RNA–Protein interactions for RNA: ENST00000453796.1

HSPG2-207, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 621 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-207ENST00000453796 MS4A3Q96HJ5 214 aa12.62□□□□□ -0.39
HSPG2-207ENST00000453796 LRRC37BQ96QE4 947 aa12.62□□□□□ -0.39
HSPG2-207ENST00000453796 ZNF347Q96SE7 839 aa12.62□□□□□ -0.39
HSPG2-207ENST00000453796 ANKRD19PQ9H560 264 aa12.62□□□□□ -0.39
HSPG2-207ENST00000453796 DENND2DQ9H6A0 471 aaPredicted RBP12.62□□□□□ -0.39
HSPG2-207ENST00000453796 GORASP2Q9H8Y8 452 aa12.62□□□□□ -0.39
HSPG2-207ENST00000453796 TMEM38BQ9NVV0 291 aa12.62□□□□□ -0.39
HSPG2-207ENST00000453796 ADA2Q9NZK5 511 aa12.62□□□□□ -0.39
HSPG2-207ENST00000453796 CD300AQ9UGN4 299 aa12.62□□□□□ -0.39
HSPG2-207ENST00000453796 TAGLN3Q9UI15 199 aa12.62□□□□□ -0.39
HSPG2-207ENST00000453796 RPS6KA6Q9UK32 745 aa12.62□□□□□ -0.39
HSPG2-207ENST00000453796 FN1P02751 2386 aaKnown RBP12.61□□□□□ -0.39
HSPG2-207ENST00000453796 NIPBLQ6KC79 2804 aaeCLIP12.61□□□□□ -0.39
HSPG2-207ENST00000453796 DYNC1I1O14576 645 aa12.61□□□□□ -0.39
HSPG2-207ENST00000453796 DCTN3O75935 186 aa12.61□□□□□ -0.39
HSPG2-207ENST00000453796 IGHMP01871 453 aa12.61□□□□□ -0.39
HSPG2-207ENST00000453796 CD79AP11912 226 aa12.61□□□□□ -0.39
HSPG2-207ENST00000453796 DAP3P51398 398 aaKnown RBP12.61□□□□□ -0.39
HSPG2-207ENST00000453796 CLRN1P58418 232 aa12.61□□□□□ -0.39
HSPG2-207ENST00000453796 MYBPC1Q00872 1141 aa12.61□□□□□ -0.39
HSPG2-207ENST00000453796 CHRNB3Q05901 458 aa12.61□□□□□ -0.39
HSPG2-207ENST00000453796 KRTAP1-1Q07627 177 aa12.61□□□□□ -0.39
HSPG2-207ENST00000453796 EFNB3Q15768 340 aa12.61□□□□□ -0.39
HSPG2-207ENST00000453796 C10orf128Q5T292 105 aa12.61□□□□□ -0.39
HSPG2-207ENST00000453796 TBPL2Q6SJ96 375 aa12.61□□□□□ -0.39
HSPG2-207ENST00000453796 Q71RC1 249 aaPredicted RBP12.61□□□□□ -0.39
HSPG2-207ENST00000453796 HDDC2Q7Z4H3 204 aa12.61□□□□□ -0.39
HSPG2-207ENST00000453796 MEX3DQ86XN8 651 aaKnown RBP12.61□□□□□ -0.39
HSPG2-207ENST00000453796 SLC22A24Q8N4F4 322 aa12.61□□□□□ -0.39
HSPG2-207ENST00000453796 FAM156AQ8NDB6 213 aa12.61□□□□□ -0.39
HSPG2-207ENST00000453796 IL17RDQ8NFM7 739 aa12.61□□□□□ -0.39
HSPG2-207ENST00000453796 NANOS1Q8WY41 292 aaKnown RBP12.61□□□□□ -0.39
HSPG2-207ENST00000453796 HDAC2Q92769 488 aaKnown RBP12.61□□□□□ -0.39
HSPG2-207ENST00000453796 FBXO17Q96EF6 278 aa12.61□□□□□ -0.39
HSPG2-207ENST00000453796 KCNK17Q96T54 332 aa12.61□□□□□ -0.39
HSPG2-207ENST00000453796 TXNIPQ9H3M7 391 aa12.61□□□□□ -0.39
HSPG2-207ENST00000453796 ZNF442Q9H7R0 627 aa12.61□□□□□ -0.39
HSPG2-207ENST00000453796 NMNAT1Q9HAN9 279 aaPredicted RBP12.61□□□□□ -0.39
HSPG2-207ENST00000453796 NDUFAF4Q9P032 175 aa12.61□□□□□ -0.39
HSPG2-207ENST00000453796 TLN2Q9Y4G6 2542 aa12.61□□□□□ -0.39
HSPG2-207ENST00000453796 A0A096LNT2 108 aa12.6□□□□□ -0.39
HSPG2-207ENST00000453796 IGKV1D-43A0A0B4J1Z2 117 aa12.6□□□□□ -0.39
HSPG2-207ENST00000453796 MCIDASD6RGH6 385 aa12.6□□□□□ -0.39
HSPG2-207ENST00000453796 RNF223E7ERA6 249 aa12.6□□□□□ -0.39
HSPG2-207ENST00000453796 CDC42EP2O14613 210 aa12.6□□□□□ -0.39
HSPG2-207ENST00000453796 SSX4O60224 188 aa12.6□□□□□ -0.39
HSPG2-207ENST00000453796 UBL3O95164 117 aa12.6□□□□□ -0.39
HSPG2-207ENST00000453796 SEMG1P04279 462 aa12.6□□□□□ -0.39
HSPG2-207ENST00000453796 OR8G3PP0DMU2 310 aa12.6□□□□□ -0.39
HSPG2-207ENST00000453796 ZNF35P13682 527 aa12.6□□□□□ -0.39
HSPG2-207ENST00000453796 RAB1AP62820 205 aa12.6□□□□□ -0.39
HSPG2-207ENST00000453796 VLDLRP98155 873 aa12.6□□□□□ -0.39
HSPG2-207ENST00000453796 PIGFQ07326 219 aa12.6□□□□□ -0.39
HSPG2-207ENST00000453796 RAB35Q15286 201 aa12.6□□□□□ -0.39
HSPG2-207ENST00000453796 TAF11Q15544 211 aa12.6□□□□□ -0.39
HSPG2-207ENST00000453796 ANKDD1AQ495B1 522 aa12.6□□□□□ -0.39
HSPG2-207ENST00000453796 NRN1LQ496H8 165 aa12.6□□□□□ -0.39
HSPG2-207ENST00000453796 ALG10Q5BKT4 473 aa12.6□□□□□ -0.39
HSPG2-207ENST00000453796 TMPRSS11FQ6ZWK6 438 aa12.6□□□□□ -0.39
HSPG2-207ENST00000453796 MBOAT2Q6ZWT7 520 aa12.6□□□□□ -0.39
HSPG2-207ENST00000453796 ZNF584Q8IVC4 421 aa12.6□□□□□ -0.39
HSPG2-207ENST00000453796 SYT14Q8NB59 555 aa12.6□□□□□ -0.39
HSPG2-207ENST00000453796 OR10H5Q8NGA6 315 aa12.6□□□□□ -0.39
HSPG2-207ENST00000453796 SLC7A13Q8TCU3 470 aa12.6□□□□□ -0.39
HSPG2-207ENST00000453796 HTRA1Q92743 480 aa12.6□□□□□ -0.39
HSPG2-207ENST00000453796 POM121Q96HA1 1249 aa12.6□□□□□ -0.39
HSPG2-207ENST00000453796 DHRS1Q96LJ7 313 aa12.6□□□□□ -0.39
HSPG2-207ENST00000453796 REG4Q9BYZ8 158 aa12.6□□□□□ -0.39
HSPG2-207ENST00000453796 PLK3Q9H4B4 646 aa12.6□□□□□ -0.39
HSPG2-207ENST00000453796 STX18Q9P2W9 335 aaKnown RBP12.6□□□□□ -0.39
HSPG2-207ENST00000453796 SAMD4AQ9UPU9 718 aaKnown RBP12.6□□□□□ -0.39
HSPG2-207ENST00000453796 PMF1-BGLAPU3KQ54 211 aa12.6□□□□□ -0.39
HSPG2-207ENST00000453796 ABCA1O95477 2261 aa12.59□□□□□ -0.39
HSPG2-207ENST00000453796 TRAV27A0A087WT01 109 aa12.59□□□□□ -0.39
HSPG2-207ENST00000453796 A0A1W2PRQ8 180 aa12.59□□□□□ -0.39
HSPG2-207ENST00000453796 TMEM129A0AVI4 362 aa12.59□□□□□ -0.39
HSPG2-207ENST00000453796 B9A039 149 aa12.59□□□□□ -0.39
HSPG2-207ENST00000453796 OR4A8P0C604 315 aa12.59□□□□□ -0.39
HSPG2-207ENST00000453796 PATE4P0C8F1 98 aa12.59□□□□□ -0.39
HSPG2-207ENST00000453796 SAGP10523 405 aaPredicted RBP12.59□□□□□ -0.39
HSPG2-207ENST00000453796 ZNF26P17031 533 aaPredicted RBP12.59□□□□□ -0.39
HSPG2-207ENST00000453796 RHCEP18577 417 aa12.59□□□□□ -0.39
HSPG2-207ENST00000453796 TCN1P20061 433 aaPredicted RBP12.59□□□□□ -0.39
HSPG2-207ENST00000453796 NR4A1P22736 598 aa12.59□□□□□ -0.39
HSPG2-207ENST00000453796 THBS4P35443 961 aa12.59□□□□□ -0.39
HSPG2-207ENST00000453796 SERPINF1P36955 418 aa12.59□□□□□ -0.39
HSPG2-207ENST00000453796 GIPRP48546 466 aa12.59□□□□□ -0.39
HSPG2-207ENST00000453796 PTDSS1P48651 473 aaKnown RBP12.59□□□□□ -0.39
HSPG2-207ENST00000453796 SLC9A3P48764 834 aa12.59□□□□□ -0.39
HSPG2-207ENST00000453796 NUDT6P53370 316 aa12.59□□□□□ -0.39
HSPG2-207ENST00000453796 CTXN1P60606 82 aa12.59□□□□□ -0.39
HSPG2-207ENST00000453796 RPL27P61353 136 aaKnown RBP12.59□□□□□ -0.39
HSPG2-207ENST00000453796 DGCR6Q14129 220 aa12.59□□□□□ -0.39
HSPG2-207ENST00000453796 VHLLQ6RSH7 139 aa12.59□□□□□ -0.39
HSPG2-207ENST00000453796 ZNF730Q6ZMV8 503 aa12.59□□□□□ -0.39
HSPG2-207ENST00000453796 OAFQ86UD1 273 aa12.59□□□□□ -0.39
HSPG2-207ENST00000453796 CYP4Z1Q86W10 505 aa12.59□□□□□ -0.39
HSPG2-207ENST00000453796 FITM2Q8N6M3 262 aa12.59□□□□□ -0.39
HSPG2-207ENST00000453796 OR4K5Q8NGD3 323 aa12.59□□□□□ -0.39
HSPG2-207ENST00000453796 ZNF519Q8TB69 540 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms