RNA–Protein interactions for RNA: ENST00000454398.1

HLA-DPA3-207, Transcript of major histocompatibility complex, class II, DP alpha 3 (pseudogene), humanhuman

BASIC

Gene HLA-DPA3, Length 229 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA3-207ENST00000454398 PLPP3O14495 311 aa5.08□□□□□ -1.6
HLA-DPA3-207ENST00000454398 BIRC5O15392 142 aa5.08□□□□□ -1.6
HLA-DPA3-207ENST00000454398 HNRNPCL1O60812 293 aaKnown RBP5.08□□□□□ -1.6
HLA-DPA3-207ENST00000454398 SLC22A3O75751 556 aa5.08□□□□□ -1.6
HLA-DPA3-207ENST00000454398 UBL3O95164 117 aa5.08□□□□□ -1.6
HLA-DPA3-207ENST00000454398 ZNF205O95201 554 aa5.08□□□□□ -1.6
HLA-DPA3-207ENST00000454398 CH25HO95992 272 aa5.08□□□□□ -1.6
HLA-DPA3-207ENST00000454398 IGHV1-46P01743 117 aa5.08□□□□□ -1.6
HLA-DPA3-207ENST00000454398 THY1P04216 161 aa5.08□□□□□ -1.6
HLA-DPA3-207ENST00000454398 SERPINA5P05154 406 aa5.08□□□□□ -1.6
HLA-DPA3-207ENST00000454398 HNRNPCL4P0DMR1 293 aa5.08□□□□□ -1.6
HLA-DPA3-207ENST00000454398 IDO1P14902 403 aa5.08□□□□□ -1.6
HLA-DPA3-207ENST00000454398 TNFRSF1BP20333 461 aa5.08□□□□□ -1.6
HLA-DPA3-207ENST00000454398 MDKP21741 143 aaPredicted RBP5.08□□□□□ -1.6
HLA-DPA3-207ENST00000454398 PRKAR1BP31321 381 aa5.08□□□□□ -1.6
HLA-DPA3-207ENST00000454398 LSP1P33241 339 aa5.08□□□□□ -1.6
HLA-DPA3-207ENST00000454398 POLR2JP52435 117 aaKnown RBP5.08□□□□□ -1.6
HLA-DPA3-207ENST00000454398 WDR4P57081 412 aaKnown RBP5.08□□□□□ -1.6
HLA-DPA3-207ENST00000454398 HOXA4Q00056 320 aaPredicted RBP5.08□□□□□ -1.6
HLA-DPA3-207ENST00000454398 TOP3AQ13472 1001 aaPredicted RBP5.08□□□□□ -1.6
HLA-DPA3-207ENST00000454398 RGNQ15493 299 aa5.08□□□□□ -1.6
HLA-DPA3-207ENST00000454398 OR1Q1Q15612 314 aa5.08□□□□□ -1.6
HLA-DPA3-207ENST00000454398 PDCD4Q53EL6 469 aaKnown RBP5.08□□□□□ -1.6
HLA-DPA3-207ENST00000454398 ARMCX4Q5H9R4 360 aa5.08□□□□□ -1.6
HLA-DPA3-207ENST00000454398 KLF17Q5JT82 389 aaPredicted RBP5.08□□□□□ -1.6
HLA-DPA3-207ENST00000454398 ACSM5Q6NUN0 579 aa5.08□□□□□ -1.6
HLA-DPA3-207ENST00000454398 LRFN4Q6PJG9 635 aa5.08□□□□□ -1.6
HLA-DPA3-207ENST00000454398 TREML4Q6UXN2 200 aa5.08□□□□□ -1.6
HLA-DPA3-207ENST00000454398 RBM45Q8IUH3 476 aaKnown RBP5.08□□□□□ -1.6
HLA-DPA3-207ENST00000454398 EIF1ADQ8N9N8 165 aaKnown RBP5.08□□□□□ -1.6
HLA-DPA3-207ENST00000454398 ADPRHL1Q8NDY3 354 aa5.08□□□□□ -1.6
HLA-DPA3-207ENST00000454398 DEFB108BQ8NET1 73 aa5.08□□□□□ -1.6
HLA-DPA3-207ENST00000454398 NOXO1Q8NFA2 376 aa5.08□□□□□ -1.6
HLA-DPA3-207ENST00000454398 ANKK1Q8NFD2 765 aa5.08□□□□□ -1.6
HLA-DPA3-207ENST00000454398 OR4D11Q8NGI4 311 aa5.08□□□□□ -1.6
HLA-DPA3-207ENST00000454398 AKR7LQ8NHP1 331 aa5.08□□□□□ -1.6
HLA-DPA3-207ENST00000454398 PFN4Q8NHR9 129 aa5.08□□□□□ -1.6
HLA-DPA3-207ENST00000454398 SYNPRQ8TBG9 265 aa5.08□□□□□ -1.6
HLA-DPA3-207ENST00000454398 CCL17Q92583 94 aa5.08□□□□□ -1.6
HLA-DPA3-207ENST00000454398 GTF2H4Q92759 462 aa5.08□□□□□ -1.6
HLA-DPA3-207ENST00000454398 DVL3Q92997 716 aaPredicted RBP5.08□□□□□ -1.6
HLA-DPA3-207ENST00000454398 RAB39BQ96DA2 213 aa5.08□□□□□ -1.6
HLA-DPA3-207ENST00000454398 SLC41A3Q96GZ6 507 aa5.08□□□□□ -1.6
HLA-DPA3-207ENST00000454398 ITCHQ96J02 903 aa5.08□□□□□ -1.6
HLA-DPA3-207ENST00000454398 DCLRE1CQ96SD1 692 aaKnown RBP5.08□□□□□ -1.6
HLA-DPA3-207ENST00000454398 MS4A5Q9H3V2 200 aa5.08□□□□□ -1.6
HLA-DPA3-207ENST00000454398 POFUT1Q9H488 388 aa5.08□□□□□ -1.6
HLA-DPA3-207ENST00000454398 C7orf69Q9H7B7 122 aa5.08□□□□□ -1.6
HLA-DPA3-207ENST00000454398 RNF121Q9H920 327 aa5.08□□□□□ -1.6
HLA-DPA3-207ENST00000454398 MOV10Q9HCE1 1003 aaKnown RBP5.08□□□□□ -1.6
HLA-DPA3-207ENST00000454398 MSL2Q9HCI7 577 aa5.08□□□□□ -1.6
HLA-DPA3-207ENST00000454398 B3GAT2Q9NPZ5 323 aa5.08□□□□□ -1.6
HLA-DPA3-207ENST00000454398 SDR39U1Q9NRG7 319 aaPredicted RBP5.08□□□□□ -1.6
HLA-DPA3-207ENST00000454398 MRPL39Q9NYK5 338 aaKnown RBP5.08□□□□□ -1.6
HLA-DPA3-207ENST00000454398 TESQ9UGI8 421 aaKnown RBP5.08□□□□□ -1.6
HLA-DPA3-207ENST00000454398 ZNF346Q9UL40 294 aaKnown RBP5.08□□□□□ -1.6
HLA-DPA3-207ENST00000454398 RYR3Q15413 4870 aa5.07□□□□□ -1.6
HLA-DPA3-207ENST00000454398 IGLV3-9A0A075B6K5 115 aa5.07□□□□□ -1.6
HLA-DPA3-207ENST00000454398 TRAV40A0A0B4J280 105 aa5.07□□□□□ -1.6
HLA-DPA3-207ENST00000454398 TMEM120BA0PK00 339 aa5.07□□□□□ -1.6
HLA-DPA3-207ENST00000454398 TM9SF1O15321 606 aa5.07□□□□□ -1.6
HLA-DPA3-207ENST00000454398 HDAC3O15379 428 aa5.07□□□□□ -1.6
HLA-DPA3-207ENST00000454398 RNF13O43567 381 aa5.07□□□□□ -1.6
HLA-DPA3-207ENST00000454398 OR2T1O43869 369 aa5.07□□□□□ -1.6
HLA-DPA3-207ENST00000454398 PIP5K1CO60331 668 aa5.07□□□□□ -1.6
HLA-DPA3-207ENST00000454398 SHOX2O60902 331 aaPredicted RBP5.07□□□□□ -1.6
HLA-DPA3-207ENST00000454398 SNNO75324 88 aaPredicted RBP5.07□□□□□ -1.6
HLA-DPA3-207ENST00000454398 GPANK1O95872 356 aa5.07□□□□□ -1.6
HLA-DPA3-207ENST00000454398 BCL10O95999 233 aa5.07□□□□□ -1.6
HLA-DPA3-207ENST00000454398 F13BP05160 661 aa5.07□□□□□ -1.6
HLA-DPA3-207ENST00000454398 IL6P05231 212 aa5.07□□□□□ -1.6
HLA-DPA3-207ENST00000454398 QDPRP09417 244 aa5.07□□□□□ -1.6
HLA-DPA3-207ENST00000454398 ZCCHC18P0CG32 403 aa5.07□□□□□ -1.6
HLA-DPA3-207ENST00000454398 PGA4P0DJD7 388 aa5.07□□□□□ -1.6
HLA-DPA3-207ENST00000454398 PGA3P0DJD8 388 aa5.07□□□□□ -1.6
HLA-DPA3-207ENST00000454398 IGHV4-38-2P0DP08 117 aa5.07□□□□□ -1.6
HLA-DPA3-207ENST00000454398 THRBP10828 461 aa5.07□□□□□ -1.6
HLA-DPA3-207ENST00000454398 UMPSP11172 480 aa5.07□□□□□ -1.6
HLA-DPA3-207ENST00000454398 HOXB1P14653 301 aaPredicted RBP5.07□□□□□ -1.6
HLA-DPA3-207ENST00000454398 FUT1P19526 365 aa5.07□□□□□ -1.6
HLA-DPA3-207ENST00000454398 DRD4P21917 467 aa5.07□□□□□ -1.6
HLA-DPA3-207ENST00000454398 PCGF2P35227 344 aa5.07□□□□□ -1.6
HLA-DPA3-207ENST00000454398 EVX1P49640 407 aa5.07□□□□□ -1.6
HLA-DPA3-207ENST00000454398 ERFP50548 548 aa5.07□□□□□ -1.6
HLA-DPA3-207ENST00000454398 ZNF81P51508 661 aa5.07□□□□□ -1.6
HLA-DPA3-207ENST00000454398 PRSS12P56730 875 aa5.07□□□□□ -1.6
HLA-DPA3-207ENST00000454398 TMEM33P57088 247 aa5.07□□□□□ -1.6
HLA-DPA3-207ENST00000454398 MTPNP58546 118 aa5.07□□□□□ -1.6
HLA-DPA3-207ENST00000454398 ERVK-25P63136 954 aa5.07□□□□□ -1.6
HLA-DPA3-207ENST00000454398 CDK6Q00534 326 aa5.07□□□□□ -1.6
HLA-DPA3-207ENST00000454398 HSF2Q03933 536 aa5.07□□□□□ -1.6
HLA-DPA3-207ENST00000454398 SCGB2A2Q13296 93 aa5.07□□□□□ -1.6
HLA-DPA3-207ENST00000454398 SCARB2Q14108 478 aa5.07□□□□□ -1.6
HLA-DPA3-207ENST00000454398 SELPLGQ14242 412 aa5.07□□□□□ -1.6
HLA-DPA3-207ENST00000454398 ZNF74Q16587 644 aa5.07□□□□□ -1.6
HLA-DPA3-207ENST00000454398 TBC1D28Q2M2D7 210 aa5.07□□□□□ -1.6
HLA-DPA3-207ENST00000454398 PABPC1L2AQ5JQF8 200 aa5.07□□□□□ -1.6
HLA-DPA3-207ENST00000454398 PAGE3Q5JUK9 113 aa5.07□□□□□ -1.6
HLA-DPA3-207ENST00000454398 THEM4Q5T1C6 240 aa5.07□□□□□ -1.6
HLA-DPA3-207ENST00000454398 C1QTNF12Q5T7M4 302 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms