RNA–Protein interactions for RNA: ENST00000460822.1

HPS3-203, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-203ENST00000460822 MRPS31Q92665 395 aaKnown RBP2.34□□□□□ -2.04
HPS3-203ENST00000460822 C8orf44Q96CB5 159 aa2.34□□□□□ -2.04
HPS3-203ENST00000460822 MSANTD3Q96H12 275 aa2.34□□□□□ -2.04
HPS3-203ENST00000460822 POM121L2Q96KW2 1035 aa2.34□□□□□ -2.04
HPS3-203ENST00000460822 ZIM3Q96PE6 472 aa2.34□□□□□ -2.04
HPS3-203ENST00000460822 KCNA7Q96RP8 456 aa2.34□□□□□ -2.04
HPS3-203ENST00000460822 OPRPNQ99935 248 aaPredicted RBP2.34□□□□□ -2.04
HPS3-203ENST00000460822 RACGAP1Q9H0H5 632 aa2.34□□□□□ -2.04
HPS3-203ENST00000460822 OPN3Q9H1Y3 402 aaPredicted RBP2.34□□□□□ -2.04
HPS3-203ENST00000460822 OR2AG1Q9H205 316 aa2.34□□□□□ -2.04
HPS3-203ENST00000460822 CENPHQ9H3R5 247 aa2.34□□□□□ -2.04
HPS3-203ENST00000460822 RBKSQ9H477 322 aa2.34□□□□□ -2.04
HPS3-203ENST00000460822 ZNF385DQ9H6B1 395 aa2.34□□□□□ -2.04
HPS3-203ENST00000460822 IMPAD1Q9NX62 359 aa2.34□□□□□ -2.04
HPS3-203ENST00000460822 PHF11Q9UIL8 331 aa2.34□□□□□ -2.04
HPS3-203ENST00000460822 GGA2Q9UJY4 613 aa2.34□□□□□ -2.04
HPS3-203ENST00000460822 COPS3Q9UNS2 423 aa2.34□□□□□ -2.04
HPS3-203ENST00000460822 TFR2Q9UP52 801 aa2.34□□□□□ -2.04
HPS3-203ENST00000460822 ERVW-1Q9UQF0 538 aa2.34□□□□□ -2.04
HPS3-203ENST00000460822 GLI3P10071 1580 aa2.34□□□□□ -2.04
HPS3-203ENST00000460822 NFAT5O94916 1531 aa2.33□□□□□ -2.04
HPS3-203ENST00000460822 KBTBD11-OT1A0A1B0GTJ5 212 aa2.33□□□□□ -2.04
HPS3-203ENST00000460822 SMCO2A6NFE2 343 aa2.33□□□□□ -2.04
HPS3-203ENST00000460822 IDSB3KWA1 339 aa2.33□□□□□ -2.04
HPS3-203ENST00000460822 E7ESA3 106 aa2.33□□□□□ -2.04
HPS3-203ENST00000460822 E9PAM4 449 aa2.33□□□□□ -2.04
HPS3-203ENST00000460822 SULT2B1O00204 365 aa2.33□□□□□ -2.04
HPS3-203ENST00000460822 SAP18O00422 153 aaKnown RBP2.33□□□□□ -2.04
HPS3-203ENST00000460822 RAB29O14966 203 aa2.33□□□□□ -2.04
HPS3-203ENST00000460822 POLR1CO15160 346 aaPredicted RBP2.33□□□□□ -2.04
HPS3-203ENST00000460822 CETN3O15182 167 aa2.33□□□□□ -2.04
HPS3-203ENST00000460822 CHST1O43916 411 aa2.33□□□□□ -2.04
HPS3-203ENST00000460822 NOL4O94818 638 aa2.33□□□□□ -2.04
HPS3-203ENST00000460822 VENTXO95231 258 aa2.33□□□□□ -2.04
HPS3-203ENST00000460822 LYPD3O95274 346 aa2.33□□□□□ -2.04
HPS3-203ENST00000460822 SLC2A10O95528 541 aa2.33□□□□□ -2.04
HPS3-203ENST00000460822 TSPAN13O95857 204 aa2.33□□□□□ -2.04
HPS3-203ENST00000460822 FAM107AO95990 144 aa2.33□□□□□ -2.04
HPS3-203ENST00000460822 RENP00797 406 aa2.33□□□□□ -2.04
HPS3-203ENST00000460822 LGALS2P05162 132 aa2.33□□□□□ -2.04
HPS3-203ENST00000460822 SERPINE2P07093 398 aa2.33□□□□□ -2.04
HPS3-203ENST00000460822 H2AFZP0C0S5 128 aa2.33□□□□□ -2.04
HPS3-203ENST00000460822 LAMP1P11279 417 aa2.33□□□□□ -2.04
HPS3-203ENST00000460822 HTR1FP30939 366 aa2.33□□□□□ -2.04
HPS3-203ENST00000460822 IL2RGP31785 369 aa2.33□□□□□ -2.04
HPS3-203ENST00000460822 IFNA8P32881 189 aa2.33□□□□□ -2.04
HPS3-203ENST00000460822 EPHX2P34913 555 aa2.33□□□□□ -2.04
HPS3-203ENST00000460822 RFX3P48380 749 aa2.33□□□□□ -2.04
HPS3-203ENST00000460822 ATP12AP54707 1039 aa2.33□□□□□ -2.04
HPS3-203ENST00000460822 HMGCS2P54868 508 aa2.33□□□□□ -2.04
HPS3-203ENST00000460822 PKNOX1P55347 436 aa2.33□□□□□ -2.04
HPS3-203ENST00000460822 RPS14P62263 151 aaKnown RBP2.33□□□□□ -2.04
HPS3-203ENST00000460822 SCRN3Q0VDG4 424 aa2.33□□□□□ -2.04
HPS3-203ENST00000460822 SELENBP1Q13228 472 aa2.33□□□□□ -2.04
HPS3-203ENST00000460822 GRB7Q14451 532 aa2.33□□□□□ -2.04
HPS3-203ENST00000460822 CCDC122Q5T0U0 273 aa2.33□□□□□ -2.04
HPS3-203ENST00000460822 KCTD16Q68DU8 428 aa2.33□□□□□ -2.04
HPS3-203ENST00000460822 C22orf42Q6IC83 251 aa2.33□□□□□ -2.04
HPS3-203ENST00000460822 WDR59Q6PJI9 974 aa2.33□□□□□ -2.04
HPS3-203ENST00000460822 CCDC137Q6PK04 289 aaKnown RBP2.33□□□□□ -2.04
HPS3-203ENST00000460822 DEGS2Q6QHC5 323 aa2.33□□□□□ -2.04
HPS3-203ENST00000460822 CCDC121Q6ZUS5 278 aa2.33□□□□□ -2.04
HPS3-203ENST00000460822 TMUB2Q71RG4 321 aa2.33□□□□□ -2.04
HPS3-203ENST00000460822 ASCL5Q7RTU5 278 aa2.33□□□□□ -2.04
HPS3-203ENST00000460822 CD302Q8IX05 232 aa2.33□□□□□ -2.04
HPS3-203ENST00000460822 C9orf40Q8IXQ3 194 aa2.33□□□□□ -2.04
HPS3-203ENST00000460822 TPRX1Q8N7U7 411 aa2.33□□□□□ -2.04
HPS3-203ENST00000460822 ASCC1Q8N9N2 400 aaKnown RBP2.33□□□□□ -2.04
HPS3-203ENST00000460822 OR4A15Q8NGL6 344 aa2.33□□□□□ -2.04
HPS3-203ENST00000460822 ZPLD1Q8TCW7 415 aa2.33□□□□□ -2.04
HPS3-203ENST00000460822 CD300LFQ8TDQ1 290 aa2.33□□□□□ -2.04
HPS3-203ENST00000460822 GPR151Q8TDV0 419 aa2.33□□□□□ -2.04
HPS3-203ENST00000460822 TCTEX1D2Q8WW35 142 aa2.33□□□□□ -2.04
HPS3-203ENST00000460822 ASZ1Q8WWH4 475 aa2.33□□□□□ -2.04
HPS3-203ENST00000460822 UFD1Q92890 307 aa2.33□□□□□ -2.04
HPS3-203ENST00000460822 ZBED6CLQ96FA7 236 aaPredicted RBP2.33□□□□□ -2.04
HPS3-203ENST00000460822 NOL4LQ96MY1 436 aaPredicted RBP2.33□□□□□ -2.04
HPS3-203ENST00000460822 MCCC1Q96RQ3 725 aaPredicted RBP2.33□□□□□ -2.04
HPS3-203ENST00000460822 TBX15Q96SF7 602 aa2.33□□□□□ -2.04
HPS3-203ENST00000460822 MCRIP2Q9BUT9 160 aaKnown RBP2.33□□□□□ -2.04
HPS3-203ENST00000460822 LRRC61Q9BV99 259 aa2.33□□□□□ -2.04
HPS3-203ENST00000460822 ZBP1Q9H171 429 aa2.33□□□□□ -2.04
HPS3-203ENST00000460822 NEUROG2Q9H2A3 272 aa2.33□□□□□ -2.04
HPS3-203ENST00000460822 SPRR3Q9UBC9 169 aa2.33□□□□□ -2.04
HPS3-203ENST00000460822 CLN8Q9UBY8 286 aa2.33□□□□□ -2.04
HPS3-203ENST00000460822 TMCO1Q9UM00 188 aa2.33□□□□□ -2.04
HPS3-203ENST00000460822 KCNIP3Q9Y2W7 256 aa2.33□□□□□ -2.04
HPS3-203ENST00000460822 GMEB1Q9Y692 573 aa2.33□□□□□ -2.04
HPS3-203ENST00000460822 UBN2Q6ZU65 1347 aa2.33□□□□□ -2.04
HPS3-203ENST00000460822 PLEKHG1Q9ULL1 1385 aa2.33□□□□□ -2.04
HPS3-203ENST00000460822 ARAP2Q8WZ64 1704 aa2.33□□□□□ -2.04
HPS3-203ENST00000460822 DISP2A7MBM2 1401 aa2.33□□□□□ -2.04
HPS3-203ENST00000460822 ADAMTS13Q76LX8 1427 aa2.33□□□□□ -2.04
HPS3-203ENST00000460822 BAZ2BQ9UIF8 2168 aaKnown RBP2.33□□□□□ -2.04
HPS3-203ENST00000460822 ARHGAP23Q9P227 1491 aa2.33□□□□□ -2.04
HPS3-203ENST00000460822 PLCH1Q4KWH8 1693 aa2.32□□□□□ -2.04
HPS3-203ENST00000460822 TRAV9-2A0A087WT02 112 aa2.32□□□□□ -2.04
HPS3-203ENST00000460822 OR6C74A6NCV1 312 aa2.32□□□□□ -2.04
HPS3-203ENST00000460822 ZNF233A6NK53 670 aa2.32□□□□□ -2.04
HPS3-203ENST00000460822 ZNF705EA8MWA4 302 aaPredicted RBP2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms