RNA–Protein interactions for RNA: ENST00000455732.5

USP39-208, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-208ENST00000455732 TRMUO75648 421 aaKnown RBP15.09■□□□□ 0.01
USP39-208ENST00000455732 SEC14L2O76054 403 aa15.09■□□□□ 0.01
USP39-208ENST00000455732 DIRAS1O95057 198 aa15.09■□□□□ 0.01
USP39-208ENST00000455732 FABP3P05413 133 aa15.09■□□□□ 0.01
USP39-208ENST00000455732 ACADSP16219 412 aa15.09■□□□□ 0.01
USP39-208ENST00000455732 GPR4P46093 362 aa15.09■□□□□ 0.01
USP39-208ENST00000455732 LIMS1P48059 325 aa15.09■□□□□ 0.01
USP39-208ENST00000455732 CLRN1P58418 232 aa15.09■□□□□ 0.01
USP39-208ENST00000455732 TUBA1BP68363 451 aa15.09■□□□□ 0.01
USP39-208ENST00000455732 TUBA4AP68366 448 aa15.09■□□□□ 0.01
USP39-208ENST00000455732 TRIM25Q14258 630 aaKnown RBP15.09■□□□□ 0.01
USP39-208ENST00000455732 NRN1LQ496H8 165 aa15.09■□□□□ 0.01
USP39-208ENST00000455732 FAM205BPQ63HN1 556 aa15.09■□□□□ 0.01
USP39-208ENST00000455732 B3GLCTQ6Y288 498 aa15.09■□□□□ 0.01
USP39-208ENST00000455732 TUBA1AQ71U36 451 aa15.09■□□□□ 0.01
USP39-208ENST00000455732 PIWIL3Q7Z3Z3 882 aaKnown RBP15.09■□□□□ 0.01
USP39-208ENST00000455732 OR13C2Q8NGS9 318 aa15.09■□□□□ 0.01
USP39-208ENST00000455732 POP5Q969H6 163 aaKnown RBP15.09■□□□□ 0.01
USP39-208ENST00000455732 Q96MF0 132 aa15.09■□□□□ 0.01
USP39-208ENST00000455732 ZNF347Q96SE7 839 aa15.09■□□□□ 0.01
USP39-208ENST00000455732 DHRS9Q9BPW9 319 aa15.09■□□□□ 0.01
USP39-208ENST00000455732 GSX1Q9H4S2 264 aaPredicted RBP15.09■□□□□ 0.01
USP39-208ENST00000455732 KRCC1Q9NPI7 259 aaPredicted RBP15.09■□□□□ 0.01
USP39-208ENST00000455732 B3GNT2Q9NY97 397 aa15.09■□□□□ 0.01
USP39-208ENST00000455732 POU2F3Q9UKI9 436 aa15.09■□□□□ 0.01
USP39-208ENST00000455732 ARFGEF3Q5TH69 2177 aa15.09■□□□□ 0.01
USP39-208ENST00000455732 CSPG4Q6UVK1 2322 aa15.08■□□□□ 0
USP39-208ENST00000455732 TRAV27A0A087WT01 109 aa15.08■□□□□ 0
USP39-208ENST00000455732 E7EQL1 145 aa15.08■□□□□ 0
USP39-208ENST00000455732 DHHO43323 396 aa15.08■□□□□ 0
USP39-208ENST00000455732 CD8AP01732 235 aa15.08■□□□□ 0
USP39-208ENST00000455732 QDPRP09417 244 aa15.08■□□□□ 0
USP39-208ENST00000455732 CECR9P0C854 216 aa15.08■□□□□ 0
USP39-208ENST00000455732 NR2C1P13056 603 aa15.08■□□□□ 0
USP39-208ENST00000455732 B4GALT1P15291 398 aa15.08■□□□□ 0
USP39-208ENST00000455732 ARR3P36575 388 aa15.08■□□□□ 0
USP39-208ENST00000455732 MAGEA2P43356 314 aa15.08■□□□□ 0
USP39-208ENST00000455732 OMPP47874 163 aa15.08■□□□□ 0
USP39-208ENST00000455732 RPL27P61353 136 aaKnown RBP15.08■□□□□ 0
USP39-208ENST00000455732 SEC23BQ15437 767 aa15.08■□□□□ 0
USP39-208ENST00000455732 C10orf128Q5T292 105 aa15.08■□□□□ 0
USP39-208ENST00000455732 ZNF544Q6NX49 715 aa15.08■□□□□ 0
USP39-208ENST00000455732 MEX3DQ86XN8 651 aaKnown RBP15.08■□□□□ 0
USP39-208ENST00000455732 OR4K5Q8NGD3 323 aa15.08■□□□□ 0
USP39-208ENST00000455732 OR51A7Q8NH64 312 aa15.08■□□□□ 0
USP39-208ENST00000455732 NANOS1Q8WY41 292 aaKnown RBP15.08■□□□□ 0
USP39-208ENST00000455732 MCHR2Q969V1 340 aa15.08■□□□□ 0
USP39-208ENST00000455732 NMD3Q96D46 503 aaKnown RBP15.08■□□□□ 0
USP39-208ENST00000455732 ASB9Q96DX5 294 aa15.08■□□□□ 0
USP39-208ENST00000455732 FAM46AQ96IP4 442 aaKnown RBP15.08■□□□□ 0
USP39-208ENST00000455732 TNFRSF13CQ96RJ3 184 aa15.08■□□□□ 0
USP39-208ENST00000455732 KCNK17Q96T54 332 aa15.08■□□□□ 0
USP39-208ENST00000455732 TRAF4Q9BUZ4 470 aaPredicted RBP15.08■□□□□ 0
USP39-208ENST00000455732 ALG12Q9BV10 488 aa15.08■□□□□ 0
USP39-208ENST00000455732 DENND2DQ9H6A0 471 aaPredicted RBP15.08■□□□□ 0
USP39-208ENST00000455732 SMURF2Q9HAU4 748 aa15.08■□□□□ 0
USP39-208ENST00000455732 TMEM38BQ9NVV0 291 aa15.08■□□□□ 0
USP39-208ENST00000455732 ZNF224Q9NZL3 707 aa15.08■□□□□ 0
USP39-208ENST00000455732 TCRBV5S2A0A599 114 aa15.07■□□□□ 0
USP39-208ENST00000455732 SH3PXD2BA1X283 911 aa15.07■□□□□ 0
USP39-208ENST00000455732 ATP6V1G2-DDX39BF2Z307 99 aa15.07■□□□□ 0
USP39-208ENST00000455732 PDE5AO76074 875 aa15.07■□□□□ 0
USP39-208ENST00000455732 UBOX5O94941 541 aa15.07■□□□□ 0
USP39-208ENST00000455732 INHBBP09529 407 aa15.07■□□□□ 0
USP39-208ENST00000455732 TTKP33981 857 aa15.07■□□□□ 0
USP39-208ENST00000455732 ATP5J2P56134 94 aa15.07■□□□□ 0
USP39-208ENST00000455732 CTXN1P60606 82 aa15.07■□□□□ 0
USP39-208ENST00000455732 SPIBQ01892 262 aa15.07■□□□□ 0
USP39-208ENST00000455732 NAAAQ02083 359 aa15.07■□□□□ 0
USP39-208ENST00000455732 ZBED5Q49AG3 693 aa15.07■□□□□ 0
USP39-208ENST00000455732 CYP2R1Q6VVX0 501 aa15.07■□□□□ 0
USP39-208ENST00000455732 MDP1Q86V88 176 aa15.07■□□□□ 0
USP39-208ENST00000455732 DHFR2Q86XF0 187 aa15.07■□□□□ 0
USP39-208ENST00000455732 ZDHHC21Q8IVQ6 265 aa15.07■□□□□ 0
USP39-208ENST00000455732 ZNF519Q8TB69 540 aa15.07■□□□□ 0
USP39-208ENST00000455732 FNDC8Q8TC99 324 aa15.07■□□□□ 0
USP39-208ENST00000455732 HDAC2Q92769 488 aaKnown RBP15.07■□□□□ 0
USP39-208ENST00000455732 TSPAN32Q96QS1 320 aa15.07■□□□□ 0
USP39-208ENST00000455732 GPX7Q96SL4 187 aaPredicted RBP15.07■□□□□ 0
USP39-208ENST00000455732 NDEL1Q9GZM8 345 aa15.07■□□□□ 0
USP39-208ENST00000455732 MAGIXQ9H6Y5 334 aa15.07■□□□□ 0
USP39-208ENST00000455732 MOKQ9UQ07 419 aa15.07■□□□□ 0
USP39-208ENST00000455732 A6NIZ1 184 aa15.06■□□□□ 0
USP39-208ENST00000455732 MGRN1O60291 552 aa15.06■□□□□ 0
USP39-208ENST00000455732 UBL3O95164 117 aa15.06■□□□□ 0
USP39-208ENST00000455732 GADD45GO95257 159 aa15.06■□□□□ 0
USP39-208ENST00000455732 HLA-HP01893 362 aa15.06■□□□□ 0
USP39-208ENST00000455732 CRYAAP02489 173 aa15.06■□□□□ 0
USP39-208ENST00000455732 CD14P08571 375 aa15.06■□□□□ 0
USP39-208ENST00000455732 ZNF26P17031 533 aaPredicted RBP15.06■□□□□ 0
USP39-208ENST00000455732 CAPZA2P47755 286 aa15.06■□□□□ 0
USP39-208ENST00000455732 IDH3GP51553 393 aaPredicted RBP15.06■□□□□ 0
USP39-208ENST00000455732 RAP1BP61224 184 aa15.06■□□□□ 0
USP39-208ENST00000455732 RAP1AP62834 184 aa15.06■□□□□ 0
USP39-208ENST00000455732 MS4A2Q01362 244 aa15.06■□□□□ 0
USP39-208ENST00000455732 TOP3AQ13472 1001 aaPredicted RBP15.06■□□□□ 0
USP39-208ENST00000455732 GSG1Q2KHT4 349 aa15.06■□□□□ 0
USP39-208ENST00000455732 DNAL1Q4LDG9 190 aa15.06■□□□□ 0
USP39-208ENST00000455732 AGAP6Q5VW22 663 aa15.06■□□□□ 0
USP39-208ENST00000455732 C11orf71Q6IPW1 123 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms