RNA–Protein interactions for RNA: ENST00000452143.5

USP1-204, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 3

Gene USP1, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-204ENST00000452143 KLF3P57682 345 aaPredicted RBP9.32□□□□□ -0.92
USP1-204ENST00000452143 PCBP3P57721 371 aaKnown RBP9.32□□□□□ -0.92
USP1-204ENST00000452143 MAGOHP61326 146 aaKnown RBP9.32□□□□□ -0.92
USP1-204ENST00000452143 MYBPC1Q00872 1141 aa9.32□□□□□ -0.92
USP1-204ENST00000452143 RAB39AQ14964 217 aa9.32□□□□□ -0.92
USP1-204ENST00000452143 ZNF74Q16587 644 aa9.32□□□□□ -0.92
USP1-204ENST00000452143 PAGE3Q5JUK9 113 aa9.32□□□□□ -0.92
USP1-204ENST00000452143 LINC00114Q6XXX2 140 aa9.32□□□□□ -0.92
USP1-204ENST00000452143 USP43Q70EL4 1123 aa9.32□□□□□ -0.92
USP1-204ENST00000452143 SLC35D2Q76EJ3 337 aa9.32□□□□□ -0.92
USP1-204ENST00000452143 CARM1Q86X55 608 aa9.32□□□□□ -0.92
USP1-204ENST00000452143 WDFY1Q8IWB7 410 aa9.32□□□□□ -0.92
USP1-204ENST00000452143 SKA3Q8IX90 412 aa9.32□□□□□ -0.92
USP1-204ENST00000452143 SLC30A7Q8NEW0 376 aa9.32□□□□□ -0.92
USP1-204ENST00000452143 YIPF5Q969M3 257 aa9.32□□□□□ -0.92
USP1-204ENST00000452143 TLCD1Q96CP7 247 aa9.32□□□□□ -0.92
USP1-204ENST00000452143 SLC25A44Q96H78 314 aaPredicted RBP9.32□□□□□ -0.92
USP1-204ENST00000452143 LRRC37BQ96QE4 947 aa9.32□□□□□ -0.92
USP1-204ENST00000452143 ARHGDIGQ99819 225 aa9.32□□□□□ -0.92
USP1-204ENST00000452143 BCL2L14Q9BZR8 327 aa9.32□□□□□ -0.92
USP1-204ENST00000452143 SLC19A3Q9BZV2 496 aa9.32□□□□□ -0.92
USP1-204ENST00000452143 IKZF5Q9H5V7 419 aa9.32□□□□□ -0.92
USP1-204ENST00000452143 NARFLQ9H6Q4 476 aa9.32□□□□□ -0.92
USP1-204ENST00000452143 SLC52A3Q9NQ40 469 aa9.32□□□□□ -0.92
USP1-204ENST00000452143 NKIRAS2Q9NYR9 191 aa9.32□□□□□ -0.92
USP1-204ENST00000452143 ZNF229Q9UJW7 825 aa9.32□□□□□ -0.92
USP1-204ENST00000452143 FZR1Q9UM11 496 aa9.32□□□□□ -0.92
USP1-204ENST00000452143 TANC2Q9HCD6 1990 aa9.32□□□□□ -0.92
USP1-204ENST00000452143 C17orf100A8MU93 164 aa9.31□□□□□ -0.92
USP1-204ENST00000452143 C11orf98E9PRG8 122 aa9.31□□□□□ -0.92
USP1-204ENST00000452143 C3orf80F5H4A9 247 aa9.31□□□□□ -0.92
USP1-204ENST00000452143 DHHO43323 396 aa9.31□□□□□ -0.92
USP1-204ENST00000452143 MGRN1O60291 552 aa9.31□□□□□ -0.92
USP1-204ENST00000452143 MT-ND5P03915 603 aa9.31□□□□□ -0.92
USP1-204ENST00000452143 PGA4P0DJD7 388 aa9.31□□□□□ -0.92
USP1-204ENST00000452143 PGA3P0DJD8 388 aa9.31□□□□□ -0.92
USP1-204ENST00000452143 ZNF250P15622 560 aa9.31□□□□□ -0.92
USP1-204ENST00000452143 ATP4BP51164 291 aa9.31□□□□□ -0.92
USP1-204ENST00000452143 HILS1P60008 231 aa9.31□□□□□ -0.92
USP1-204ENST00000452143 LMO4P61968 165 aa9.31□□□□□ -0.92
USP1-204ENST00000452143 ACTG1P63261 375 aa9.31□□□□□ -0.92
USP1-204ENST00000452143 TEKQ02763 1124 aa9.31□□□□□ -0.92
USP1-204ENST00000452143 RUNX1T1Q06455 604 aa9.31□□□□□ -0.92
USP1-204ENST00000452143 RBBP4Q09028 425 aa9.31□□□□□ -0.92
USP1-204ENST00000452143 ZP4Q12836 540 aa9.31□□□□□ -0.92
USP1-204ENST00000452143 TBC1D28Q2M2D7 210 aa9.31□□□□□ -0.92
USP1-204ENST00000452143 SLC36A2Q495M3 483 aa9.31□□□□□ -0.92
USP1-204ENST00000452143 TMEM53Q6P2H8 277 aa9.31□□□□□ -0.92
USP1-204ENST00000452143 TMEM154Q6P9G4 183 aa9.31□□□□□ -0.92
USP1-204ENST00000452143 WDR88Q6ZMY6 472 aa9.31□□□□□ -0.92
USP1-204ENST00000452143 C11orf65Q8NCR3 313 aa9.31□□□□□ -0.92
USP1-204ENST00000452143 OR1J2Q8NGS2 313 aa9.31□□□□□ -0.92
USP1-204ENST00000452143 ZNF519Q8TB69 540 aa9.31□□□□□ -0.92
USP1-204ENST00000452143 ZBTB9Q96C00 473 aa9.31□□□□□ -0.92
USP1-204ENST00000452143 RAB39BQ96DA2 213 aa9.31□□□□□ -0.92
USP1-204ENST00000452143 MPP4Q96JB8 637 aa9.31□□□□□ -0.92
USP1-204ENST00000452143 JMJD8Q96S16 334 aa9.31□□□□□ -0.92
USP1-204ENST00000452143 MCHR1Q99705 422 aa9.31□□□□□ -0.92
USP1-204ENST00000452143 WFDC6Q9BQY6 131 aa9.31□□□□□ -0.92
USP1-204ENST00000452143 CPPED1Q9BRF8 314 aaPredicted RBP9.31□□□□□ -0.92
USP1-204ENST00000452143 CCDC28BQ9BUN5 200 aa9.31□□□□□ -0.92
USP1-204ENST00000452143 ZNF426Q9BUY5 554 aa9.31□□□□□ -0.92
USP1-204ENST00000452143 CDH20Q9HBT6 801 aa9.31□□□□□ -0.92
USP1-204ENST00000452143 LPAR2Q9HBW0 351 aa9.31□□□□□ -0.92
USP1-204ENST00000452143 HINT3Q9NQE9 182 aaKnown RBP9.31□□□□□ -0.92
USP1-204ENST00000452143 NANSQ9NR45 359 aa9.31□□□□□ -0.92
USP1-204ENST00000452143 SLCO1C1Q9NYB5 712 aa9.31□□□□□ -0.92
USP1-204ENST00000452143 TAS2R5Q9NYW4 299 aa9.31□□□□□ -0.92
USP1-204ENST00000452143 TREM2Q9NZC2 230 aa9.31□□□□□ -0.92
USP1-204ENST00000452143 TAAR3PQ9P1P4 343 aa9.31□□□□□ -0.92
USP1-204ENST00000452143 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.31□□□□□ -0.92
USP1-204ENST00000452143 A0A0G2JMP0 313 aa9.3□□□□□ -0.92
USP1-204ENST00000452143 A0A0X1KG70 313 aa9.3□□□□□ -0.92
USP1-204ENST00000452143 CENPBD1B2RD01 187 aa9.3□□□□□ -0.92
USP1-204ENST00000452143 M0R3H8 397 aa9.3□□□□□ -0.92
USP1-204ENST00000452143 WNT9BO14905 357 aa9.3□□□□□ -0.92
USP1-204ENST00000452143 RNF13O43567 381 aa9.3□□□□□ -0.92
USP1-204ENST00000452143 IGHG1P01857 330 aa9.3□□□□□ -0.92
USP1-204ENST00000452143 FAM157BP0CG42 384 aa9.3□□□□□ -0.92
USP1-204ENST00000452143 CRYBB2P43320 205 aa9.3□□□□□ -0.92
USP1-204ENST00000452143 RAD52P43351 418 aa9.3□□□□□ -0.92
USP1-204ENST00000452143 MAGEB1P43366 347 aa9.3□□□□□ -0.92
USP1-204ENST00000452143 LIMS1P48059 325 aa9.3□□□□□ -0.92
USP1-204ENST00000452143 IDH3AP50213 366 aa9.3□□□□□ -0.92
USP1-204ENST00000452143 ARFIP2P53365 341 aa9.3□□□□□ -0.92
USP1-204ENST00000452143 MOGQ16653 247 aa9.3□□□□□ -0.92
USP1-204ENST00000452143 HIST3H3Q16695 136 aa9.3□□□□□ -0.92
USP1-204ENST00000452143 CYP51A1Q16850 503 aa9.3□□□□□ -0.92
USP1-204ENST00000452143 FAM209AQ5JX71 171 aa9.3□□□□□ -0.92
USP1-204ENST00000452143 ENTPD8Q5MY95 495 aa9.3□□□□□ -0.92
USP1-204ENST00000452143 ACSM5Q6NUN0 579 aa9.3□□□□□ -0.92
USP1-204ENST00000452143 FAHD2BQ6P2I3 314 aaPredicted RBP9.3□□□□□ -0.92
USP1-204ENST00000452143 TTC33Q6PID6 262 aaPredicted RBP9.3□□□□□ -0.92
USP1-204ENST00000452143 LRFN4Q6PJG9 635 aa9.3□□□□□ -0.92
USP1-204ENST00000452143 HDDC2Q7Z4H3 204 aa9.3□□□□□ -0.92
USP1-204ENST00000452143 NANOGNBQ7Z5D8 188 aa9.3□□□□□ -0.92
USP1-204ENST00000452143 SLC30A8Q8IWU4 369 aa9.3□□□□□ -0.92
USP1-204ENST00000452143 SMYD1Q8NB12 490 aa9.3□□□□□ -0.92
USP1-204ENST00000452143 OR4M2Q8NGB6 313 aa9.3□□□□□ -0.92
USP1-204ENST00000452143 OR4K5Q8NGD3 323 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms