–Protein interactions for RNA: ENST00000461553.1

USP4-206, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 4

Gene USP4, Length 544 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-206ENST00000461553 ZNF583Q96ND8 569 aa12.05□□□□□ -0.48
USP4-206ENST00000461553 BPESC1Q9GZL8 116 aa12.05□□□□□ -0.48
USP4-206ENST00000461553 STX18Q9P2W9 335 aaKnown RBP12.05□□□□□ -0.48
USP4-206ENST00000461553 SLC7A8Q9UHI5 535 aa12.05□□□□□ -0.48
USP4-206ENST00000461553 CDC42EP3Q9UKI2 254 aa12.05□□□□□ -0.48
USP4-206ENST00000461553 MED31Q9Y3C7 131 aa12.05□□□□□ -0.48
USP4-206ENST00000461553 ELOVL7A1L3X0 281 aa12.04□□□□□ -0.48
USP4-206ENST00000461553 SH3PXD2BA1X283 911 aa12.04□□□□□ -0.48
USP4-206ENST00000461553 M0R233 179 aa12.04□□□□□ -0.48
USP4-206ENST00000461553 DHHO43323 396 aa12.04□□□□□ -0.48
USP4-206ENST00000461553 F13BP05160 661 aa12.04□□□□□ -0.48
USP4-206ENST00000461553 THRBP10828 461 aa12.04□□□□□ -0.48
USP4-206ENST00000461553 OR1E2P47887 323 aa12.04□□□□□ -0.48
USP4-206ENST00000461553 ZNF84P51523 738 aa12.04□□□□□ -0.48
USP4-206ENST00000461553 PIN1Q13526 163 aaPredicted RBP12.04□□□□□ -0.48
USP4-206ENST00000461553 RAB39AQ14964 217 aa12.04□□□□□ -0.48
USP4-206ENST00000461553 TMEM53Q6P2H8 277 aa12.04□□□□□ -0.48
USP4-206ENST00000461553 PODNL1Q6PEZ8 512 aa12.04□□□□□ -0.48
USP4-206ENST00000461553 DPPA2Q7Z7J5 298 aa12.04□□□□□ -0.48
USP4-206ENST00000461553 MICU2Q8IYU8 434 aa12.04□□□□□ -0.48
USP4-206ENST00000461553 SLC22A24Q8N4F4 322 aa12.04□□□□□ -0.48
USP4-206ENST00000461553 POU5F2Q8N7G0 328 aa12.04□□□□□ -0.48
USP4-206ENST00000461553 ASB10Q8WXI3 467 aa12.04□□□□□ -0.48
USP4-206ENST00000461553 PRRC1Q96M27 445 aa12.04□□□□□ -0.48
USP4-206ENST00000461553 ZNF75AQ96N20 296 aa12.04□□□□□ -0.48
USP4-206ENST00000461553 KCNK17Q96T54 332 aa12.04□□□□□ -0.48
USP4-206ENST00000461553 DOK1Q99704 481 aa12.04□□□□□ -0.48
USP4-206ENST00000461553 TPK1Q9H3S4 243 aa12.04□□□□□ -0.48
USP4-206ENST00000461553 C1orf198Q9H425 327 aa12.04□□□□□ -0.48
USP4-206ENST00000461553 CCDC134Q9H6E4 229 aa12.04□□□□□ -0.48
USP4-206ENST00000461553 INIPQ9NRY2 104 aa12.04□□□□□ -0.48
USP4-206ENST00000461553 ZNF446Q9NWS9 450 aa12.04□□□□□ -0.48
USP4-206ENST00000461553 TMEM160Q9NX00 188 aa12.04□□□□□ -0.48
USP4-206ENST00000461553 ARMCX1Q9P291 453 aa12.04□□□□□ -0.48
USP4-206ENST00000461553 LPAR3Q9UBY5 353 aa12.04□□□□□ -0.48
USP4-206ENST00000461553 RIMS3Q9UJD0 308 aa12.04□□□□□ -0.48
USP4-206ENST00000461553 KCNS2Q9ULS6 477 aa12.04□□□□□ -0.48
USP4-206ENST00000461553 AP3M1Q9Y2T2 418 aa12.04□□□□□ -0.48
USP4-206ENST00000461553 CENPBD1B2RD01 187 aa12.03□□□□□ -0.48
USP4-206ENST00000461553 QDPRP09417 244 aa12.03□□□□□ -0.48
USP4-206ENST00000461553 NR2C1P13056 603 aa12.03□□□□□ -0.48
USP4-206ENST00000461553 ZNF35P13682 527 aa12.03□□□□□ -0.48
USP4-206ENST00000461553 DAOP14920 347 aa12.03□□□□□ -0.48
USP4-206ENST00000461553 FUT1P19526 365 aa12.03□□□□□ -0.48
USP4-206ENST00000461553 KDELR2P33947 212 aa12.03□□□□□ -0.48
USP4-206ENST00000461553 GLRXP35754 106 aa12.03□□□□□ -0.48
USP4-206ENST00000461553 ST3GAL3Q11203 375 aa12.03□□□□□ -0.48
USP4-206ENST00000461553 SLC36A2Q495M3 483 aa12.03□□□□□ -0.48
USP4-206ENST00000461553 NRN1LQ496H8 165 aa12.03□□□□□ -0.48
USP4-206ENST00000461553 FAM166AQ6J272 317 aa12.03□□□□□ -0.48
USP4-206ENST00000461553 SLC16A14Q7RTX9 510 aa12.03□□□□□ -0.48
USP4-206ENST00000461553 SKA3Q8IX90 412 aa12.03□□□□□ -0.48
USP4-206ENST00000461553 RP9Q8TA86 221 aaKnown RBP12.03□□□□□ -0.48
USP4-206ENST00000461553 FOXN4Q96NZ1 517 aa12.03□□□□□ -0.48
USP4-206ENST00000461553 ZNF347Q96SE7 839 aa12.03□□□□□ -0.48
USP4-206ENST00000461553 SH3GL3Q99963 347 aa12.03□□□□□ -0.48
USP4-206ENST00000461553 MRPL37Q9BZE1 423 aaKnown RBP12.03□□□□□ -0.48
USP4-206ENST00000461553 RNF121Q9H920 327 aa12.03□□□□□ -0.48
USP4-206ENST00000461553 MED4Q9NPJ6 270 aa12.03□□□□□ -0.48
USP4-206ENST00000461553 C20orf141Q9NUB4 165 aa12.03□□□□□ -0.48
USP4-206ENST00000461553 SVEP1Q4LDE5 3571 aa12.03□□□□□ -0.48
USP4-206ENST00000461553 IGHV4-61A0A0C4DH41 118 aa12.02□□□□□ -0.49
USP4-206ENST00000461553 A0A1W2PPW3 197 aa12.02□□□□□ -0.49
USP4-206ENST00000461553 TMEM129A0AVI4 362 aa12.02□□□□□ -0.49
USP4-206ENST00000461553 GMNCA6NCL1 334 aa12.02□□□□□ -0.49
USP4-206ENST00000461553 SYNGR3O43761 229 aa12.02□□□□□ -0.49
USP4-206ENST00000461553 PIP5K1CO60331 668 aa12.02□□□□□ -0.49
USP4-206ENST00000461553 STAMBPO95630 424 aa12.02□□□□□ -0.49
USP4-206ENST00000461553 SERPINA5P05154 406 aa12.02□□□□□ -0.49
USP4-206ENST00000461553 ADRA2AP08913 450 aa12.02□□□□□ -0.49
USP4-206ENST00000461553 PATE4P0C8F1 98 aa12.02□□□□□ -0.49
USP4-206ENST00000461553 FAM157CP0CG43 387 aa12.02□□□□□ -0.49
USP4-206ENST00000461553 ACADSP16219 412 aa12.02□□□□□ -0.49
USP4-206ENST00000461553 ZNF23P17027 643 aa12.02□□□□□ -0.49
USP4-206ENST00000461553 AQP2P41181 271 aa12.02□□□□□ -0.49
USP4-206ENST00000461553 EVX1P49640 407 aa12.02□□□□□ -0.49
USP4-206ENST00000461553 MYBPC1Q00872 1141 aa12.02□□□□□ -0.49
USP4-206ENST00000461553 LRFN4Q6PJG9 635 aa12.02□□□□□ -0.49
USP4-206ENST00000461553 CXXC5Q7LFL8 322 aaKnown RBP12.02□□□□□ -0.49
USP4-206ENST00000461553 ZNF584Q8IVC4 421 aa12.02□□□□□ -0.49
USP4-206ENST00000461553 SLC30A7Q8NEW0 376 aa12.02□□□□□ -0.49
USP4-206ENST00000461553 OR4K5Q8NGD3 323 aa12.02□□□□□ -0.49
USP4-206ENST00000461553 MCHR2Q969V1 340 aa12.02□□□□□ -0.49
USP4-206ENST00000461553 MDFIQ99750 246 aa12.02□□□□□ -0.49
USP4-206ENST00000461553 SYT3Q9BQG1 590 aa12.02□□□□□ -0.49
USP4-206ENST00000461553 SHARPINQ9H0F6 387 aa12.02□□□□□ -0.49
USP4-206ENST00000461553 CHODLQ9H9P2 273 aa12.02□□□□□ -0.49
USP4-206ENST00000461553 CDH20Q9HBT6 801 aa12.02□□□□□ -0.49
USP4-206ENST00000461553 LOC100289279A0A1B0GTE1 492 aa12.01□□□□□ -0.49
USP4-206ENST00000461553 SLC22A23A1A5C7 686 aa12.01□□□□□ -0.49
USP4-206ENST00000461553 NPIPB13A6NJU9 1138 aa12.01□□□□□ -0.49
USP4-206ENST00000461553 NPIPB4C9JG80 1138 aa12.01□□□□□ -0.49
USP4-206ENST00000461553 LMX1BO60663 402 aa12.01□□□□□ -0.49
USP4-206ENST00000461553 TRMUO75648 421 aaKnown RBP12.01□□□□□ -0.49
USP4-206ENST00000461553 PTHP01270 115 aa12.01□□□□□ -0.49
USP4-206ENST00000461553 IFNW1P05000 195 aa12.01□□□□□ -0.49
USP4-206ENST00000461553 GIFP27352 417 aa12.01□□□□□ -0.49
USP4-206ENST00000461553 CHN2P52757 468 aa12.01□□□□□ -0.49
USP4-206ENST00000461553 SELENOWP63302 87 aa12.01□□□□□ -0.49
USP4-206ENST00000461553 RUNX1T1Q06455 604 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms