RNA–Protein interactions for RNA: ENST00000459639.5

U2AF1-204, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,675 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-204ENST00000459639 NDUFB11Q9NX14 153 aa21.79■■□□□ 1.08
U2AF1-204ENST00000459639 PCDHGA9Q9Y5G4 932 aaKnown RBP21.79■■□□□ 1.08
U2AF1-204ENST00000459639 ALPK2Q86TB3 2170 aa21.78■■□□□ 1.08
U2AF1-204ENST00000459639 IGHV3-15A0A0B4J1V0 119 aa21.78■■□□□ 1.08
U2AF1-204ENST00000459639 CXCL13O43927 109 aa21.78■■□□□ 1.08
U2AF1-204ENST00000459639 IGHG1P01857 330 aa21.78■■□□□ 1.08
U2AF1-204ENST00000459639 NR4A1P22736 598 aa21.78■■□□□ 1.08
U2AF1-204ENST00000459639 GADD45AP24522 165 aa21.78■■□□□ 1.08
U2AF1-204ENST00000459639 CLDN15P56746 228 aa21.78■■□□□ 1.08
U2AF1-204ENST00000459639 ACTA2P62736 377 aa21.78■■□□□ 1.08
U2AF1-204ENST00000459639 ACTG2P63267 376 aa21.78■■□□□ 1.08
U2AF1-204ENST00000459639 TPBGQ13641 420 aa21.78■■□□□ 1.08
U2AF1-204ENST00000459639 TIMM50Q3ZCQ8 353 aa21.78■■□□□ 1.08
U2AF1-204ENST00000459639 ERI1Q8IV48 349 aaKnown RBP21.78■■□□□ 1.08
U2AF1-204ENST00000459639 SPACA3Q8IXA5 215 aa21.78■■□□□ 1.08
U2AF1-204ENST00000459639 SYT14Q8NB59 555 aa21.78■■□□□ 1.08
U2AF1-204ENST00000459639 NOXO1Q8NFA2 376 aa21.78■■□□□ 1.08
U2AF1-204ENST00000459639 SMAP2Q8WU79 429 aaPredicted RBP21.78■■□□□ 1.08
U2AF1-204ENST00000459639 CPNE4Q96A23 557 aaPredicted RBP21.78■■□□□ 1.08
U2AF1-204ENST00000459639 SLC35F4A4IF30 521 aa21.77■■□□□ 1.08
U2AF1-204ENST00000459639 SLC22A1O15245 554 aa21.77■■□□□ 1.08
U2AF1-204ENST00000459639 AIREO43918 545 aa21.77■■□□□ 1.08
U2AF1-204ENST00000459639 MT-ND5P03915 603 aa21.77■■□□□ 1.08
U2AF1-204ENST00000459639 PGA4P0DJD7 388 aa21.77■■□□□ 1.08
U2AF1-204ENST00000459639 PGA3P0DJD8 388 aa21.77■■□□□ 1.08
U2AF1-204ENST00000459639 ZNF708P17019 499 aa21.77■■□□□ 1.08
U2AF1-204ENST00000459639 EIF1AXP47813 144 aaKnown RBP21.77■■□□□ 1.08
U2AF1-204ENST00000459639 SLC17A1Q14916 467 aa21.77■■□□□ 1.08
U2AF1-204ENST00000459639 BCL2A1Q16548 175 aa21.77■■□□□ 1.08
U2AF1-204ENST00000459639 IGFL3Q6UXB1 125 aa21.77■■□□□ 1.08
U2AF1-204ENST00000459639 PHC2Q8IXK0 858 aa21.77■■□□□ 1.08
U2AF1-204ENST00000459639 OR9K2Q8NGE7 335 aa21.77■■□□□ 1.08
U2AF1-204ENST00000459639 FNDC8Q8TC99 324 aa21.77■■□□□ 1.08
U2AF1-204ENST00000459639 UFD1Q92890 307 aa21.77■■□□□ 1.08
U2AF1-204ENST00000459639 INTS14Q96SY0 518 aa21.77■■□□□ 1.08
U2AF1-204ENST00000459639 ZDHHC11Q9H8X9 412 aa21.77■■□□□ 1.08
U2AF1-204ENST00000459639 ISG20L2Q9H9L3 353 aaKnown RBP21.77■■□□□ 1.08
U2AF1-204ENST00000459639 TNRC6AQ8NDV7 1962 aaKnown RBP21.76■■□□□ 1.07
U2AF1-204ENST00000459639 TVP23AA6NH52 213 aa21.76■■□□□ 1.07
U2AF1-204ENST00000459639 CENPBD1B2RD01 187 aa21.76■■□□□ 1.07
U2AF1-204ENST00000459639 NPIPA2E9PIF3 369 aa21.76■■□□□ 1.07
U2AF1-204ENST00000459639 ZNF670-ZNF695F2Z2N8 137 aa21.76■■□□□ 1.07
U2AF1-204ENST00000459639 NPIPA3F8WFD2 350 aa21.76■■□□□ 1.07
U2AF1-204ENST00000459639 ACTL6AO96019 429 aa21.76■■□□□ 1.07
U2AF1-204ENST00000459639 PCSK6P29122 969 aa21.76■■□□□ 1.07
U2AF1-204ENST00000459639 CLDN18P56856 261 aa21.76■■□□□ 1.07
U2AF1-204ENST00000459639 CLRN1P58418 232 aa21.76■■□□□ 1.07
U2AF1-204ENST00000459639 GLO1Q04760 184 aa21.76■■□□□ 1.07
U2AF1-204ENST00000459639 AQP6Q13520 282 aa21.76■■□□□ 1.07
U2AF1-204ENST00000459639 CREB3L2Q70SY1 520 aa21.76■■□□□ 1.07
U2AF1-204ENST00000459639 SSX6Q7RTT6 188 aa21.76■■□□□ 1.07
U2AF1-204ENST00000459639 SYS1Q8N2H4 156 aa21.76■■□□□ 1.07
U2AF1-204ENST00000459639 ZADH2Q8N4Q0 377 aa21.76■■□□□ 1.07
U2AF1-204ENST00000459639 RFLNBQ8N5W9 214 aa21.76■■□□□ 1.07
U2AF1-204ENST00000459639 RBP7Q96R05 134 aa21.76■■□□□ 1.07
U2AF1-204ENST00000459639 COPS3Q9UNS2 423 aa21.76■■□□□ 1.07
U2AF1-204ENST00000459639 SPTBN2O15020 2390 aa21.76■■□□□ 1.07
U2AF1-204ENST00000459639 ZNF726A6NNF4 738 aa21.75■■□□□ 1.07
U2AF1-204ENST00000459639 KHDRBS3O75525 346 aaKnown RBP21.75■■□□□ 1.07
U2AF1-204ENST00000459639 LALBAP00709 142 aa21.75■■□□□ 1.07
U2AF1-204ENST00000459639 HCCSP53701 268 aa21.75■■□□□ 1.07
U2AF1-204ENST00000459639 FMODQ06828 376 aa21.75■■□□□ 1.07
U2AF1-204ENST00000459639 CDONQ4KMG0 1287 aa21.75■■□□□ 1.07
U2AF1-204ENST00000459639 THEM4Q5T1C6 240 aa21.75■■□□□ 1.07
U2AF1-204ENST00000459639 LIPKQ5VXJ0 399 aa21.75■■□□□ 1.07
U2AF1-204ENST00000459639 ABLIM2Q6H8Q1 611 aa21.75■■□□□ 1.07
U2AF1-204ENST00000459639 CDC20BQ86Y33 519 aa21.75■■□□□ 1.07
U2AF1-204ENST00000459639 MEIOBQ8N635 442 aa21.75■■□□□ 1.07
U2AF1-204ENST00000459639 RPL3LQ92901 407 aaKnown RBP21.75■■□□□ 1.07
U2AF1-204ENST00000459639 ABTB1Q969K4 478 aaPredicted RBP21.75■■□□□ 1.07
U2AF1-204ENST00000459639 C4orf36Q96KX1 117 aa21.75■■□□□ 1.07
U2AF1-204ENST00000459639 BABAM2Q9NXR7 383 aa21.75■■□□□ 1.07
U2AF1-204ENST00000459639 NR2C1P13056 603 aa21.75■■□□□ 1.07
U2AF1-204ENST00000459639 PTGS2P35354 604 aa21.75■■□□□ 1.07
U2AF1-204ENST00000459639 EIF2S3P41091 472 aaKnown RBP21.75■■□□□ 1.07
U2AF1-204ENST00000459639 CLDN17P56750 224 aa21.75■■□□□ 1.07
U2AF1-204ENST00000459639 NFATC3Q12968 1075 aa21.75■■□□□ 1.07
U2AF1-204ENST00000459639 RNFT1Q5M7Z0 435 aa21.75■■□□□ 1.07
U2AF1-204ENST00000459639 KLBQ86Z14 1044 aa21.75■■□□□ 1.07
U2AF1-204ENST00000459639 OR6N2Q8NGY6 317 aa21.75■■□□□ 1.07
U2AF1-204ENST00000459639 NEIL3Q8TAT5 605 aa21.75■■□□□ 1.07
U2AF1-204ENST00000459639 WDR76Q9H967 626 aa21.75■■□□□ 1.07
U2AF1-204ENST00000459639 TRIM36Q9NQ86 728 aa21.75■■□□□ 1.07
U2AF1-204ENST00000459639 ZMIZ1Q9ULJ6 1067 aa21.75■■□□□ 1.07
U2AF1-204ENST00000459639 A0A1W2PPW3 197 aa21.74■■□□□ 1.07
U2AF1-204ENST00000459639 HLA-DQA2P01906 255 aa21.74■■□□□ 1.07
U2AF1-204ENST00000459639 CAMK2DQ13557 499 aa21.74■■□□□ 1.07
U2AF1-204ENST00000459639 ETFDHQ16134 617 aa21.74■■□□□ 1.07
U2AF1-204ENST00000459639 VASNQ6EMK4 673 aa21.74■■□□□ 1.07
U2AF1-204ENST00000459639 OR51E2Q9H255 320 aa21.74■■□□□ 1.07
U2AF1-204ENST00000459639 CCDC86Q9H6F5 360 aaKnown RBP21.74■■□□□ 1.07
U2AF1-204ENST00000459639 PAQR5Q9NXK6 330 aaPredicted RBP21.74■■□□□ 1.07
U2AF1-204ENST00000459639 COA3Q9Y2R0 106 aaPredicted RBP21.74■■□□□ 1.07
U2AF1-204ENST00000459639 TMEM14AQ9Y6G1 99 aa21.74■■□□□ 1.07
U2AF1-204ENST00000459639 GPANK1O95872 356 aa21.73■■□□□ 1.07
U2AF1-204ENST00000459639 PSMA1P25786 263 aaKnown RBP21.73■■□□□ 1.07
U2AF1-204ENST00000459639 TAS2R43P59537 309 aa21.73■■□□□ 1.07
U2AF1-204ENST00000459639 RPS3AP61247 264 aaKnown RBP21.73■■□□□ 1.07
U2AF1-204ENST00000459639 SPCS2Q15005 226 aa21.73■■□□□ 1.07
U2AF1-204ENST00000459639 HIST3H3Q16695 136 aa21.73■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms