RNA–Protein interactions for RNA: ENST00000449510.6

UBE3B-204, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,771 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-204ENST00000449510 PRSS41Q7RTY9 318 aa11.35□□□□□ -0.59
UBE3B-204ENST00000449510 OR51Q1Q8NH59 317 aa11.35□□□□□ -0.59
UBE3B-204ENST00000449510 USB1Q9BQ65 265 aaKnown RBP11.35□□□□□ -0.59
UBE3B-204ENST00000449510 NUDT22Q9BRQ3 303 aa11.35□□□□□ -0.59
UBE3B-204ENST00000449510 IFT22Q9H7X7 185 aa11.35□□□□□ -0.59
UBE3B-204ENST00000449510 ADGRL4Q9HBW9 690 aa11.35□□□□□ -0.59
UBE3B-204ENST00000449510 APMAPQ9HDC9 416 aa11.35□□□□□ -0.59
UBE3B-204ENST00000449510 SIGLEC7Q9Y286 467 aa11.35□□□□□ -0.59
UBE3B-204ENST00000449510 CSAG2Q9Y5P2 127 aa11.35□□□□□ -0.59
UBE3B-204ENST00000449510 C2orf72A6NCS6 295 aa11.35□□□□□ -0.59
UBE3B-204ENST00000449510 H0Y8X5 98 aa11.35□□□□□ -0.59
UBE3B-204ENST00000449510 WRBO00258 174 aa11.35□□□□□ -0.59
UBE3B-204ENST00000449510 CEBPBP17676 345 aa11.35□□□□□ -0.59
UBE3B-204ENST00000449510 CNR1P21554 472 aa11.35□□□□□ -0.59
UBE3B-204ENST00000449510 NDUFS1P28331 727 aa11.35□□□□□ -0.59
UBE3B-204ENST00000449510 CAMLGP49069 296 aa11.35□□□□□ -0.59
UBE3B-204ENST00000449510 ATP1B3P54709 279 aa11.35□□□□□ -0.59
UBE3B-204ENST00000449510 CLDN6P56747 220 aa11.35□□□□□ -0.59
UBE3B-204ENST00000449510 IRF4Q15306 451 aa11.35□□□□□ -0.59
UBE3B-204ENST00000449510 ABCA11PQ4W5N1 156 aa11.35□□□□□ -0.59
UBE3B-204ENST00000449510 OR2W3Q7Z3T1 314 aa11.35□□□□□ -0.59
UBE3B-204ENST00000449510 ISOC2Q96AB3 205 aa11.35□□□□□ -0.59
UBE3B-204ENST00000449510 NECAB3Q96P71 396 aaPredicted RBP11.35□□□□□ -0.59
UBE3B-204ENST00000449510 DNAJC5Q9H3Z4 198 aa11.35□□□□□ -0.59
UBE3B-204ENST00000449510 PRTFDC1Q9NRG1 225 aa11.35□□□□□ -0.59
UBE3B-204ENST00000449510 LRIT1Q9P2V4 623 aa11.35□□□□□ -0.59
UBE3B-204ENST00000449510 ZNF223Q9UK11 482 aaPredicted RBP11.35□□□□□ -0.59
UBE3B-204ENST00000449510 MAFFQ9ULX9 164 aa11.35□□□□□ -0.59
UBE3B-204ENST00000449510 EMC9Q9Y3B6 208 aa11.35□□□□□ -0.59
UBE3B-204ENST00000449510 RBM7Q9Y580 266 aaKnown RBP11.35□□□□□ -0.59
UBE3B-204ENST00000449510 MGAMO43451 1857 aa11.34□□□□□ -0.59
UBE3B-204ENST00000449510 DSPPQ9NZW4 1301 aa11.34□□□□□ -0.59
UBE3B-204ENST00000449510 C4orf47A7E2U8 309 aa11.34□□□□□ -0.59
UBE3B-204ENST00000449510 H0YGG7 62 aa11.34□□□□□ -0.59
UBE3B-204ENST00000449510 SDCBPO00560 298 aaPredicted RBP11.34□□□□□ -0.59
UBE3B-204ENST00000449510 SRPX2O60687 465 aaPredicted RBP11.34□□□□□ -0.59
UBE3B-204ENST00000449510 IFNA21P01568 189 aa11.34□□□□□ -0.59
UBE3B-204ENST00000449510 RAB2AP61019 212 aa11.34□□□□□ -0.59
UBE3B-204ENST00000449510 ARF3P61204 181 aaPredicted RBP11.34□□□□□ -0.59
UBE3B-204ENST00000449510 MESP2Q0VG99 397 aa11.34□□□□□ -0.59
UBE3B-204ENST00000449510 CST6Q15828 149 aa11.34□□□□□ -0.59
UBE3B-204ENST00000449510 C14orf28Q4W4Y0 310 aa11.34□□□□□ -0.59
UBE3B-204ENST00000449510 CORO6Q6QEF8 472 aa11.34□□□□□ -0.59
UBE3B-204ENST00000449510 NAA40Q86UY6 237 aa11.34□□□□□ -0.59
UBE3B-204ENST00000449510 ETFBKMTQ8IXQ9 262 aa11.34□□□□□ -0.59
UBE3B-204ENST00000449510 GABRG1Q8N1C3 465 aa11.34□□□□□ -0.59
UBE3B-204ENST00000449510 KCNRGQ8N5I3 272 aa11.34□□□□□ -0.59
UBE3B-204ENST00000449510 OR2AJ1Q8NGZ0 328 aa11.34□□□□□ -0.59
UBE3B-204ENST00000449510 SLC41A2Q96JW4 573 aa11.34□□□□□ -0.59
UBE3B-204ENST00000449510 KCNJ15Q99712 375 aa11.34□□□□□ -0.59
UBE3B-204ENST00000449510 SLC17A9Q9BYT1 436 aa11.34□□□□□ -0.59
UBE3B-204ENST00000449510 PCYT1BQ9Y5K3 369 aaPredicted RBP11.34□□□□□ -0.59
UBE3B-204ENST00000449510 COL11A2P13942 1736 aaPredicted RBP11.34□□□□□ -0.59
UBE3B-204ENST00000449510 KAT7O95251 611 aa11.34□□□□□ -0.59
UBE3B-204ENST00000449510 HOXB9P17482 250 aaPredicted RBP11.34□□□□□ -0.59
UBE3B-204ENST00000449510 OMGP23515 440 aa11.34□□□□□ -0.59
UBE3B-204ENST00000449510 NFYBP25208 207 aa11.34□□□□□ -0.59
UBE3B-204ENST00000449510 ZP1P60852 638 aa11.34□□□□□ -0.59
UBE3B-204ENST00000449510 ARHGAP19Q14CB8 494 aa11.34□□□□□ -0.59
UBE3B-204ENST00000449510 GUCA2BQ16661 112 aa11.34□□□□□ -0.59
UBE3B-204ENST00000449510 OR2M4Q96R27 311 aa11.34□□□□□ -0.59
UBE3B-204ENST00000449510 ZNF304Q9HCX3 659 aa11.34□□□□□ -0.59
UBE3B-204ENST00000449510 OPN4Q9UHM6 478 aa11.34□□□□□ -0.59
UBE3B-204ENST00000449510 TMEM14AQ9Y6G1 99 aa11.34□□□□□ -0.59
UBE3B-204ENST00000449510 NQO2P16083 231 aa11.33□□□□□ -0.59
UBE3B-204ENST00000449510 EMDP50402 254 aa11.33□□□□□ -0.59
UBE3B-204ENST00000449510 MRPS10P82664 201 aaKnown RBP11.33□□□□□ -0.59
UBE3B-204ENST00000449510 METRNLQ641Q3 311 aa11.33□□□□□ -0.59
UBE3B-204ENST00000449510 NUP54Q7Z3B4 507 aa11.33□□□□□ -0.59
UBE3B-204ENST00000449510 C12orf40Q86WS4 652 aa11.33□□□□□ -0.59
UBE3B-204ENST00000449510 PNLDC1Q8NA58 520 aaKnown RBP11.33□□□□□ -0.59
UBE3B-204ENST00000449510 OR5T1Q8NG75 326 aa11.33□□□□□ -0.59
UBE3B-204ENST00000449510 OR51A4Q8NGJ6 313 aa11.33□□□□□ -0.59
UBE3B-204ENST00000449510 WFIKKN2Q8TEU8 576 aa11.33□□□□□ -0.59
UBE3B-204ENST00000449510 TMEM106CQ9BVX2 250 aa11.33□□□□□ -0.59
UBE3B-204ENST00000449510 SLCO1C1Q9NYB5 712 aa11.33□□□□□ -0.59
UBE3B-204ENST00000449510 MSRAQ9UJ68 235 aa11.33□□□□□ -0.59
UBE3B-204ENST00000449510 RBBP6Q7Z6E9 1792 aaKnown RBP11.33□□□□□ -0.59
UBE3B-204ENST00000449510 CHD5Q8TDI0 1954 aa11.33□□□□□ -0.6
UBE3B-204ENST00000449510 CEP250Q9BV73 2442 aa11.33□□□□□ -0.6
UBE3B-204ENST00000449510 OR6C68A6NDL8 312 aa11.33□□□□□ -0.6
UBE3B-204ENST00000449510 NDUFB6O95139 128 aa11.33□□□□□ -0.6
UBE3B-204ENST00000449510 GPR75O95800 540 aa11.33□□□□□ -0.6
UBE3B-204ENST00000449510 ERCC1P07992 297 aaPredicted RBP11.33□□□□□ -0.6
UBE3B-204ENST00000449510 OR8U9P0C7N5 309 aa11.33□□□□□ -0.6
UBE3B-204ENST00000449510 HTR2CP28335 458 aa11.33□□□□□ -0.6
UBE3B-204ENST00000449510 PXNP49023 591 aaPredicted RBP11.33□□□□□ -0.6
UBE3B-204ENST00000449510 CSNK2A1P68400 391 aaPredicted RBP11.33□□□□□ -0.6
UBE3B-204ENST00000449510 SPIN3Q5JUX0 258 aa11.33□□□□□ -0.6
UBE3B-204ENST00000449510 Q6ZNB5 142 aa11.33□□□□□ -0.6
UBE3B-204ENST00000449510 ARIH2OSQ8N7S6 290 aa11.33□□□□□ -0.6
UBE3B-204ENST00000449510 HSD17B11Q8NBQ5 300 aa11.33□□□□□ -0.6
UBE3B-204ENST00000449510 CSNK2A3Q8NEV1 391 aa11.33□□□□□ -0.6
UBE3B-204ENST00000449510 OR4K17Q8NGC6 315 aa11.33□□□□□ -0.6
UBE3B-204ENST00000449510 SFXN5Q8TD22 340 aa11.33□□□□□ -0.6
UBE3B-204ENST00000449510 MCOLN1Q9GZU1 580 aa11.33□□□□□ -0.6
UBE3B-204ENST00000449510 BANF2Q9H503 90 aa11.33□□□□□ -0.6
UBE3B-204ENST00000449510 KCNG2Q9UJ96 466 aa11.33□□□□□ -0.6
UBE3B-204ENST00000449510 C17orf113A0A1B0GUU1 675 aa11.33□□□□□ -0.6
UBE3B-204ENST00000449510 TMEM269A0A1B0GVZ9 245 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms