RNA–Protein interactions for RNA: ENST00000455359.5

HMGXB4-204, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 1,325 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-204ENST00000455359 CRISP1P54107 249 aa12.6□□□□□ -0.39
HMGXB4-204ENST00000455359 RAD23AP54725 363 aa12.6□□□□□ -0.39
HMGXB4-204ENST00000455359 ROR2Q01974 943 aaKnown RBP12.6□□□□□ -0.39
HMGXB4-204ENST00000455359 RUNX1T1Q06455 604 aa12.6□□□□□ -0.39
HMGXB4-204ENST00000455359 FAM27E3Q08E93 113 aa12.6□□□□□ -0.39
HMGXB4-204ENST00000455359 RIPK1Q13546 671 aa12.6□□□□□ -0.39
HMGXB4-204ENST00000455359 CLEC12AQ5QGZ9 265 aa12.6□□□□□ -0.39
HMGXB4-204ENST00000455359 C10orf128Q5T292 105 aa12.6□□□□□ -0.39
HMGXB4-204ENST00000455359 CARD17Q5XLA6 110 aa12.6□□□□□ -0.39
HMGXB4-204ENST00000455359 ZBTB49Q6ZSB9 765 aa12.6□□□□□ -0.39
HMGXB4-204ENST00000455359 ZNF627Q7L945 461 aa12.6□□□□□ -0.39
HMGXB4-204ENST00000455359 BHLHA15Q7RTS1 189 aaPredicted RBP12.6□□□□□ -0.39
HMGXB4-204ENST00000455359 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.6□□□□□ -0.39
HMGXB4-204ENST00000455359 CCDC36Q8IYA8 594 aa12.6□□□□□ -0.39
HMGXB4-204ENST00000455359 CBR4Q8N4T8 237 aa12.6□□□□□ -0.39
HMGXB4-204ENST00000455359 ZNF433Q8N7K0 673 aaPredicted RBP12.6□□□□□ -0.39
HMGXB4-204ENST00000455359 OR8D4Q8NGM9 314 aa12.6□□□□□ -0.39
HMGXB4-204ENST00000455359 HDAC2Q92769 488 aaKnown RBP12.6□□□□□ -0.39
HMGXB4-204ENST00000455359 ALKBH3Q96Q83 286 aaPredicted RBP12.6□□□□□ -0.39
HMGXB4-204ENST00000455359 COL12A1Q99715 3063 aa12.6□□□□□ -0.39
HMGXB4-204ENST00000455359 CIB1Q99828 191 aa12.6□□□□□ -0.39
HMGXB4-204ENST00000455359 CRLF2Q9HC73 371 aa12.6□□□□□ -0.39
HMGXB4-204ENST00000455359 MOV10Q9HCE1 1003 aaKnown RBP12.6□□□□□ -0.39
HMGXB4-204ENST00000455359 OBP2BQ9NPH6 170 aa12.6□□□□□ -0.39
HMGXB4-204ENST00000455359 ORC6Q9Y5N6 252 aa12.6□□□□□ -0.39
HMGXB4-204ENST00000455359 CIB4A0PJX0 185 aa12.59□□□□□ -0.39
HMGXB4-204ENST00000455359 ZNF99A8MXY4 864 aaPredicted RBP12.59□□□□□ -0.39
HMGXB4-204ENST00000455359 PRSS44E7EML9 344 aa12.59□□□□□ -0.39
HMGXB4-204ENST00000455359 EI24O14681 340 aa12.59□□□□□ -0.39
HMGXB4-204ENST00000455359 CASQ2O14958 399 aaPredicted RBP12.59□□□□□ -0.39
HMGXB4-204ENST00000455359 DHHO43323 396 aa12.59□□□□□ -0.39
HMGXB4-204ENST00000455359 ITGA5P08648 1049 aa12.59□□□□□ -0.39
HMGXB4-204ENST00000455359 QDPRP09417 244 aa12.59□□□□□ -0.39
HMGXB4-204ENST00000455359 GRK5P34947 590 aa12.59□□□□□ -0.39
HMGXB4-204ENST00000455359 CDK5Q00535 292 aa12.59□□□□□ -0.39
HMGXB4-204ENST00000455359 MYBPC1Q00872 1141 aa12.59□□□□□ -0.39
HMGXB4-204ENST00000455359 GINS1Q14691 196 aa12.59□□□□□ -0.39
HMGXB4-204ENST00000455359 PGGHGQ32M88 737 aa12.59□□□□□ -0.39
HMGXB4-204ENST00000455359 MESTQ5EB52 335 aa12.59□□□□□ -0.39
HMGXB4-204ENST00000455359 LRFN4Q6PJG9 635 aa12.59□□□□□ -0.39
HMGXB4-204ENST00000455359 DNM1P34Q6PK57 102 aa12.59□□□□□ -0.39
HMGXB4-204ENST00000455359 JAZF1Q86VZ6 243 aa12.59□□□□□ -0.39
HMGXB4-204ENST00000455359 PACRGLQ8N7B6 248 aa12.59□□□□□ -0.39
HMGXB4-204ENST00000455359 HSD17B8Q92506 261 aa12.59□□□□□ -0.39
HMGXB4-204ENST00000455359 MCHR2Q969V1 340 aa12.59□□□□□ -0.39
HMGXB4-204ENST00000455359 DACH2Q96NX9 599 aa12.59□□□□□ -0.39
HMGXB4-204ENST00000455359 GABARAPL3Q9BY60 117 aa12.59□□□□□ -0.39
HMGXB4-204ENST00000455359 PRRG3Q9BZD7 231 aa12.59□□□□□ -0.39
HMGXB4-204ENST00000455359 RNPEPL1Q9HAU8 725 aa12.59□□□□□ -0.39
HMGXB4-204ENST00000455359 SLC25A19Q9HC21 320 aa12.59□□□□□ -0.39
HMGXB4-204ENST00000455359 NDRG3Q9UGV2 375 aa12.59□□□□□ -0.39
HMGXB4-204ENST00000455359 TMEFF2Q9UIK5 374 aaPredicted RBP12.59□□□□□ -0.39
HMGXB4-204ENST00000455359 KLHL21Q9UJP4 597 aa12.59□□□□□ -0.39
HMGXB4-204ENST00000455359 ALPK2Q86TB3 2170 aa12.58□□□□□ -0.39
HMGXB4-204ENST00000455359 SLC22A23A1A5C7 686 aa12.58□□□□□ -0.4
HMGXB4-204ENST00000455359 CLDN1O95832 211 aa12.58□□□□□ -0.4
HMGXB4-204ENST00000455359 RENP00797 406 aa12.58□□□□□ -0.4
HMGXB4-204ENST00000455359 POU1F1P28069 291 aa12.58□□□□□ -0.4
HMGXB4-204ENST00000455359 CRABP1P29762 137 aa12.58□□□□□ -0.4
HMGXB4-204ENST00000455359 ZNF84P51523 738 aa12.58□□□□□ -0.4
HMGXB4-204ENST00000455359 SLC34A1Q06495 639 aa12.58□□□□□ -0.4
HMGXB4-204ENST00000455359 LGALS3BPQ08380 585 aa12.58□□□□□ -0.4
HMGXB4-204ENST00000455359 CD47Q08722 323 aa12.58□□□□□ -0.4
HMGXB4-204ENST00000455359 TRIP10Q15642 601 aa12.58□□□□□ -0.4
HMGXB4-204ENST00000455359 CEACAM16Q2WEN9 425 aa12.58□□□□□ -0.4
HMGXB4-204ENST00000455359 TIMM23BQ5SRD1 257 aa12.58□□□□□ -0.4
HMGXB4-204ENST00000455359 PHYHD1Q5SRE7 291 aa12.58□□□□□ -0.4
HMGXB4-204ENST00000455359 ANKRD16Q6P6B7 361 aa12.58□□□□□ -0.4
HMGXB4-204ENST00000455359 LINGO2Q7L985 606 aa12.58□□□□□ -0.4
HMGXB4-204ENST00000455359 DPPA2Q7Z7J5 298 aa12.58□□□□□ -0.4
HMGXB4-204ENST00000455359 WDFY1Q8IWB7 410 aa12.58□□□□□ -0.4
HMGXB4-204ENST00000455359 SYT14Q8NB59 555 aa12.58□□□□□ -0.4
HMGXB4-204ENST00000455359 RASD2Q96D21 266 aa12.58□□□□□ -0.4
HMGXB4-204ENST00000455359 RDH12Q96NR8 316 aa12.58□□□□□ -0.4
HMGXB4-204ENST00000455359 ACTR6Q9GZN1 396 aa12.58□□□□□ -0.4
HMGXB4-204ENST00000455359 CMC2Q9NRP2 79 aa12.58□□□□□ -0.4
HMGXB4-204ENST00000455359 PTPN13Q12923 2485 aa12.58□□□□□ -0.4
HMGXB4-204ENST00000455359 TUBAL3A6NHL2 446 aa12.57□□□□□ -0.4
HMGXB4-204ENST00000455359 OR5H1A6NKK0 313 aa12.57□□□□□ -0.4
HMGXB4-204ENST00000455359 RIIAD1A6NNX1 92 aa12.57□□□□□ -0.4
HMGXB4-204ENST00000455359 SOCS2O14508 198 aa12.57□□□□□ -0.4
HMGXB4-204ENST00000455359 LYZL6O75951 148 aa12.57□□□□□ -0.4
HMGXB4-204ENST00000455359 IGFBP1P08833 259 aaPredicted RBP12.57□□□□□ -0.4
HMGXB4-204ENST00000455359 HIST1H1CP16403 213 aaKnown RBP12.57□□□□□ -0.4
HMGXB4-204ENST00000455359 NPR2P20594 1047 aa12.57□□□□□ -0.4
HMGXB4-204ENST00000455359 CCKARP32238 428 aa12.57□□□□□ -0.4
HMGXB4-204ENST00000455359 CDKN2AP42771 156 aaKnown RBP12.57□□□□□ -0.4
HMGXB4-204ENST00000455359 GUCA1AP43080 201 aaPredicted RBP12.57□□□□□ -0.4
HMGXB4-204ENST00000455359 ARF1P84077 181 aaKnown RBP12.57□□□□□ -0.4
HMGXB4-204ENST00000455359 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.57□□□□□ -0.4
HMGXB4-204ENST00000455359 NPRL3Q12980 569 aa12.57□□□□□ -0.4
HMGXB4-204ENST00000455359 GABRA6Q16445 453 aa12.57□□□□□ -0.4
HMGXB4-204ENST00000455359 ANKRD34AQ69YU3 496 aa12.57□□□□□ -0.4
HMGXB4-204ENST00000455359 SLC25A47Q6Q0C1 308 aa12.57□□□□□ -0.4
HMGXB4-204ENST00000455359 DMRTC2Q8IXT2 367 aaPredicted RBP12.57□□□□□ -0.4
HMGXB4-204ENST00000455359 OR52E2Q8NGJ4 325 aa12.57□□□□□ -0.4
HMGXB4-204ENST00000455359 OR1K1Q8NGR3 316 aa12.57□□□□□ -0.4
HMGXB4-204ENST00000455359 OR4Q3Q8NH05 313 aa12.57□□□□□ -0.4
HMGXB4-204ENST00000455359 OR4K13Q8NH42 304 aa12.57□□□□□ -0.4
HMGXB4-204ENST00000455359 FAM222BQ8WU58 562 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms