RNA–Protein interactions for RNA: ENST00000449575.6

CCDC171-203, Transcript of coiled-coil domain containing 171, humanhuman

TSL 2

Gene CCDC171, Length 2,628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-203ENST00000449575 ZC3HAV1LQ96H79 300 aaKnown RBP8.84□□□□□ -1
CCDC171-203ENST00000449575 PIGQQ9BRB3 760 aa8.84□□□□□ -1
CCDC171-203ENST00000449575 UQCC2Q9BRT2 126 aa8.84□□□□□ -1
CCDC171-203ENST00000449575 HDHD5Q9BXW7 423 aa8.84□□□□□ -1
CCDC171-203ENST00000449575 GABARAPL3Q9BY60 117 aa8.84□□□□□ -1
CCDC171-203ENST00000449575 OR11A1Q9GZK7 315 aa8.84□□□□□ -1
CCDC171-203ENST00000449575 RACGAP1Q9H0H5 632 aa8.84□□□□□ -1
CCDC171-203ENST00000449575 IL1RAPQ9NPH3 570 aa8.84□□□□□ -1
CCDC171-203ENST00000449575 ACER3Q9NUN7 267 aa8.84□□□□□ -1
CCDC171-203ENST00000449575 ELF5Q9UKW6 265 aaPredicted RBP8.84□□□□□ -1
CCDC171-203ENST00000449575 IQCMA0A1B0GVH7 501 aa8.83□□□□□ -1
CCDC171-203ENST00000449575 E9PQ18 207 aa8.83□□□□□ -1
CCDC171-203ENST00000449575 SYT5O00445 386 aa8.83□□□□□ -1
CCDC171-203ENST00000449575 ZNF708P17019 499 aa8.83□□□□□ -1
CCDC171-203ENST00000449575 KLK2P20151 261 aa8.83□□□□□ -1
CCDC171-203ENST00000449575 C21orf33P30042 268 aaPredicted RBP8.83□□□□□ -1
CCDC171-203ENST00000449575 IRF3Q14653 427 aa8.83□□□□□ -1
CCDC171-203ENST00000449575 TMEM95Q3KNT9 176 aa8.83□□□□□ -1
CCDC171-203ENST00000449575 SLC25A53Q5H9E4 307 aa8.83□□□□□ -1
CCDC171-203ENST00000449575 RTL6Q6ICC9 239 aa8.83□□□□□ -1
CCDC171-203ENST00000449575 ZNF585AQ6P3V2 769 aa8.83□□□□□ -1
CCDC171-203ENST00000449575 FAHD1Q6P587 224 aa8.83□□□□□ -1
CCDC171-203ENST00000449575 FAM131AQ6UXB0 335 aa8.83□□□□□ -1
CCDC171-203ENST00000449575 ZNF550Q7Z398 422 aa8.83□□□□□ -1
CCDC171-203ENST00000449575 C3orf49Q96BT1 292 aa8.83□□□□□ -1
CCDC171-203ENST00000449575 ZNF845Q96IR2 970 aaPredicted RBP8.83□□□□□ -1
CCDC171-203ENST00000449575 ARL5BQ96KC2 179 aa8.83□□□□□ -1
CCDC171-203ENST00000449575 MCHR1Q99705 422 aa8.83□□□□□ -1
CCDC171-203ENST00000449575 PRRG3Q9BZD7 231 aa8.83□□□□□ -1
CCDC171-203ENST00000449575 ADAM19Q9H013 955 aa8.83□□□□□ -1
CCDC171-203ENST00000449575 C11orf54Q9H0W9 315 aaPredicted RBP8.83□□□□□ -1
CCDC171-203ENST00000449575 RNF167Q9H6Y7 350 aa8.83□□□□□ -1
CCDC171-203ENST00000449575 REEP1Q9H902 201 aa8.83□□□□□ -1
CCDC171-203ENST00000449575 PTTG3PQ9NZH4 202 aa8.83□□□□□ -1
CCDC171-203ENST00000449575 RPS6KA6Q9UK32 745 aa8.83□□□□□ -1
CCDC171-203ENST00000449575 ING4Q9UNL4 249 aa8.83□□□□□ -1
CCDC171-203ENST00000449575 CAMK2AQ9UQM7 478 aa8.83□□□□□ -1
CCDC171-203ENST00000449575 CACNA1CQ13936 2221 aa8.83□□□□□ -1
CCDC171-203ENST00000449575 A0A087WZY1 265 aa8.83□□□□□ -1
CCDC171-203ENST00000449575 A0A0J9YW62 118 aa8.83□□□□□ -1
CCDC171-203ENST00000449575 A0A1B0GWA3 101 aa8.83□□□□□ -1
CCDC171-203ENST00000449575 A0A1W2PNR3 127 aa8.83□□□□□ -1
CCDC171-203ENST00000449575 TOR1AO14656 332 aa8.83□□□□□ -1
CCDC171-203ENST00000449575 MYL12BO14950 172 aa8.83□□□□□ -1
CCDC171-203ENST00000449575 AKR7A2O43488 359 aa8.83□□□□□ -1
CCDC171-203ENST00000449575 FABP3P05413 133 aa8.83□□□□□ -1
CCDC171-203ENST00000449575 GP1BBP13224 206 aa8.83□□□□□ -1
CCDC171-203ENST00000449575 MYL12AP19105 171 aa8.83□□□□□ -1
CCDC171-203ENST00000449575 POU3F2P20265 443 aaPredicted RBP8.83□□□□□ -1
CCDC171-203ENST00000449575 GGT2P36268 569 aa8.83□□□□□ -1
CCDC171-203ENST00000449575 SLC1A3P43003 542 aa8.83□□□□□ -1
CCDC171-203ENST00000449575 SLC6A8P48029 635 aa8.83□□□□□ -1
CCDC171-203ENST00000449575 PER3P56645 1201 aa8.83□□□□□ -1
CCDC171-203ENST00000449575 OR1Q1Q15612 314 aa8.83□□□□□ -1
CCDC171-203ENST00000449575 ZNF79Q15937 498 aa8.83□□□□□ -1
CCDC171-203ENST00000449575 TATDN3Q17R31 274 aa8.83□□□□□ -1
CCDC171-203ENST00000449575 ENTPD8Q5MY95 495 aa8.83□□□□□ -1
CCDC171-203ENST00000449575 LAMTOR1Q6IAA8 161 aa8.83□□□□□ -1
CCDC171-203ENST00000449575 WDR88Q6ZMY6 472 aa8.83□□□□□ -1
CCDC171-203ENST00000449575 DEF8Q6ZN54 512 aa8.83□□□□□ -1
CCDC171-203ENST00000449575 FAM57AQ8TBR7 257 aa8.83□□□□□ -1
CCDC171-203ENST00000449575 ST8SIA1Q92185 356 aa8.83□□□□□ -1
CCDC171-203ENST00000449575 MRGPRX4Q96LA9 322 aa8.83□□□□□ -1
CCDC171-203ENST00000449575 ASPNQ9BXN1 380 aa8.83□□□□□ -1
CCDC171-203ENST00000449575 VNN3Q9NY84 501 aa8.83□□□□□ -1
CCDC171-203ENST00000449575 RHCGQ9UBD6 479 aa8.83□□□□□ -1
CCDC171-203ENST00000449575 SLC23A1Q9UHI7 598 aa8.83□□□□□ -1
CCDC171-203ENST00000449575 SLC13A4Q9UKG4 626 aa8.83□□□□□ -1
CCDC171-203ENST00000449575 SAMHD1Q9Y3Z3 626 aaKnown RBP8.83□□□□□ -1
CCDC171-203ENST00000449575 LRRK2Q5S007 2527 aa8.82□□□□□ -1
CCDC171-203ENST00000449575 TMED7-TICAM2A0A0A6YYA0 188 aa8.82□□□□□ -1
CCDC171-203ENST00000449575 TRGV8A0A0C4DH27 118 aa8.82□□□□□ -1
CCDC171-203ENST00000449575 TMEM72A0PK05 275 aa8.82□□□□□ -1
CCDC171-203ENST00000449575 TNFSF11O14788 317 aa8.82□□□□□ -1
CCDC171-203ENST00000449575 TSPAN4O14817 238 aa8.82□□□□□ -1
CCDC171-203ENST00000449575 NDUFA2O43678 99 aa8.82□□□□□ -1
CCDC171-203ENST00000449575 DIRAS1O95057 198 aa8.82□□□□□ -1
CCDC171-203ENST00000449575 HSMCR30P0CW71 290 aa8.82□□□□□ -1
CCDC171-203ENST00000449575 ZNF17P17021 662 aa8.82□□□□□ -1
CCDC171-203ENST00000449575 RRAS2P62070 204 aaPredicted RBP8.82□□□□□ -1
CCDC171-203ENST00000449575 SNRPD2P62316 118 aaKnown RBP8.82□□□□□ -1
CCDC171-203ENST00000449575 VLDLRP98155 873 aa8.82□□□□□ -1
CCDC171-203ENST00000449575 PIN1Q13526 163 aaPredicted RBP8.82□□□□□ -1
CCDC171-203ENST00000449575 TMEM176BQ3YBM2 270 aaPredicted RBP8.82□□□□□ -1
CCDC171-203ENST00000449575 GLYR1Q49A26 553 aaPredicted RBP8.82□□□□□ -1
CCDC171-203ENST00000449575 TMEM65Q6PI78 240 aa8.82□□□□□ -1
CCDC171-203ENST00000449575 GRINAQ7Z429 371 aa8.82□□□□□ -1
CCDC171-203ENST00000449575 ZNF440Q8IYI8 595 aa8.82□□□□□ -1
CCDC171-203ENST00000449575 OR4M2Q8NGB6 313 aa8.82□□□□□ -1
CCDC171-203ENST00000449575 PRDM14Q9GZV8 571 aa8.82□□□□□ -1
CCDC171-203ENST00000449575 KLHL28Q9NXS3 571 aa8.82□□□□□ -1
CCDC171-203ENST00000449575 STUB1Q9UNE7 303 aa8.82□□□□□ -1
CCDC171-203ENST00000449575 TMED7Q9Y3B3 224 aa8.82□□□□□ -1
CCDC171-203ENST00000449575 FAM215AQ9Y5M1 114 aa8.82□□□□□ -1
CCDC171-203ENST00000449575 A0A1W2PRG6 482 aa8.82□□□□□ -1
CCDC171-203ENST00000449575 OR14I1A6ND48 311 aa8.82□□□□□ -1
CCDC171-203ENST00000449575 FAAHO00519 579 aa8.82□□□□□ -1
CCDC171-203ENST00000449575 EIF1AYO14602 144 aaKnown RBP8.82□□□□□ -1
CCDC171-203ENST00000449575 FFAR1O14842 300 aa8.82□□□□□ -1
CCDC171-203ENST00000449575 ORC5O43913 435 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms