RNA–Protein interactions for RNA: ENST00000461221.5

BRCA1-205, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 5,693 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-205ENST00000461221 GJC3Q8NFK1 279 aa8.31□□□□□ -1.08
BRCA1-205ENST00000461221 APH1BQ8WW43 257 aa8.31□□□□□ -1.08
BRCA1-205ENST00000461221 ASB11Q8WXH4 323 aa8.31□□□□□ -1.08
BRCA1-205ENST00000461221 LCORQ96JN0 433 aaPredicted RBP8.31□□□□□ -1.08
BRCA1-205ENST00000461221 SEMA4CQ9C0C4 833 aa8.31□□□□□ -1.08
BRCA1-205ENST00000461221 MOB1AQ9H8S9 216 aa8.31□□□□□ -1.08
BRCA1-205ENST00000461221 GABRQQ9UN88 632 aa8.31□□□□□ -1.08
BRCA1-205ENST00000461221 ZBTB32Q9Y2Y4 487 aaPredicted RBP8.31□□□□□ -1.08
BRCA1-205ENST00000461221 SERTM2A0A1B0GWG4 89 aa8.31□□□□□ -1.08
BRCA1-205ENST00000461221 H0YGG7 62 aa8.31□□□□□ -1.08
BRCA1-205ENST00000461221 SYT5O00445 386 aa8.31□□□□□ -1.08
BRCA1-205ENST00000461221 ST8SIA3O43173 380 aa8.31□□□□□ -1.08
BRCA1-205ENST00000461221 OR2C1O95371 312 aa8.31□□□□□ -1.08
BRCA1-205ENST00000461221 UTS2O95399 124 aa8.31□□□□□ -1.08
BRCA1-205ENST00000461221 PDGFAP04085 211 aa8.31□□□□□ -1.08
BRCA1-205ENST00000461221 ALPLP05186 524 aa8.31□□□□□ -1.08
BRCA1-205ENST00000461221 CPN1P15169 458 aa8.31□□□□□ -1.08
BRCA1-205ENST00000461221 SPI1P17947 270 aa8.31□□□□□ -1.08
BRCA1-205ENST00000461221 MAP2K6P52564 334 aa8.31□□□□□ -1.08
BRCA1-205ENST00000461221 ELLP55199 621 aaPredicted RBP8.31□□□□□ -1.08
BRCA1-205ENST00000461221 UBE2IP63279 158 aaKnown RBP8.31□□□□□ -1.08
BRCA1-205ENST00000461221 SIX1Q15475 284 aaPredicted RBP8.31□□□□□ -1.08
BRCA1-205ENST00000461221 LPAL2Q16609 132 aa8.31□□□□□ -1.08
BRCA1-205ENST00000461221 ADPRMQ3LIE5 342 aa8.31□□□□□ -1.08
BRCA1-205ENST00000461221 ZNF789Q5FWF6 425 aa8.31□□□□□ -1.08
BRCA1-205ENST00000461221 THNSL2Q86YJ6 484 aa8.31□□□□□ -1.08
BRCA1-205ENST00000461221 ZFPM2Q8WW38 1151 aa8.31□□□□□ -1.08
BRCA1-205ENST00000461221 KLF16Q9BXK1 252 aaPredicted RBP8.31□□□□□ -1.08
BRCA1-205ENST00000461221 ABCD4O14678 606 aa8.31□□□□□ -1.08
BRCA1-205ENST00000461221 HCRTR1O43613 425 aa8.31□□□□□ -1.08
BRCA1-205ENST00000461221 PDGFBP01127 241 aaPredicted RBP8.31□□□□□ -1.08
BRCA1-205ENST00000461221 SHC1P29353 583 aa8.31□□□□□ -1.08
BRCA1-205ENST00000461221 BTG1P62324 171 aa8.31□□□□□ -1.08
BRCA1-205ENST00000461221 PMPCAQ10713 525 aa8.31□□□□□ -1.08
BRCA1-205ENST00000461221 ENDOGQ14249 297 aaKnown RBP8.31□□□□□ -1.08
BRCA1-205ENST00000461221 SLC5A12Q1EHB4 618 aa8.31□□□□□ -1.08
BRCA1-205ENST00000461221 OR5D18Q8NGL1 313 aa8.31□□□□□ -1.08
BRCA1-205ENST00000461221 OR52N1Q8NH53 320 aa8.31□□□□□ -1.08
BRCA1-205ENST00000461221 TNFRSF13CQ96RJ3 184 aa8.31□□□□□ -1.08
BRCA1-205ENST00000461221 MACROD1Q9BQ69 325 aa8.31□□□□□ -1.08
BRCA1-205ENST00000461221 POFUT1Q9H488 388 aa8.31□□□□□ -1.08
BRCA1-205ENST00000461221 TREX1Q9NSU2 369 aa8.31□□□□□ -1.08
BRCA1-205ENST00000461221 CACFD1Q9UGQ2 172 aa8.31□□□□□ -1.08
BRCA1-205ENST00000461221 ARL2-SNX15V9GYD0 113 aa8.31□□□□□ -1.08
BRCA1-205ENST00000461221 ZNF724A8MTY0 619 aa8.3□□□□□ -1.08
BRCA1-205ENST00000461221 M0QYG6 137 aa8.3□□□□□ -1.08
BRCA1-205ENST00000461221 SORBS2O94875 1100 aaKnown RBP8.3□□□□□ -1.08
BRCA1-205ENST00000461221 S100A8P05109 93 aa8.3□□□□□ -1.08
BRCA1-205ENST00000461221 ARSAP15289 507 aa8.3□□□□□ -1.08
BRCA1-205ENST00000461221 FKBP2P26885 142 aaKnown RBP8.3□□□□□ -1.08
BRCA1-205ENST00000461221 CCR7P32248 378 aa8.3□□□□□ -1.08
BRCA1-205ENST00000461221 IL10RAQ13651 578 aa8.3□□□□□ -1.08
BRCA1-205ENST00000461221 FCN2Q15485 313 aa8.3□□□□□ -1.08
BRCA1-205ENST00000461221 DUSP6Q16828 381 aa8.3□□□□□ -1.08
BRCA1-205ENST00000461221 KHDC1LQ5JSQ8 128 aa8.3□□□□□ -1.08
BRCA1-205ENST00000461221 GLIPR1L1Q6UWM5 242 aa8.3□□□□□ -1.08
BRCA1-205ENST00000461221 MAMDC4Q6UXC1 1216 aa8.3□□□□□ -1.08
BRCA1-205ENST00000461221 RETREG3Q86VR2 466 aa8.3□□□□□ -1.08
BRCA1-205ENST00000461221 OR2L13Q8N349 312 aa8.3□□□□□ -1.08
BRCA1-205ENST00000461221 OR10G3Q8NGC4 313 aa8.3□□□□□ -1.08
BRCA1-205ENST00000461221 OR10Z1Q8NGY1 313 aa8.3□□□□□ -1.08
BRCA1-205ENST00000461221 TRIB1Q96RU8 372 aa8.3□□□□□ -1.08
BRCA1-205ENST00000461221 LYSMD1Q96S90 227 aa8.3□□□□□ -1.08
BRCA1-205ENST00000461221 NKX6-2Q9C056 277 aaPredicted RBP8.3□□□□□ -1.08
BRCA1-205ENST00000461221 MED20Q9H944 212 aa8.3□□□□□ -1.08
BRCA1-205ENST00000461221 BARX1Q9HBU1 254 aaPredicted RBP8.3□□□□□ -1.08
BRCA1-205ENST00000461221 DUSP13Q9UII6 198 aa8.3□□□□□ -1.08
BRCA1-205ENST00000461221 B3GALT5Q9Y2C3 310 aa8.3□□□□□ -1.08
BRCA1-205ENST00000461221 TRDV1A0A1B0GX56 115 aa8.3□□□□□ -1.08
BRCA1-205ENST00000461221 H7C1C5 153 aa8.3□□□□□ -1.08
BRCA1-205ENST00000461221 MT-ATP6P00846 226 aa8.3□□□□□ -1.08
BRCA1-205ENST00000461221 MBP02144 154 aa8.3□□□□□ -1.08
BRCA1-205ENST00000461221 RAB1AP62820 205 aa8.3□□□□□ -1.08
BRCA1-205ENST00000461221 RANP62826 216 aaKnown RBP8.3□□□□□ -1.08
BRCA1-205ENST00000461221 FOXK2Q01167 660 aa8.3□□□□□ -1.08
BRCA1-205ENST00000461221 PHLDA2Q53GA4 152 aa8.3□□□□□ -1.08
BRCA1-205ENST00000461221 ZNF425Q6IV72 752 aa8.3□□□□□ -1.08
BRCA1-205ENST00000461221 DOK3Q7L591 496 aa8.3□□□□□ -1.08
BRCA1-205ENST00000461221 DHRS9Q9BPW9 319 aa8.3□□□□□ -1.08
BRCA1-205ENST00000461221 AMBRA1Q9C0C7 1298 aa8.3□□□□□ -1.08
BRCA1-205ENST00000461221 ACTR3CQ9C0K3 210 aaPredicted RBP8.3□□□□□ -1.08
BRCA1-205ENST00000461221 A4GALTQ9NPC4 353 aa8.3□□□□□ -1.08
BRCA1-205ENST00000461221 FAM53CQ9NYF3 392 aa8.3□□□□□ -1.08
BRCA1-205ENST00000461221 AK3Q9UIJ7 227 aa8.3□□□□□ -1.08
BRCA1-205ENST00000461221 SPEF2Q9C093 1822 aa8.3□□□□□ -1.08
BRCA1-205ENST00000461221 LOC105378220A0A1B0GUY1 285 aaPredicted RBP8.3□□□□□ -1.08
BRCA1-205ENST00000461221 PVRP15151 417 aa8.3□□□□□ -1.08
BRCA1-205ENST00000461221 SUMO1P63165 101 aaKnown RBP8.3□□□□□ -1.08
BRCA1-205ENST00000461221 MRPS21P82921 87 aaKnown RBP8.3□□□□□ -1.08
BRCA1-205ENST00000461221 CDK5Q00535 292 aa8.3□□□□□ -1.08
BRCA1-205ENST00000461221 ZNF85Q03923 595 aa8.3□□□□□ -1.08
BRCA1-205ENST00000461221 CDKN3Q16667 212 aa8.3□□□□□ -1.08
BRCA1-205ENST00000461221 RTL8BQ17RB0 113 aa8.3□□□□□ -1.08
BRCA1-205ENST00000461221 ACOT6Q3I5F7 207 aaPredicted RBP8.3□□□□□ -1.08
BRCA1-205ENST00000461221 SPRED1Q7Z699 444 aa8.3□□□□□ -1.08
BRCA1-205ENST00000461221 TCTE3Q8IZS6 198 aa8.3□□□□□ -1.08
BRCA1-205ENST00000461221 ZNF321PQ8N8H1 164 aa8.3□□□□□ -1.08
BRCA1-205ENST00000461221 NRG4Q8WWG1 115 aa8.3□□□□□ -1.08
BRCA1-205ENST00000461221 SLC35A4Q96G79 324 aa8.3□□□□□ -1.08
BRCA1-205ENST00000461221 TWSG1Q9GZX9 223 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms