RNA–Protein interactions for RNA: ENST00000453441.1

COL28A1-205, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

TSL 2

Gene COL28A1, Length 700 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-205ENST00000453441 CCDC36Q8IYA8 594 aa7.68□□□□□ -1.18
COL28A1-205ENST00000453441 C20orf196Q8IYI0 205 aa7.68□□□□□ -1.18
COL28A1-205ENST00000453441 KDM8Q8N371 416 aa7.68□□□□□ -1.18
COL28A1-205ENST00000453441 ARIH2OSQ8N7S6 290 aa7.68□□□□□ -1.18
COL28A1-205ENST00000453441 ATG16L2Q8NAA4 619 aa7.68□□□□□ -1.18
COL28A1-205ENST00000453441 LRRC75AQ8NAA5 344 aa7.68□□□□□ -1.18
COL28A1-205ENST00000453441 OR9Q2Q8NGE9 314 aa7.68□□□□□ -1.18
COL28A1-205ENST00000453441 MOSPD2Q8NHP6 518 aa7.68□□□□□ -1.18
COL28A1-205ENST00000453441 FAM222BQ8WU58 562 aa7.68□□□□□ -1.18
COL28A1-205ENST00000453441 PYDC1Q8WXC3 89 aa7.68□□□□□ -1.18
COL28A1-205ENST00000453441 ASB10Q8WXI3 467 aa7.68□□□□□ -1.18
COL28A1-205ENST00000453441 TMEM54Q969K7 222 aa7.68□□□□□ -1.18
COL28A1-205ENST00000453441 DACH2Q96NX9 599 aa7.68□□□□□ -1.18
COL28A1-205ENST00000453441 TEX12Q9BXU0 123 aa7.68□□□□□ -1.18
COL28A1-205ENST00000453441 GABARAPL1Q9H0R8 117 aa7.68□□□□□ -1.18
COL28A1-205ENST00000453441 OR52D1Q9H346 318 aa7.68□□□□□ -1.18
COL28A1-205ENST00000453441 MCCC2Q9HCC0 563 aa7.68□□□□□ -1.18
COL28A1-205ENST00000453441 S100A14Q9HCY8 104 aa7.68□□□□□ -1.18
COL28A1-205ENST00000453441 NRIP3Q9NQ35 241 aa7.68□□□□□ -1.18
COL28A1-205ENST00000453441 SLC7A10Q9NS82 523 aa7.68□□□□□ -1.18
COL28A1-205ENST00000453441 MED29Q9NX70 200 aa7.68□□□□□ -1.18
COL28A1-205ENST00000453441 IL20Q9NYY1 176 aa7.68□□□□□ -1.18
COL28A1-205ENST00000453441 GLTPQ9NZD2 209 aa7.68□□□□□ -1.18
COL28A1-205ENST00000453441 PDP1Q9P0J1 537 aaPredicted RBP7.68□□□□□ -1.18
COL28A1-205ENST00000453441 KIF17Q9P2E2 1029 aa7.68□□□□□ -1.18
COL28A1-205ENST00000453441 GRHPRQ9UBQ7 328 aa7.68□□□□□ -1.18
COL28A1-205ENST00000453441 PLEKHB1Q9UF11 243 aaPredicted RBP7.68□□□□□ -1.18
COL28A1-205ENST00000453441 KCNN3Q9UGI6 736 aa7.68□□□□□ -1.18
COL28A1-205ENST00000453441 MAGED1Q9Y5V3 778 aaPredicted RBP7.68□□□□□ -1.18
COL28A1-205ENST00000453441 ALPK2Q86TB3 2170 aa7.68□□□□□ -1.18
COL28A1-205ENST00000453441 BAHCC1Q9P281 2608 aa7.68□□□□□ -1.18
COL28A1-205ENST00000453441 COL12A1Q99715 3063 aa7.68□□□□□ -1.18
COL28A1-205ENST00000453441 PKDREJQ9NTG1 2253 aa7.67□□□□□ -1.18
COL28A1-205ENST00000453441 TUBAL3A6NHL2 446 aa7.67□□□□□ -1.18
COL28A1-205ENST00000453441 SERPINI2O75830 405 aa7.67□□□□□ -1.18
COL28A1-205ENST00000453441 CLDN1O95832 211 aa7.67□□□□□ -1.18
COL28A1-205ENST00000453441 GASTP01350 101 aa7.67□□□□□ -1.18
COL28A1-205ENST00000453441 F13BP05160 661 aa7.67□□□□□ -1.18
COL28A1-205ENST00000453441 PGA4P0DJD7 388 aa7.67□□□□□ -1.18
COL28A1-205ENST00000453441 PGA3P0DJD8 388 aa7.67□□□□□ -1.18
COL28A1-205ENST00000453441 COX6B1P14854 86 aa7.67□□□□□ -1.18
COL28A1-205ENST00000453441 ACADSP16219 412 aa7.67□□□□□ -1.18
COL28A1-205ENST00000453441 ZNF23P17027 643 aa7.67□□□□□ -1.18
COL28A1-205ENST00000453441 SDHAP31040 664 aa7.67□□□□□ -1.18
COL28A1-205ENST00000453441 HOXC12P31275 282 aa7.67□□□□□ -1.18
COL28A1-205ENST00000453441 NTF4P34130 210 aa7.67□□□□□ -1.18
COL28A1-205ENST00000453441 ERFP50548 548 aa7.67□□□□□ -1.18
COL28A1-205ENST00000453441 ZNF133P52736 654 aaPredicted RBP7.67□□□□□ -1.18
COL28A1-205ENST00000453441 CLRN1P58418 232 aa7.67□□□□□ -1.18
COL28A1-205ENST00000453441 FAPQ12884 760 aa7.67□□□□□ -1.18
COL28A1-205ENST00000453441 TIMM23BQ5SRD1 257 aa7.67□□□□□ -1.18
COL28A1-205ENST00000453441 TSPO2Q5TGU0 170 aa7.67□□□□□ -1.18
COL28A1-205ENST00000453441 FDX2Q6P4F2 183 aa7.67□□□□□ -1.18
COL28A1-205ENST00000453441 FAHD1Q6P587 224 aa7.67□□□□□ -1.18
COL28A1-205ENST00000453441 STAC2Q6ZMT1 411 aa7.67□□□□□ -1.18
COL28A1-205ENST00000453441 ZNF627Q7L945 461 aa7.67□□□□□ -1.18
COL28A1-205ENST00000453441 BHLHA15Q7RTS1 189 aaPredicted RBP7.67□□□□□ -1.18
COL28A1-205ENST00000453441 DPPA2Q7Z7J5 298 aa7.67□□□□□ -1.18
COL28A1-205ENST00000453441 CXorf67Q86X51 503 aaPredicted RBP7.67□□□□□ -1.18
COL28A1-205ENST00000453441 PARP8Q8N3A8 854 aa7.67□□□□□ -1.18
COL28A1-205ENST00000453441 NOXO1Q8NFA2 376 aa7.67□□□□□ -1.18
COL28A1-205ENST00000453441 ZNF519Q8TB69 540 aa7.67□□□□□ -1.18
COL28A1-205ENST00000453441 MAGEE2Q8TD90 523 aaPredicted RBP7.67□□□□□ -1.18
COL28A1-205ENST00000453441 HSD17B8Q92506 261 aa7.67□□□□□ -1.18
COL28A1-205ENST00000453441 TXNDC15Q96J42 360 aa7.67□□□□□ -1.18
COL28A1-205ENST00000453441 ZNF570Q96NI8 536 aa7.67□□□□□ -1.18
COL28A1-205ENST00000453441 RBP7Q96R05 134 aa7.67□□□□□ -1.18
COL28A1-205ENST00000453441 FEVQ99581 238 aa7.67□□□□□ -1.18
COL28A1-205ENST00000453441 KATNB1Q9BVA0 655 aa7.67□□□□□ -1.18
COL28A1-205ENST00000453441 TMPRSS13Q9BYE2 586 aa7.67□□□□□ -1.18
COL28A1-205ENST00000453441 ULBP2Q9BZM5 246 aa7.67□□□□□ -1.18
COL28A1-205ENST00000453441 NTN4Q9HB63 628 aa7.67□□□□□ -1.18
COL28A1-205ENST00000453441 NGBQ9NPG2 151 aa7.67□□□□□ -1.18
COL28A1-205ENST00000453441 C8orf4Q9NR00 106 aa7.67□□□□□ -1.18
COL28A1-205ENST00000453441 VNN3Q9NY84 501 aa7.67□□□□□ -1.18
COL28A1-205ENST00000453441 ZNF226Q9NYT6 803 aa7.67□□□□□ -1.18
COL28A1-205ENST00000453441 PRSS50Q9UI38 385 aa7.67□□□□□ -1.18
COL28A1-205ENST00000453441 POFUT2Q9Y2G5 429 aa7.67□□□□□ -1.18
COL28A1-205ENST00000453441 AMDHD2Q9Y303 409 aa7.67□□□□□ -1.18
COL28A1-205ENST00000453441 LOC100289279A0A1B0GTE1 492 aa7.66□□□□□ -1.18
COL28A1-205ENST00000453441 TMEM238LA0A1B0GVL6 79 aa7.66□□□□□ -1.18
COL28A1-205ENST00000453441 CIB4A0PJX0 185 aa7.66□□□□□ -1.18
COL28A1-205ENST00000453441 A1L4Q6 167 aa7.66□□□□□ -1.18
COL28A1-205ENST00000453441 ERICH4A6NGS2 130 aa7.66□□□□□ -1.18
COL28A1-205ENST00000453441 ZNF99A8MXY4 864 aaPredicted RBP7.66□□□□□ -1.18
COL28A1-205ENST00000453441 H3BNX3 289 aa7.66□□□□□ -1.18
COL28A1-205ENST00000453441 CASKO14936 926 aa7.66□□□□□ -1.18
COL28A1-205ENST00000453441 TRMUO75648 421 aaKnown RBP7.66□□□□□ -1.18
COL28A1-205ENST00000453441 OSMP13725 252 aa7.66□□□□□ -1.18
COL28A1-205ENST00000453441 CDH2P19022 906 aaPredicted RBP7.66□□□□□ -1.18
COL28A1-205ENST00000453441 IGHV1-2P23083 117 aa7.66□□□□□ -1.18
COL28A1-205ENST00000453441 ACVR1BP36896 505 aa7.66□□□□□ -1.18
COL28A1-205ENST00000453441 KIR2DL3P43628 341 aa7.66□□□□□ -1.18
COL28A1-205ENST00000453441 ZNF84P51523 738 aa7.66□□□□□ -1.18
COL28A1-205ENST00000453441 IST1P53990 364 aa7.66□□□□□ -1.18
COL28A1-205ENST00000453441 ESRRGP62508 458 aa7.66□□□□□ -1.18
COL28A1-205ENST00000453441 ROR2Q01974 943 aaKnown RBP7.66□□□□□ -1.18
COL28A1-205ENST00000453441 FAM27E3Q08E93 113 aa7.66□□□□□ -1.18
COL28A1-205ENST00000453441 CAMK2DQ13557 499 aa7.66□□□□□ -1.18
COL28A1-205ENST00000453441 KRR1Q13601 381 aaKnown RBP7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms