RNA–Protein interactions for RNA: ENST00000452182.1

SCN9A-204, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 1 (best)

Gene SCN9A, Length 1,618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-204ENST00000452182 ASB6Q9NWX5 421 aa10.22□□□□□ -0.77
SCN9A-204ENST00000452182 GLTPQ9NZD2 209 aa10.22□□□□□ -0.77
SCN9A-204ENST00000452182 VSX1Q9NZR4 365 aaPredicted RBP10.22□□□□□ -0.77
SCN9A-204ENST00000452182 PRSS37A4D1T9 235 aa10.22□□□□□ -0.77
SCN9A-204ENST00000452182 PYCARD-AS1I3L0S3 204 aa10.22□□□□□ -0.77
SCN9A-204ENST00000452182 SLC16A6O15403 523 aa10.22□□□□□ -0.77
SCN9A-204ENST00000452182 ARHGEF9O43307 516 aa10.22□□□□□ -0.77
SCN9A-204ENST00000452182 UPK3AO75631 287 aa10.22□□□□□ -0.77
SCN9A-204ENST00000452182 SNAP29O95721 258 aa10.22□□□□□ -0.77
SCN9A-204ENST00000452182 POLR2IP36954 125 aaKnown RBP10.22□□□□□ -0.77
SCN9A-204ENST00000452182 CLRN1P58418 232 aa10.22□□□□□ -0.77
SCN9A-204ENST00000452182 ITGADQ13349 1161 aa10.22□□□□□ -0.77
SCN9A-204ENST00000452182 P2RY6Q15077 328 aa10.22□□□□□ -0.77
SCN9A-204ENST00000452182 C12orf73Q69YU5 71 aa10.22□□□□□ -0.77
SCN9A-204ENST00000452182 ZNF474Q6S9Z5 364 aaPredicted RBP10.22□□□□□ -0.77
SCN9A-204ENST00000452182 PTCHD4Q6ZW05 846 aa10.22□□□□□ -0.77
SCN9A-204ENST00000452182 GPR137CQ8N3F9 429 aa10.22□□□□□ -0.77
SCN9A-204ENST00000452182 IQCF1Q8N6M8 205 aa10.22□□□□□ -0.77
SCN9A-204ENST00000452182 OR6N1Q8NGY5 312 aa10.22□□□□□ -0.77
SCN9A-204ENST00000452182 HRASLS5Q96KN8 279 aa10.22□□□□□ -0.77
SCN9A-204ENST00000452182 SLC38A2Q96QD8 506 aa10.22□□□□□ -0.77
SCN9A-204ENST00000452182 RBP7Q96R05 134 aa10.22□□□□□ -0.77
SCN9A-204ENST00000452182 MBOAT4Q96T53 435 aa10.22□□□□□ -0.77
SCN9A-204ENST00000452182 DDOQ99489 341 aa10.22□□□□□ -0.77
SCN9A-204ENST00000452182 RIBC2Q9H4K1 309 aa10.22□□□□□ -0.77
SCN9A-204ENST00000452182 B3GAT2Q9NPZ5 323 aa10.22□□□□□ -0.77
SCN9A-204ENST00000452182 ELOVL5Q9NYP7 299 aa10.22□□□□□ -0.77
SCN9A-204ENST00000452182 UPB1Q9UBR1 384 aa10.22□□□□□ -0.77
SCN9A-204ENST00000452182 PRSS50Q9UI38 385 aa10.22□□□□□ -0.77
SCN9A-204ENST00000452182 KLHL21Q9UJP4 597 aa10.22□□□□□ -0.77
SCN9A-204ENST00000452182 ALPK2Q86TB3 2170 aa10.21□□□□□ -0.77
SCN9A-204ENST00000452182 PCNX1Q96RV3 2341 aa10.21□□□□□ -0.77
SCN9A-204ENST00000452182 SLC22A23A1A5C7 686 aa10.21□□□□□ -0.78
SCN9A-204ENST00000452182 EEF1E1-BLOC1S5C9J1V9 151 aa10.21□□□□□ -0.78
SCN9A-204ENST00000452182 RNF223E7ERA6 249 aa10.21□□□□□ -0.78
SCN9A-204ENST00000452182 ZNF587BE7ETH6 402 aa10.21□□□□□ -0.78
SCN9A-204ENST00000452182 SURF4O15260 269 aa10.21□□□□□ -0.78
SCN9A-204ENST00000452182 EEF1E1O43324 174 aaKnown RBP10.21□□□□□ -0.78
SCN9A-204ENST00000452182 AGFG2O95081 481 aa10.21□□□□□ -0.78
SCN9A-204ENST00000452182 CLDN14O95500 239 aa10.21□□□□□ -0.78
SCN9A-204ENST00000452182 IFNGP01579 166 aa10.21□□□□□ -0.78
SCN9A-204ENST00000452182 COX5AP20674 150 aa10.21□□□□□ -0.78
SCN9A-204ENST00000452182 CDKN2AP42771 156 aaKnown RBP10.21□□□□□ -0.78
SCN9A-204ENST00000452182 ASCL1P50553 236 aa10.21□□□□□ -0.78
SCN9A-204ENST00000452182 EFNB1P98172 346 aa10.21□□□□□ -0.78
SCN9A-204ENST00000452182 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.21□□□□□ -0.78
SCN9A-204ENST00000452182 SRSF1Q07955 248 aaKnown RBP eCLIP10.21□□□□□ -0.78
SCN9A-204ENST00000452182 ZIK1Q3SY52 487 aaPredicted RBP10.21□□□□□ -0.78
SCN9A-204ENST00000452182 C4orf48Q5BLP8 95 aa10.21□□□□□ -0.78
SCN9A-204ENST00000452182 PHYHD1Q5SRE7 291 aa10.21□□□□□ -0.78
SCN9A-204ENST00000452182 SLC35F1Q5T1Q4 408 aa10.21□□□□□ -0.78
SCN9A-204ENST00000452182 C10orf128Q5T292 105 aa10.21□□□□□ -0.78
SCN9A-204ENST00000452182 TMEM236Q5W0B7 351 aa10.21□□□□□ -0.78
SCN9A-204ENST00000452182 CARD17Q5XLA6 110 aa10.21□□□□□ -0.78
SCN9A-204ENST00000452182 FBXW10Q5XX13 1052 aa10.21□□□□□ -0.78
SCN9A-204ENST00000452182 LRFN4Q6PJG9 635 aa10.21□□□□□ -0.78
SCN9A-204ENST00000452182 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.21□□□□□ -0.78
SCN9A-204ENST00000452182 JAZF1Q86VZ6 243 aa10.21□□□□□ -0.78
SCN9A-204ENST00000452182 DEPDC4Q8N2C3 294 aa10.21□□□□□ -0.78
SCN9A-204ENST00000452182 UBE2J2Q8N2K1 259 aa10.21□□□□□ -0.78
SCN9A-204ENST00000452182 FAM26EQ8N5C1 309 aa10.21□□□□□ -0.78
SCN9A-204ENST00000452182 SYT14Q8NB59 555 aa10.21□□□□□ -0.78
SCN9A-204ENST00000452182 NPEPL1Q8NDH3 523 aa10.21□□□□□ -0.78
SCN9A-204ENST00000452182 OR52E2Q8NGJ4 325 aa10.21□□□□□ -0.78
SCN9A-204ENST00000452182 OR4K13Q8NH42 304 aa10.21□□□□□ -0.78
SCN9A-204ENST00000452182 MCHR2Q969V1 340 aa10.21□□□□□ -0.78
SCN9A-204ENST00000452182 BOD1Q96IK1 185 aa10.21□□□□□ -0.78
SCN9A-204ENST00000452182 ALKBH3Q96Q83 286 aaPredicted RBP10.21□□□□□ -0.78
SCN9A-204ENST00000452182 NMNAT3Q96T66 252 aa10.21□□□□□ -0.78
SCN9A-204ENST00000452182 PITX2Q99697 317 aa10.21□□□□□ -0.78
SCN9A-204ENST00000452182 FAM118AQ9NWS6 357 aa10.21□□□□□ -0.78
SCN9A-204ENST00000452182 NDRG4Q9ULP0 352 aaKnown RBP10.21□□□□□ -0.78
SCN9A-204ENST00000452182 DIDO1Q9BTC0 2240 aaKnown RBP10.21□□□□□ -0.78
SCN9A-204ENST00000452182 RIIAD1A6NNX1 92 aa10.2□□□□□ -0.78
SCN9A-204ENST00000452182 M0R3G1 203 aa10.2□□□□□ -0.78
SCN9A-204ENST00000452182 KRT33AO76009 404 aa10.2□□□□□ -0.78
SCN9A-204ENST00000452182 RENP00797 406 aa10.2□□□□□ -0.78
SCN9A-204ENST00000452182 IGHV3-9P01782 118 aa10.2□□□□□ -0.78
SCN9A-204ENST00000452182 ZNF3P17036 446 aa10.2□□□□□ -0.78
SCN9A-204ENST00000452182 MPGP29372 298 aa10.2□□□□□ -0.78
SCN9A-204ENST00000452182 CRABP1P29762 137 aa10.2□□□□□ -0.78
SCN9A-204ENST00000452182 SH3BGRP55822 239 aaPredicted RBP10.2□□□□□ -0.78
SCN9A-204ENST00000452182 ROR2Q01974 943 aaKnown RBP10.2□□□□□ -0.78
SCN9A-204ENST00000452182 LGALS3BPQ08380 585 aa10.2□□□□□ -0.78
SCN9A-204ENST00000452182 CD47Q08722 323 aa10.2□□□□□ -0.78
SCN9A-204ENST00000452182 FAPQ12884 760 aa10.2□□□□□ -0.78
SCN9A-204ENST00000452182 KEAP1Q14145 624 aa10.2□□□□□ -0.78
SCN9A-204ENST00000452182 CDSNQ15517 529 aa10.2□□□□□ -0.78
SCN9A-204ENST00000452182 LEG1Q6P5S2 330 aa10.2□□□□□ -0.78
SCN9A-204ENST00000452182 ZNF627Q7L945 461 aa10.2□□□□□ -0.78
SCN9A-204ENST00000452182 LINGO2Q7L985 606 aa10.2□□□□□ -0.78
SCN9A-204ENST00000452182 LUZP2Q86TE4 346 aa10.2□□□□□ -0.78
SCN9A-204ENST00000452182 SLC37A3Q8NCC5 494 aa10.2□□□□□ -0.78
SCN9A-204ENST00000452182 SDR9C7Q8NEX9 313 aa10.2□□□□□ -0.78
SCN9A-204ENST00000452182 LRRC46Q96FV0 321 aa10.2□□□□□ -0.78
SCN9A-204ENST00000452182 ULBP2Q9BZM5 246 aa10.2□□□□□ -0.78
SCN9A-204ENST00000452182 SYT4Q9H2B2 425 aa10.2□□□□□ -0.78
SCN9A-204ENST00000452182 FN3KQ9H479 309 aa10.2□□□□□ -0.78
SCN9A-204ENST00000452182 CRLF2Q9HC73 371 aa10.2□□□□□ -0.78
SCN9A-204ENST00000452182 GPR35Q9HC97 309 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms