RNA–Protein interactions for RNA: ENST00000449744.1

CHD3-205, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 880 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-205ENST00000449744 LOC390937A0A1W2PQ73 354 aa13.2□□□□□ -0.3
CHD3-205ENST00000449744 AQP2P41181 271 aa13.2□□□□□ -0.3
CHD3-205ENST00000449744 LSM11P83369 360 aaKnown RBP eCLIP13.2□□□□□ -0.3
CHD3-205ENST00000449744 VLDLRP98155 873 aa13.2□□□□□ -0.3
CHD3-205ENST00000449744 LIPEQ05469 1076 aa13.2□□□□□ -0.3
CHD3-205ENST00000449744 GGTLC2Q14390 218 aa13.2□□□□□ -0.3
CHD3-205ENST00000449744 RAB39AQ14964 217 aa13.2□□□□□ -0.3
CHD3-205ENST00000449744 SLC15A3Q8IY34 581 aa13.2□□□□□ -0.3
CHD3-205ENST00000449744 NEU4Q8WWR8 484 aaPredicted RBP13.2□□□□□ -0.3
CHD3-205ENST00000449744 ZNF75AQ96N20 296 aa13.2□□□□□ -0.3
CHD3-205ENST00000449744 EFCAB1Q9HAE3 211 aa13.2□□□□□ -0.3
CHD3-205ENST00000449744 ZNF224Q9NZL3 707 aa13.2□□□□□ -0.3
CHD3-205ENST00000449744 ABCA1O95477 2261 aa13.2□□□□□ -0.3
CHD3-205ENST00000449744 HTR3EA5X5Y0 456 aa13.19□□□□□ -0.3
CHD3-205ENST00000449744 CENPBD1B2RD01 187 aa13.19□□□□□ -0.3
CHD3-205ENST00000449744 CXCR6O00574 342 aa13.19□□□□□ -0.3
CHD3-205ENST00000449744 TRMUO75648 421 aaKnown RBP13.19□□□□□ -0.3
CHD3-205ENST00000449744 ZNF682O95780 498 aa13.19□□□□□ -0.3
CHD3-205ENST00000449744 IFNW1P05000 195 aa13.19□□□□□ -0.3
CHD3-205ENST00000449744 SERPINA5P05154 406 aa13.19□□□□□ -0.3
CHD3-205ENST00000449744 PATE4P0C8F1 98 aa13.19□□□□□ -0.3
CHD3-205ENST00000449744 IFI30P13284 250 aa13.19□□□□□ -0.3
CHD3-205ENST00000449744 ZNF35P13682 527 aa13.19□□□□□ -0.3
CHD3-205ENST00000449744 ACADSP16219 412 aa13.19□□□□□ -0.3
CHD3-205ENST00000449744 YAP1P46937 504 aaKnown RBP13.19□□□□□ -0.3
CHD3-205ENST00000449744 SLC7A2P52569 658 aa13.19□□□□□ -0.3
CHD3-205ENST00000449744 RPS23P62266 143 aaKnown RBP13.19□□□□□ -0.3
CHD3-205ENST00000449744 MYBPC1Q00872 1141 aa13.19□□□□□ -0.3
CHD3-205ENST00000449744 SLC36A2Q495M3 483 aa13.19□□□□□ -0.3
CHD3-205ENST00000449744 IQCCQ4KMZ1 466 aa13.19□□□□□ -0.3
CHD3-205ENST00000449744 C6orf52Q5T4I8 152 aa13.19□□□□□ -0.3
CHD3-205ENST00000449744 CYB5R2Q6BCY4 276 aa13.19□□□□□ -0.3
CHD3-205ENST00000449744 TMEM53Q6P2H8 277 aa13.19□□□□□ -0.3
CHD3-205ENST00000449744 DPPA2Q7Z7J5 298 aa13.19□□□□□ -0.3
CHD3-205ENST00000449744 SYT14Q8NB59 555 aa13.19□□□□□ -0.3
CHD3-205ENST00000449744 NOXO1Q8NFA2 376 aa13.19□□□□□ -0.3
CHD3-205ENST00000449744 OR4K5Q8NGD3 323 aa13.19□□□□□ -0.3
CHD3-205ENST00000449744 MOSPD2Q8NHP6 518 aa13.19□□□□□ -0.3
CHD3-205ENST00000449744 LIPHQ8WWY8 451 aa13.19□□□□□ -0.3
CHD3-205ENST00000449744 ASB10Q8WXI3 467 aa13.19□□□□□ -0.3
CHD3-205ENST00000449744 MCHR2Q969V1 340 aa13.19□□□□□ -0.3
CHD3-205ENST00000449744 MRPL24Q96A35 216 aaKnown RBP13.19□□□□□ -0.3
CHD3-205ENST00000449744 FOXN4Q96NZ1 517 aa13.19□□□□□ -0.3
CHD3-205ENST00000449744 ZNF347Q96SE7 839 aa13.19□□□□□ -0.3
CHD3-205ENST00000449744 SH3GL3Q99963 347 aa13.19□□□□□ -0.3
CHD3-205ENST00000449744 A4GNTQ9UNA3 340 aa13.19□□□□□ -0.3
CHD3-205ENST00000449744 TMEM129A0AVI4 362 aa13.18□□□□□ -0.3
CHD3-205ENST00000449744 KIAA1324LA8MWY0 1029 aaPredicted RBP13.18□□□□□ -0.3
CHD3-205ENST00000449744 VWC2LB2RUY7 222 aa13.18□□□□□ -0.3
CHD3-205ENST00000449744 NDUFAB1O14561 156 aa13.18□□□□□ -0.3
CHD3-205ENST00000449744 PIP5K1CO60331 668 aa13.18□□□□□ -0.3
CHD3-205ENST00000449744 NR2C1P13056 603 aa13.18□□□□□ -0.3
CHD3-205ENST00000449744 GLRXP35754 106 aa13.18□□□□□ -0.3
CHD3-205ENST00000449744 NR4A2P43354 598 aa13.18□□□□□ -0.3
CHD3-205ENST00000449744 GZMKP49863 264 aa13.18□□□□□ -0.3
CHD3-205ENST00000449744 NUDT2P50583 147 aa13.18□□□□□ -0.3
CHD3-205ENST00000449744 RUNX1T1Q06455 604 aa13.18□□□□□ -0.3
CHD3-205ENST00000449744 LAPTM4AQ15012 233 aa13.18□□□□□ -0.3
CHD3-205ENST00000449744 IFI44LQ53G44 452 aa13.18□□□□□ -0.3
CHD3-205ENST00000449744 ALG10Q5BKT4 473 aa13.18□□□□□ -0.3
CHD3-205ENST00000449744 FKBP9P1Q75LS8 142 aa13.18□□□□□ -0.3
CHD3-205ENST00000449744 SLC16A14Q7RTX9 510 aa13.18□□□□□ -0.3
CHD3-205ENST00000449744 VTCN1Q7Z7D3 282 aa13.18□□□□□ -0.3
CHD3-205ENST00000449744 HIPK1Q86Z02 1210 aa13.18□□□□□ -0.3
CHD3-205ENST00000449744 CDK20Q8IZL9 346 aa13.18□□□□□ -0.3
CHD3-205ENST00000449744 ZNF540Q8NDQ6 660 aa13.18□□□□□ -0.3
CHD3-205ENST00000449744 BPIFA2Q96DR5 249 aa13.18□□□□□ -0.3
CHD3-205ENST00000449744 KCNK17Q96T54 332 aa13.18□□□□□ -0.3
CHD3-205ENST00000449744 FNDC11Q9BVV2 318 aa13.18□□□□□ -0.3
CHD3-205ENST00000449744 KCNN2Q9H2S1 579 aa13.18□□□□□ -0.3
CHD3-205ENST00000449744 GMPR2Q9P2T1 348 aaKnown RBP13.18□□□□□ -0.3
CHD3-205ENST00000449744 RHCGQ9UBD6 479 aa13.18□□□□□ -0.3
CHD3-205ENST00000449744 SLC7A8Q9UHI5 535 aa13.18□□□□□ -0.3
CHD3-205ENST00000449744 ADAM21Q9UKJ8 722 aa13.18□□□□□ -0.3
CHD3-205ENST00000449744 CHD3Q12873 2000 aaKnown RBP13.18□□□□□ -0.3
CHD3-205ENST00000449744 DNHD1Q96M86 4753 aa13.17□□□□□ -0.3
CHD3-205ENST00000449744 NME4O00746 187 aa13.17□□□□□ -0.3
CHD3-205ENST00000449744 ATP8B1O43520 1251 aa13.17□□□□□ -0.3
CHD3-205ENST00000449744 MGRN1O60291 552 aa13.17□□□□□ -0.3
CHD3-205ENST00000449744 PTHP01270 115 aa13.17□□□□□ -0.3
CHD3-205ENST00000449744 ADRA2AP08913 450 aa13.17□□□□□ -0.3
CHD3-205ENST00000449744 SAGP10523 405 aaPredicted RBP13.17□□□□□ -0.3
CHD3-205ENST00000449744 DAOP14920 347 aa13.17□□□□□ -0.3
CHD3-205ENST00000449744 EVX1P49640 407 aa13.17□□□□□ -0.3
CHD3-205ENST00000449744 PLP2Q04941 152 aa13.17□□□□□ -0.3
CHD3-205ENST00000449744 TRAM2Q15035 370 aa13.17□□□□□ -0.3
CHD3-205ENST00000449744 HIST3H3Q16695 136 aa13.17□□□□□ -0.3
CHD3-205ENST00000449744 CHRFAM7AQ494W8 412 aa13.17□□□□□ -0.3
CHD3-205ENST00000449744 NRN1LQ496H8 165 aa13.17□□□□□ -0.3
CHD3-205ENST00000449744 CBLL1Q75N03 491 aa13.17□□□□□ -0.3
CHD3-205ENST00000449744 OFCC1Q8IZS5 231 aa13.17□□□□□ -0.3
CHD3-205ENST00000449744 ZCCHC24Q8N2G6 241 aaKnown RBP13.17□□□□□ -0.3
CHD3-205ENST00000449744 SLC30A7Q8NEW0 376 aa13.17□□□□□ -0.3
CHD3-205ENST00000449744 FGFBP3Q8TAT2 258 aa13.17□□□□□ -0.3
CHD3-205ENST00000449744 GEMIN6Q8WXD5 167 aaKnown RBP13.17□□□□□ -0.3
CHD3-205ENST00000449744 FAM162AQ96A26 154 aa13.17□□□□□ -0.3
CHD3-205ENST00000449744 MDFIQ99750 246 aa13.17□□□□□ -0.3
CHD3-205ENST00000449744 ELAC2Q9BQ52 826 aaKnown RBP13.17□□□□□ -0.3
CHD3-205ENST00000449744 SYT3Q9BQG1 590 aa13.17□□□□□ -0.3
CHD3-205ENST00000449744 MRPL13Q9BYD1 178 aaKnown RBP13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms