RNA–Protein interactions for RNA: ENST00000449864.5

HDLBP-223, Transcript of high density lipoprotein binding protein, human

TSL 5

Gene HDLBP, Length 529 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDLBP-223	ENST00000449864	SYT14	Q8NB59	555 aa		13.7	□□□□□ -0.22
HDLBP-223	ENST00000449864	RBM15B	Q8NDT2	890 aa	Known RBP	13.7	□□□□□ -0.22
HDLBP-223	ENST00000449864	ACOT11	Q8WXI4	607 aa	Predicted RBP	13.7	□□□□□ -0.22
HDLBP-223	ENST00000449864	MS4A3	Q96HJ5	214 aa		13.7	□□□□□ -0.22
HDLBP-223	ENST00000449864	LRRC37B	Q96QE4	947 aa		13.7	□□□□□ -0.22
HDLBP-223	ENST00000449864	REG4	Q9BYZ8	158 aa		13.7	□□□□□ -0.22
HDLBP-223	ENST00000449864	DENND2D	Q9H6A0	471 aa	Predicted RBP	13.7	□□□□□ -0.22
HDLBP-223	ENST00000449864	MAN2C1	Q9NTJ4	1040 aa		13.7	□□□□□ -0.22
HDLBP-223	ENST00000449864	TMEM38B	Q9NVV0	291 aa		13.7	□□□□□ -0.22
HDLBP-223	ENST00000449864	SAMD4A	Q9UPU9	718 aa	Known RBP	13.7	□□□□□ -0.22
HDLBP-223	ENST00000449864	HIF3A	Q9Y2N7	669 aa		13.7	□□□□□ -0.22
HDLBP-223	ENST00000449864	NPIPB13	A6NJU9	1138 aa		13.69	□□□□□ -0.22
HDLBP-223	ENST00000449864	EFCAB9	A8MZ26	197 aa		13.69	□□□□□ -0.22
HDLBP-223	ENST00000449864	CENPBD1	B2RD01	187 aa		13.69	□□□□□ -0.22
HDLBP-223	ENST00000449864		B9A039	149 aa		13.69	□□□□□ -0.22
HDLBP-223	ENST00000449864	NPIPB4	C9JG80	1138 aa		13.69	□□□□□ -0.22
HDLBP-223	ENST00000449864	FFAR1	O14842	300 aa		13.69	□□□□□ -0.22
HDLBP-223	ENST00000449864	TRMU	O75648	421 aa	Known RBP	13.69	□□□□□ -0.22
HDLBP-223	ENST00000449864	NR2C1	P13056	603 aa		13.69	□□□□□ -0.22
HDLBP-223	ENST00000449864	ZNF14	P17017	642 aa	Predicted RBP	13.69	□□□□□ -0.22
HDLBP-223	ENST00000449864	TCN1	P20061	433 aa	Predicted RBP	13.69	□□□□□ -0.22
HDLBP-223	ENST00000449864	NPR2	P20594	1047 aa		13.69	□□□□□ -0.22
HDLBP-223	ENST00000449864	THBS4	P35443	961 aa		13.69	□□□□□ -0.22
HDLBP-223	ENST00000449864	GIPR	P48546	466 aa		13.69	□□□□□ -0.22
HDLBP-223	ENST00000449864	EFNA4	P52798	201 aa		13.69	□□□□□ -0.22
HDLBP-223	ENST00000449864	DSCR9	P59020	149 aa		13.69	□□□□□ -0.22
HDLBP-223	ENST00000449864	HGFAC	Q04756	655 aa		13.69	□□□□□ -0.22
HDLBP-223	ENST00000449864	RUNX1T1	Q06455	604 aa		13.69	□□□□□ -0.22
HDLBP-223	ENST00000449864	CD47	Q08722	323 aa		13.69	□□□□□ -0.22
HDLBP-223	ENST00000449864	LAPTM4A	Q15012	233 aa		13.69	□□□□□ -0.22
HDLBP-223	ENST00000449864	SWI5	Q1ZZU3	235 aa		13.69	□□□□□ -0.22
HDLBP-223	ENST00000449864	GLYAT	Q6IB77	296 aa		13.69	□□□□□ -0.22
HDLBP-223	ENST00000449864	KRT80	Q6KB66	452 aa		13.69	□□□□□ -0.22
HDLBP-223	ENST00000449864	LRFN4	Q6PJG9	635 aa		13.69	□□□□□ -0.22
HDLBP-223	ENST00000449864	DNM1P46	Q6ZS02	220 aa		13.69	□□□□□ -0.22
HDLBP-223	ENST00000449864	OAF	Q86UD1	273 aa		13.69	□□□□□ -0.22
HDLBP-223	ENST00000449864	MEX3D	Q86XN8	651 aa	Known RBP	13.69	□□□□□ -0.22
HDLBP-223	ENST00000449864	MAPK1IP1L	Q8NDC0	245 aa		13.69	□□□□□ -0.22
HDLBP-223	ENST00000449864	OR4K5	Q8NGD3	323 aa		13.69	□□□□□ -0.22
HDLBP-223	ENST00000449864	MCHR2	Q969V1	340 aa		13.69	□□□□□ -0.22
HDLBP-223	ENST00000449864	POM121	Q96HA1	1249 aa		13.69	□□□□□ -0.22
HDLBP-223	ENST00000449864	SH3GL3	Q99963	347 aa		13.69	□□□□□ -0.22
HDLBP-223	ENST00000449864	VRK1	Q99986	396 aa	Predicted RBP	13.69	□□□□□ -0.22
HDLBP-223	ENST00000449864	TXNIP	Q9H3M7	391 aa		13.69	□□□□□ -0.22
HDLBP-223	ENST00000449864	ZNF442	Q9H7R0	627 aa		13.69	□□□□□ -0.22
HDLBP-223	ENST00000449864	ZNF224	Q9NZL3	707 aa		13.69	□□□□□ -0.22
HDLBP-223	ENST00000449864	TAGLN3	Q9UI15	199 aa		13.69	□□□□□ -0.22
HDLBP-223	ENST00000449864	FAM32A	Q9Y421	112 aa	Known RBP	13.69	□□□□□ -0.22
HDLBP-223	ENST00000449864	SPEF1	Q9Y4P9	236 aa		13.69	□□□□□ -0.22
HDLBP-223	ENST00000449864	ENPP4	Q9Y6X5	453 aa		13.69	□□□□□ -0.22
HDLBP-223	ENST00000449864	TRAV27	A0A087WT01	109 aa		13.68	□□□□□ -0.22
HDLBP-223	ENST00000449864	hCG_2039718	K7EN88	272 aa		13.68	□□□□□ -0.22
HDLBP-223	ENST00000449864	TP53	P04637	393 aa	Predicted RBP	13.68	□□□□□ -0.22
HDLBP-223	ENST00000449864	CSF3	P09919	207 aa		13.68	□□□□□ -0.22
HDLBP-223	ENST00000449864	TSPAN19	P0C672	248 aa		13.68	□□□□□ -0.22
HDLBP-223	ENST00000449864	PATE4	P0C8F1	98 aa		13.68	□□□□□ -0.22
HDLBP-223	ENST00000449864	MAK	P20794	623 aa		13.68	□□□□□ -0.22
HDLBP-223	ENST00000449864	FUT4	P22083	530 aa		13.68	□□□□□ -0.22
HDLBP-223	ENST00000449864	GPR4	P46093	362 aa		13.68	□□□□□ -0.22
HDLBP-223	ENST00000449864	LSM11	P83369	360 aa	Known RBP eCLIP	13.68	□□□□□ -0.22
HDLBP-223	ENST00000449864	GALK2	Q01415	458 aa		13.68	□□□□□ -0.22
HDLBP-223	ENST00000449864	PRKCD	Q05655	676 aa		13.68	□□□□□ -0.22
HDLBP-223	ENST00000449864	RAB39A	Q14964	217 aa		13.68	□□□□□ -0.22
HDLBP-223	ENST00000449864	TAF11	Q15544	211 aa		13.68	□□□□□ -0.22
HDLBP-223	ENST00000449864	EFNB3	Q15768	340 aa		13.68	□□□□□ -0.22
HDLBP-223	ENST00000449864	HIST3H3	Q16695	136 aa		13.68	□□□□□ -0.22
HDLBP-223	ENST00000449864	MST1L	Q2TV78	715 aa		13.68	□□□□□ -0.22
HDLBP-223	ENST00000449864	SLC36A2	Q495M3	483 aa		13.68	□□□□□ -0.22
HDLBP-223	ENST00000449864	FGD3	Q5JSP0	725 aa		13.68	□□□□□ -0.22
HDLBP-223	ENST00000449864	ARMC4	Q5T2S8	1044 aa		13.68	□□□□□ -0.22
HDLBP-223	ENST00000449864	TMEM53	Q6P2H8	277 aa		13.68	□□□□□ -0.22
HDLBP-223	ENST00000449864	SLC16A14	Q7RTX9	510 aa		13.68	□□□□□ -0.22
HDLBP-223	ENST00000449864	PIGW	Q7Z7B1	504 aa		13.68	□□□□□ -0.22
HDLBP-223	ENST00000449864	IGFN1	Q86VF2	1251 aa		13.68	□□□□□ -0.22
HDLBP-223	ENST00000449864	SKA3	Q8IX90	412 aa		13.68	□□□□□ -0.22
HDLBP-223	ENST00000449864	RNF113B	Q8IZP6	322 aa	Known RBP	13.68	□□□□□ -0.22
HDLBP-223	ENST00000449864	PGAM4	Q8N0Y7	254 aa		13.68	□□□□□ -0.22
HDLBP-223	ENST00000449864	ZNF525	Q8N782	197 aa		13.68	□□□□□ -0.22
HDLBP-223	ENST00000449864	FAM156A	Q8NDB6	213 aa		13.68	□□□□□ -0.22
HDLBP-223	ENST00000449864	OR13C2	Q8NGS9	318 aa		13.68	□□□□□ -0.22
HDLBP-223	ENST00000449864	OR51A7	Q8NH64	312 aa		13.68	□□□□□ -0.22
HDLBP-223	ENST00000449864	MRPL13	Q9BYD1	178 aa	Known RBP	13.68	□□□□□ -0.22
HDLBP-223	ENST00000449864	NDEL1	Q9GZM8	345 aa		13.68	□□□□□ -0.22
HDLBP-223	ENST00000449864	ANKRD19P	Q9H560	264 aa		13.68	□□□□□ -0.22
HDLBP-223	ENST00000449864	RNF121	Q9H920	327 aa		13.68	□□□□□ -0.22
HDLBP-223	ENST00000449864	ARL8B	Q9NVJ2	186 aa		13.68	□□□□□ -0.22
HDLBP-223	ENST00000449864	NDE1	Q9NXR1	346 aa		13.68	□□□□□ -0.22
HDLBP-223	ENST00000449864	MAGEL2	Q9UJ55	1249 aa		13.68	□□□□□ -0.22
HDLBP-223	ENST00000449864		V9GYQ6	96 aa		13.68	□□□□□ -0.22
HDLBP-223	ENST00000449864	IGHV4-30-2	A0A087WSY4	118 aa		13.67	□□□□□ -0.22
HDLBP-223	ENST00000449864		A0A087WUU8	490 aa		13.67	□□□□□ -0.22
HDLBP-223	ENST00000449864	PRSS23	O95084	383 aa		13.67	□□□□□ -0.22
HDLBP-223	ENST00000449864	SLC2A10	O95528	541 aa		13.67	□□□□□ -0.22
HDLBP-223	ENST00000449864	H1F0	P07305	194 aa	Known RBP	13.67	□□□□□ -0.22
HDLBP-223	ENST00000449864	ERCC1	P07992	297 aa	Predicted RBP	13.67	□□□□□ -0.22
HDLBP-223	ENST00000449864	HOXB4	P17483	251 aa	Predicted RBP	13.67	□□□□□ -0.22
HDLBP-223	ENST00000449864	SLC9A3	P48764	834 aa		13.67	□□□□□ -0.22
HDLBP-223	ENST00000449864	CTXN1	P60606	82 aa		13.67	□□□□□ -0.22
HDLBP-223	ENST00000449864	RPL27	P61353	136 aa	Known RBP	13.67	□□□□□ -0.22
HDLBP-223	ENST00000449864	PPP2R2B	Q00005	443 aa		13.67	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms