RNA–Protein interactions for RNA: ENST00000455343.5

RBM39-220, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 441 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-220ENST00000455343 SCAMP2O15127 329 aaKnown RBP3.1□□□□□ -1.91
RBM39-220ENST00000455343 ZNF208O43345 1280 aa3.1□□□□□ -1.91
RBM39-220ENST00000455343 PPIHO43447 177 aaKnown RBP3.1□□□□□ -1.91
RBM39-220ENST00000455343 TRAF3IP2O43734 574 aaPredicted RBP3.1□□□□□ -1.91
RBM39-220ENST00000455343 FCMRO60667 390 aa3.1□□□□□ -1.91
RBM39-220ENST00000455343 SMIM24O75264 130 aa3.1□□□□□ -1.91
RBM39-220ENST00000455343 BCAS1O75363 584 aaPredicted RBP3.1□□□□□ -1.91
RBM39-220ENST00000455343 UPK3AO75631 287 aa3.1□□□□□ -1.91
RBM39-220ENST00000455343 UGT2B17O75795 530 aa3.1□□□□□ -1.91
RBM39-220ENST00000455343 RSL1D1O76021 490 aaKnown RBP3.1□□□□□ -1.91
RBM39-220ENST00000455343 CLPXO76031 633 aa3.1□□□□□ -1.91
RBM39-220ENST00000455343 SUPT7LO94864 414 aa3.1□□□□□ -1.91
RBM39-220ENST00000455343 ZNF432O94892 652 aa3.1□□□□□ -1.91
RBM39-220ENST00000455343 NGFP01138 241 aa3.1□□□□□ -1.91
RBM39-220ENST00000455343 ENO1P06733 434 aaKnown RBP3.1□□□□□ -1.91
RBM39-220ENST00000455343 GUSBP08236 651 aa3.1□□□□□ -1.91
RBM39-220ENST00000455343 UBL4AP11441 157 aa3.1□□□□□ -1.91
RBM39-220ENST00000455343 SELEP16581 610 aa3.1□□□□□ -1.91
RBM39-220ENST00000455343 CDH2P19022 906 aaPredicted RBP3.1□□□□□ -1.91
RBM39-220ENST00000455343 PTMSP20962 102 aa3.1□□□□□ -1.91
RBM39-220ENST00000455343 ATP6V1C1P21283 382 aa3.1□□□□□ -1.91
RBM39-220ENST00000455343 PRPH2P23942 346 aa3.1□□□□□ -1.91
RBM39-220ENST00000455343 STX2P32856 288 aa3.1□□□□□ -1.91
RBM39-220ENST00000455343 ARR3P36575 388 aa3.1□□□□□ -1.91
RBM39-220ENST00000455343 PGM1P36871 562 aa3.1□□□□□ -1.91
RBM39-220ENST00000455343 RBMXP38159 391 aaKnown RBP3.1□□□□□ -1.91
RBM39-220ENST00000455343 CRYBB2P43320 205 aa3.1□□□□□ -1.91
RBM39-220ENST00000455343 FOXA1P55317 472 aa3.1□□□□□ -1.91
RBM39-220ENST00000455343 LINC00205P59089 165 aa3.1□□□□□ -1.91
RBM39-220ENST00000455343 UBE2NP61088 152 aaKnown RBP3.1□□□□□ -1.91
RBM39-220ENST00000455343 TUBA1BP68363 451 aa3.1□□□□□ -1.91
RBM39-220ENST00000455343 SLC35A1P78382 337 aa3.1□□□□□ -1.91
RBM39-220ENST00000455343 BTKQ06187 659 aa3.1□□□□□ -1.91
RBM39-220ENST00000455343 BAMBIQ13145 260 aa3.1□□□□□ -1.91
RBM39-220ENST00000455343 SNTB2Q13425 540 aaKnown RBP3.1□□□□□ -1.91
RBM39-220ENST00000455343 DAG1Q14118 895 aa3.1□□□□□ -1.91
RBM39-220ENST00000455343 LASP1Q14847 261 aaKnown RBP3.1□□□□□ -1.91
RBM39-220ENST00000455343 ZNF141Q15928 474 aa3.1□□□□□ -1.91
RBM39-220ENST00000455343 MMEL1Q495T6 779 aa3.1□□□□□ -1.91
RBM39-220ENST00000455343 ATP6AP1LQ52LC2 224 aa3.1□□□□□ -1.91
RBM39-220ENST00000455343 KLHL22Q53GT1 634 aa3.1□□□□□ -1.91
RBM39-220ENST00000455343 ZNF311Q5JNZ3 666 aa3.1□□□□□ -1.91
RBM39-220ENST00000455343 VAX1Q5SQQ9 334 aa3.1□□□□□ -1.91
RBM39-220ENST00000455343 DCST2Q5T1A1 773 aa3.1□□□□□ -1.91
RBM39-220ENST00000455343 PDZK1Q5T2W1 519 aa3.1□□□□□ -1.91
RBM39-220ENST00000455343 OLFML2AQ68BL7 652 aa3.1□□□□□ -1.91
RBM39-220ENST00000455343 REP15Q6BDI9 236 aa3.1□□□□□ -1.91
RBM39-220ENST00000455343 KRT80Q6KB66 452 aa3.1□□□□□ -1.91
RBM39-220ENST00000455343 GPRIN3Q6ZVF9 776 aa3.1□□□□□ -1.91
RBM39-220ENST00000455343 CREB3L2Q70SY1 520 aa3.1□□□□□ -1.91
RBM39-220ENST00000455343 TUBA1AQ71U36 451 aa3.1□□□□□ -1.91
RBM39-220ENST00000455343 AAED1Q7RTV5 226 aa3.1□□□□□ -1.91
RBM39-220ENST00000455343 GRINAQ7Z429 371 aa3.1□□□□□ -1.91
RBM39-220ENST00000455343 ABHD12BQ7Z5M8 362 aaPredicted RBP3.1□□□□□ -1.91
RBM39-220ENST00000455343 BCDIN3DQ7Z5W3 292 aaKnown RBP3.1□□□□□ -1.91
RBM39-220ENST00000455343 ZBTB46Q86UZ6 589 aa3.1□□□□□ -1.91
RBM39-220ENST00000455343 LRP11Q86VZ4 500 aa3.1□□□□□ -1.91
RBM39-220ENST00000455343 GAS2L3Q86XJ1 694 aa3.1□□□□□ -1.91
RBM39-220ENST00000455343 EPHX4Q8IUS5 362 aa3.1□□□□□ -1.91
RBM39-220ENST00000455343 WDFY1Q8IWB7 410 aa3.1□□□□□ -1.91
RBM39-220ENST00000455343 KLHL7Q8IXQ5 586 aa3.1□□□□□ -1.91
RBM39-220ENST00000455343 CCDC36Q8IYA8 594 aa3.1□□□□□ -1.91
RBM39-220ENST00000455343 KIR3DL3Q8N743 410 aa3.1□□□□□ -1.91
RBM39-220ENST00000455343 OR9K2Q8NGE7 335 aa3.1□□□□□ -1.91
RBM39-220ENST00000455343 RFWD2Q8NHY2 731 aa3.1□□□□□ -1.91
RBM39-220ENST00000455343 OIT3Q8WWZ8 545 aa3.1□□□□□ -1.91
RBM39-220ENST00000455343 CIDECQ96AQ7 238 aaPredicted RBP3.1□□□□□ -1.91
RBM39-220ENST00000455343 RAB39BQ96DA2 213 aa3.1□□□□□ -1.91
RBM39-220ENST00000455343 AURKBQ96GD4 344 aaPredicted RBP3.1□□□□□ -1.91
RBM39-220ENST00000455343 FCRL1Q96LA6 429 aa3.1□□□□□ -1.91
RBM39-220ENST00000455343 ALKBH3Q96Q83 286 aaPredicted RBP3.1□□□□□ -1.91
RBM39-220ENST00000455343 FYTTD1Q96QD9 318 aaKnown RBP3.1□□□□□ -1.91
RBM39-220ENST00000455343 KCNA7Q96RP8 456 aa3.1□□□□□ -1.91
RBM39-220ENST00000455343 CCT8L2Q96SF2 557 aa3.1□□□□□ -1.91
RBM39-220ENST00000455343 SDF2Q99470 211 aa3.1□□□□□ -1.91
RBM39-220ENST00000455343 MRPL57Q9BQC6 102 aaKnown RBP3.1□□□□□ -1.91
RBM39-220ENST00000455343 LINC00470Q9BZP3 86 aa3.1□□□□□ -1.91
RBM39-220ENST00000455343 TRIM31Q9BZY9 425 aa3.1□□□□□ -1.91
RBM39-220ENST00000455343 OR11A1Q9GZK7 315 aa3.1□□□□□ -1.91
RBM39-220ENST00000455343 REEP4Q9H6H4 257 aa3.1□□□□□ -1.91
RBM39-220ENST00000455343 BEX1Q9HBH7 125 aa3.1□□□□□ -1.91
RBM39-220ENST00000455343 CRLF2Q9HC73 371 aa3.1□□□□□ -1.91
RBM39-220ENST00000455343 TCF7L1Q9HCS4 588 aa3.1□□□□□ -1.91
RBM39-220ENST00000455343 MMP26Q9NRE1 261 aa3.1□□□□□ -1.91
RBM39-220ENST00000455343 ZCCHC3Q9NUD5 404 aaKnown RBP3.1□□□□□ -1.91
RBM39-220ENST00000455343 ASIC5Q9NY37 505 aa3.1□□□□□ -1.91
RBM39-220ENST00000455343 B3GNT2Q9NY97 397 aa3.1□□□□□ -1.91
RBM39-220ENST00000455343 NKIRAS2Q9NYR9 191 aa3.1□□□□□ -1.91
RBM39-220ENST00000455343 MYEF2Q9P2K5 600 aaKnown RBP3.1□□□□□ -1.91
RBM39-220ENST00000455343 LEF1Q9UJU2 399 aaPredicted RBP3.1□□□□□ -1.91
RBM39-220ENST00000455343 MID2Q9UJV3 735 aa3.1□□□□□ -1.91
RBM39-220ENST00000455343 ZNF580Q9UK33 172 aa3.1□□□□□ -1.91
RBM39-220ENST00000455343 PCDHGB4Q9UN71 923 aa3.1□□□□□ -1.91
RBM39-220ENST00000455343 PPP2R2CQ9Y2T4 447 aa3.1□□□□□ -1.91
RBM39-220ENST00000455343 WIPI2Q9Y4P8 454 aa3.1□□□□□ -1.91
RBM39-220ENST00000455343 POLR3HQ9Y535 204 aaPredicted RBP3.1□□□□□ -1.91
RBM39-220ENST00000455343 TIMM22Q9Y584 194 aa3.1□□□□□ -1.91
RBM39-220ENST00000455343 SPIN1Q9Y657 262 aaPredicted RBP3.1□□□□□ -1.91
RBM39-220ENST00000455343 DSPPQ9NZW4 1301 aa3.1□□□□□ -1.91
RBM39-220ENST00000455343 TMEM72A0PK05 275 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms