RNA–Protein interactions for RNA: ENST00000461326.1

CLK1-206, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 435 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-206ENST00000461326 ERLIN1O75477 346 aa2.64□□□□□ -1.99
CLK1-206ENST00000461326 IGHV2-5P01817 119 aa2.64□□□□□ -1.99
CLK1-206ENST00000461326 FUT3P21217 361 aa2.64□□□□□ -1.99
CLK1-206ENST00000461326 CHMLP26374 656 aa2.64□□□□□ -1.99
CLK1-206ENST00000461326 FMO3P31513 532 aa2.64□□□□□ -1.99
CLK1-206ENST00000461326 GSSP48637 474 aa2.64□□□□□ -1.99
CLK1-206ENST00000461326 SH3BGRP55822 239 aaPredicted RBP2.64□□□□□ -1.99
CLK1-206ENST00000461326 SRSF5Q13243 272 aaKnown RBP2.64□□□□□ -1.99
CLK1-206ENST00000461326 PPIL2Q13356 520 aa2.64□□□□□ -1.99
CLK1-206ENST00000461326 CUL2Q13617 745 aa2.64□□□□□ -1.99
CLK1-206ENST00000461326 TGFBIQ15582 683 aa2.64□□□□□ -1.99
CLK1-206ENST00000461326 VPS26BQ4G0F5 336 aa2.64□□□□□ -1.99
CLK1-206ENST00000461326 XKR7Q5GH72 579 aa2.64□□□□□ -1.99
CLK1-206ENST00000461326 LCE1CQ5T751 118 aa2.64□□□□□ -1.99
CLK1-206ENST00000461326 LCE1BQ5T7P3 118 aa2.64□□□□□ -1.99
CLK1-206ENST00000461326 CARD17Q5XLA6 110 aa2.64□□□□□ -1.99
CLK1-206ENST00000461326 H2AFVQ71UI9 128 aa2.64□□□□□ -1.99
CLK1-206ENST00000461326 RNF175Q8N4F7 328 aa2.64□□□□□ -1.99
CLK1-206ENST00000461326 MCUR1Q96AQ8 359 aa2.64□□□□□ -1.99
CLK1-206ENST00000461326 SRMSQ9H3Y6 488 aa2.64□□□□□ -1.99
CLK1-206ENST00000461326 NANOGQ9H9S0 305 aa2.64□□□□□ -1.99
CLK1-206ENST00000461326 PDFQ9HBH1 243 aa2.64□□□□□ -1.99
CLK1-206ENST00000461326 RAB20Q9NX57 234 aa2.64□□□□□ -1.99
CLK1-206ENST00000461326 HOXC10Q9NYD6 342 aa2.64□□□□□ -1.99
CLK1-206ENST00000461326 PISDQ9UG56 409 aa2.64□□□□□ -1.99
CLK1-206ENST00000461326 MTRF1LQ9UGC7 380 aaKnown RBP2.64□□□□□ -1.99
CLK1-206ENST00000461326 NUFIP1Q9UHK0 495 aaKnown RBP2.64□□□□□ -1.99
CLK1-206ENST00000461326 GNPTGQ9UJJ9 305 aa2.64□□□□□ -1.99
CLK1-206ENST00000461326 MMP17Q9ULZ9 603 aa2.64□□□□□ -1.99
CLK1-206ENST00000461326 ADAMTS13Q76LX8 1427 aa2.64□□□□□ -1.99
CLK1-206ENST00000461326 SETBP1Q9Y6X0 1596 aa2.64□□□□□ -1.99
CLK1-206ENST00000461326 ALKQ9UM73 1620 aa2.64□□□□□ -1.99
CLK1-206ENST00000461326 ADAMTS9Q9P2N4 1935 aa2.64□□□□□ -1.99
CLK1-206ENST00000461326 LRRC7Q96NW7 1537 aa2.63□□□□□ -1.99
CLK1-206ENST00000461326 CROCCQ5TZA2 2017 aa2.63□□□□□ -1.99
CLK1-206ENST00000461326 NALCNQ8IZF0 1738 aa2.63□□□□□ -1.99
CLK1-206ENST00000461326 XRN1Q8IZH2 1706 aaKnown RBP2.63□□□□□ -1.99
CLK1-206ENST00000461326 SIPA1L2Q9P2F8 1722 aaPredicted RBP2.63□□□□□ -1.99
CLK1-206ENST00000461326 SPATA31E1Q6ZUB1 1445 aa2.63□□□□□ -1.99
CLK1-206ENST00000461326 A0A0B4J2A0 478 aa2.63□□□□□ -1.99
CLK1-206ENST00000461326 RBMY1BA6NDE4 496 aaKnown RBP2.63□□□□□ -1.99
CLK1-206ENST00000461326 RBMY1EA6NEQ0 496 aaKnown RBP2.63□□□□□ -1.99
CLK1-206ENST00000461326 KRTAP4-16G5E9R7 235 aaPredicted RBP2.63□□□□□ -1.99
CLK1-206ENST00000461326 NPIPB7O75200 414 aa2.63□□□□□ -1.99
CLK1-206ENST00000461326 C1orf105O95561 183 aa2.63□□□□□ -1.99
CLK1-206ENST00000461326 KRT6AP02538 564 aa2.63□□□□□ -1.99
CLK1-206ENST00000461326 RBMY1DP0C7P1 496 aaKnown RBP2.63□□□□□ -1.99
CLK1-206ENST00000461326 CHTF8P0CG12 524 aa2.63□□□□□ -1.99
CLK1-206ENST00000461326 RBMY1A1P0DJD3 496 aaKnown RBP2.63□□□□□ -1.99
CLK1-206ENST00000461326 SLC2A5P22732 501 aa2.63□□□□□ -1.99
CLK1-206ENST00000461326 OTX1P32242 354 aaPredicted RBP2.63□□□□□ -1.99
CLK1-206ENST00000461326 FOXN2P32314 431 aa2.63□□□□□ -1.99
CLK1-206ENST00000461326 CAV2P51636 162 aa2.63□□□□□ -1.99
CLK1-206ENST00000461326 ACLYP53396 1101 aa2.63□□□□□ -1.99
CLK1-206ENST00000461326 KRTAP10-1P60331 282 aa2.63□□□□□ -1.99
CLK1-206ENST00000461326 PRPS1P60891 318 aa2.63□□□□□ -1.99
CLK1-206ENST00000461326 MRPS22P82650 360 aaKnown RBP2.63□□□□□ -1.99
CLK1-206ENST00000461326 BEX3Q00994 111 aa2.63□□□□□ -1.99
CLK1-206ENST00000461326 ACVR1Q04771 509 aa2.63□□□□□ -1.99
CLK1-206ENST00000461326 HERPUD1Q15011 391 aa2.63□□□□□ -1.99
CLK1-206ENST00000461326 C1orf94Q6P1W5 598 aa2.63□□□□□ -1.99
CLK1-206ENST00000461326 C6orf89Q6UWU4 347 aa2.63□□□□□ -1.99
CLK1-206ENST00000461326 IL34Q6ZMJ4 242 aa2.63□□□□□ -1.99
CLK1-206ENST00000461326 ZNF620Q6ZNG0 422 aa2.63□□□□□ -1.99
CLK1-206ENST00000461326 RFLNAQ6ZTI6 216 aa2.63□□□□□ -1.99
CLK1-206ENST00000461326 CENPQQ7L2Z9 268 aaPredicted RBP2.63□□□□□ -1.99
CLK1-206ENST00000461326 PIANPQ8IYJ0 282 aa2.63□□□□□ -1.99
CLK1-206ENST00000461326 ZNF557Q8N988 423 aaPredicted RBP2.63□□□□□ -1.99
CLK1-206ENST00000461326 C20orf203Q8NBC4 194 aa2.63□□□□□ -1.99
CLK1-206ENST00000461326 SDR9C7Q8NEX9 313 aa2.63□□□□□ -1.99
CLK1-206ENST00000461326 OR7G2Q8NG99 324 aa2.63□□□□□ -1.99
CLK1-206ENST00000461326 FANK1Q8TC84 345 aa2.63□□□□□ -1.99
CLK1-206ENST00000461326 FAM151AQ8WW52 585 aa2.63□□□□□ -1.99
CLK1-206ENST00000461326 ARPC1AQ92747 370 aa2.63□□□□□ -1.99
CLK1-206ENST00000461326 SLC38A4Q969I6 547 aa2.63□□□□□ -1.99
CLK1-206ENST00000461326 ZNF578Q96N58 590 aaPredicted RBP2.63□□□□□ -1.99
CLK1-206ENST00000461326 TSNARE1Q96NA8 513 aa2.63□□□□□ -1.99
CLK1-206ENST00000461326 MBOAT4Q96T53 435 aa2.63□□□□□ -1.99
CLK1-206ENST00000461326 GPR61Q9BZJ8 451 aa2.63□□□□□ -1.99
CLK1-206ENST00000461326 RNF167Q9H6Y7 350 aa2.63□□□□□ -1.99
CLK1-206ENST00000461326 ADAP2Q9NPF8 381 aa2.63□□□□□ -1.99
CLK1-206ENST00000461326 CALYQ9NYX4 217 aa2.63□□□□□ -1.99
CLK1-206ENST00000461326 IL17CQ9P0M4 197 aa2.63□□□□□ -1.99
CLK1-206ENST00000461326 SHPKQ9UHJ6 478 aa2.63□□□□□ -1.99
CLK1-206ENST00000461326 LAMC1P11047 1609 aa2.63□□□□□ -1.99
CLK1-206ENST00000461326 NKTRP30414 1462 aaKnown RBP2.63□□□□□ -1.99
CLK1-206ENST00000461326 IQSEC2Q5JU85 1478 aa2.63□□□□□ -1.99
CLK1-206ENST00000461326 ROBO1Q9Y6N7 1651 aa2.63□□□□□ -1.99
CLK1-206ENST00000461326 MSH6P52701 1360 aa2.62□□□□□ -1.99
CLK1-206ENST00000461326 TMEM94Q12767 1356 aa2.62□□□□□ -1.99
CLK1-206ENST00000461326 DHX57Q6P158 1386 aaKnown RBP2.62□□□□□ -1.99
CLK1-206ENST00000461326 KNDC1Q76NI1 1749 aa2.62□□□□□ -1.99
CLK1-206ENST00000461326 PIK3C2GO75747 1445 aa2.62□□□□□ -1.99
CLK1-206ENST00000461326 A0A075B6Q4 140 aa2.62□□□□□ -1.99
CLK1-206ENST00000461326 A0A0G2JN53 185 aa2.62□□□□□ -1.99
CLK1-206ENST00000461326 TCP11X1B4DZS4 312 aa2.62□□□□□ -1.99
CLK1-206ENST00000461326 GOSR2O14653 212 aa2.62□□□□□ -1.99
CLK1-206ENST00000461326 KLF8O95600 359 aaPredicted RBP2.62□□□□□ -1.99
CLK1-206ENST00000461326 IGHV4-34P06331 123 aa2.62□□□□□ -1.99
CLK1-206ENST00000461326 UBTFL1P0CB47 393 aaPredicted RBP2.62□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms