RNA–Protein interactions for RNA: ENST00000448940.5

CDC42BPA-209, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 7,355 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-209ENST00000448940 LSM11P83369 360 aaKnown RBP eCLIP5.09□□□□□ -1.59
CDC42BPA-209ENST00000448940 ZNF829Q3KNS6 432 aaPredicted RBP5.09□□□□□ -1.59
CDC42BPA-209ENST00000448940 PEAR1Q5VY43 1037 aaPredicted RBP5.09□□□□□ -1.59
CDC42BPA-209ENST00000448940 OR4C13Q8NGP0 309 aa5.09□□□□□ -1.59
CDC42BPA-209ENST00000448940 SFXN3Q9BWM7 321 aa5.09□□□□□ -1.59
CDC42BPA-209ENST00000448940 CLN8Q9UBY8 286 aa5.09□□□□□ -1.59
CDC42BPA-209ENST00000448940 TMEFF2Q9UIK5 374 aaPredicted RBP5.09□□□□□ -1.59
CDC42BPA-209ENST00000448940 SIPA1L1O43166 1804 aa5.09□□□□□ -1.59
CDC42BPA-209ENST00000448940 MED13LQ71F56 2210 aa5.09□□□□□ -1.59
CDC42BPA-209ENST00000448940 TMPRSS11DO60235 418 aa5.09□□□□□ -1.59
CDC42BPA-209ENST00000448940 FOXO1Q12778 655 aa5.09□□□□□ -1.59
CDC42BPA-209ENST00000448940 MAP4K2Q12851 820 aa5.09□□□□□ -1.59
CDC42BPA-209ENST00000448940 EIF2B1Q14232 305 aaKnown RBP5.09□□□□□ -1.59
CDC42BPA-209ENST00000448940 ATP6AP1Q15904 470 aa5.09□□□□□ -1.59
CDC42BPA-209ENST00000448940 SIMC1Q8NDZ2 872 aa5.09□□□□□ -1.59
CDC42BPA-209ENST00000448940 OR10D3Q8NH80 312 aa5.09□□□□□ -1.59
CDC42BPA-209ENST00000448940 LAT2Q9GZY6 243 aa5.09□□□□□ -1.59
CDC42BPA-209ENST00000448940 TMEM165Q9HC07 324 aa5.09□□□□□ -1.59
CDC42BPA-209ENST00000448940 GALNT9Q9HCQ5 603 aa5.09□□□□□ -1.59
CDC42BPA-209ENST00000448940 VNN3Q9NY84 501 aa5.09□□□□□ -1.59
CDC42BPA-209ENST00000448940 TCRBV16S1A1N1A0A5B0 115 aa5.09□□□□□ -1.59
CDC42BPA-209ENST00000448940 CDKN1AP38936 164 aa5.09□□□□□ -1.59
CDC42BPA-209ENST00000448940 GYS2P54840 703 aa5.09□□□□□ -1.59
CDC42BPA-209ENST00000448940 RIPPLY3P57055 190 aa5.09□□□□□ -1.59
CDC42BPA-209ENST00000448940 ERVK-16P61578 105 aa5.09□□□□□ -1.59
CDC42BPA-209ENST00000448940 PCLAFQ15004 111 aa5.09□□□□□ -1.59
CDC42BPA-209ENST00000448940 PPP1R3AQ16821 1122 aa5.09□□□□□ -1.59
CDC42BPA-209ENST00000448940 AVPI1Q5T686 147 aa5.09□□□□□ -1.59
CDC42BPA-209ENST00000448940 PLEKHG7Q6ZR37 379 aa5.09□□□□□ -1.59
CDC42BPA-209ENST00000448940 SLC35D2Q76EJ3 337 aa5.09□□□□□ -1.59
CDC42BPA-209ENST00000448940 DPPA2Q7Z7J5 298 aa5.09□□□□□ -1.59
CDC42BPA-209ENST00000448940 OR4D6Q8NGJ1 314 aa5.09□□□□□ -1.59
CDC42BPA-209ENST00000448940 GRPEL2Q8TAA5 225 aa5.09□□□□□ -1.59
CDC42BPA-209ENST00000448940 FAM57AQ8TBR7 257 aa5.09□□□□□ -1.59
CDC42BPA-209ENST00000448940 SLC41A3Q96GZ6 507 aa5.09□□□□□ -1.59
CDC42BPA-209ENST00000448940 CCDC115Q96NT0 180 aa5.09□□□□□ -1.59
CDC42BPA-209ENST00000448940 HINT3Q9NQE9 182 aaKnown RBP5.09□□□□□ -1.59
CDC42BPA-209ENST00000448940 MRPL39Q9NYK5 338 aaKnown RBP5.09□□□□□ -1.59
CDC42BPA-209ENST00000448940 ZNF732B4DXR9 585 aa5.09□□□□□ -1.6
CDC42BPA-209ENST00000448940 PRKNO60260 465 aaPredicted RBP5.09□□□□□ -1.6
CDC42BPA-209ENST00000448940 AKR7A3O95154 331 aa5.09□□□□□ -1.6
CDC42BPA-209ENST00000448940 DEFA1P59665 94 aa5.09□□□□□ -1.6
CDC42BPA-209ENST00000448940 DEFA3P59666 94 aa5.09□□□□□ -1.6
CDC42BPA-209ENST00000448940 SLC25A3Q00325 362 aa5.09□□□□□ -1.6
CDC42BPA-209ENST00000448940 LY6EQ16553 131 aa5.09□□□□□ -1.6
CDC42BPA-209ENST00000448940 MOB3CQ70IA8 216 aa5.09□□□□□ -1.6
CDC42BPA-209ENST00000448940 PGAP1Q75T13 922 aa5.09□□□□□ -1.6
CDC42BPA-209ENST00000448940 BNIPLQ7Z465 357 aa5.09□□□□□ -1.6
CDC42BPA-209ENST00000448940 MKXQ8IYA7 352 aa5.09□□□□□ -1.6
CDC42BPA-209ENST00000448940 MAPK1IP1LQ8NDC0 245 aa5.09□□□□□ -1.6
CDC42BPA-209ENST00000448940 OR10G2Q8NGC3 310 aa5.09□□□□□ -1.6
CDC42BPA-209ENST00000448940 TXNDC15Q96J42 360 aa5.09□□□□□ -1.6
CDC42BPA-209ENST00000448940 SPSB2Q99619 263 aa5.09□□□□□ -1.6
CDC42BPA-209ENST00000448940 ZNF442Q9H7R0 627 aa5.09□□□□□ -1.6
CDC42BPA-209ENST00000448940 TBCCD1Q9NVR7 557 aa5.09□□□□□ -1.6
CDC42BPA-209ENST00000448940 TOR4AQ9NXH8 423 aa5.09□□□□□ -1.6
CDC42BPA-209ENST00000448940 MYEF2Q9P2K5 600 aaKnown RBP5.09□□□□□ -1.6
CDC42BPA-209ENST00000448940 RAB21Q9UL25 225 aa5.09□□□□□ -1.6
CDC42BPA-209ENST00000448940 J3QRK9 145 aa5.08□□□□□ -1.6
CDC42BPA-209ENST00000448940 SLC22A2O15244 555 aa5.08□□□□□ -1.6
CDC42BPA-209ENST00000448940 NPPAP01160 153 aa5.08□□□□□ -1.6
CDC42BPA-209ENST00000448940 MYL9P24844 172 aa5.08□□□□□ -1.6
CDC42BPA-209ENST00000448940 GBX2P52951 348 aaPredicted RBP5.08□□□□□ -1.6
CDC42BPA-209ENST00000448940 VBP1P61758 197 aa5.08□□□□□ -1.6
CDC42BPA-209ENST00000448940 RSU1Q15404 277 aa5.08□□□□□ -1.6
CDC42BPA-209ENST00000448940 CDCP2Q5VXM1 449 aa5.08□□□□□ -1.6
CDC42BPA-209ENST00000448940 PRSS41Q7RTY9 318 aa5.08□□□□□ -1.6
CDC42BPA-209ENST00000448940 ERI1Q8IV48 349 aaKnown RBP5.08□□□□□ -1.6
CDC42BPA-209ENST00000448940 DHRSXQ8N5I4 330 aa5.08□□□□□ -1.6
CDC42BPA-209ENST00000448940 NEIL3Q8TAT5 605 aa5.08□□□□□ -1.6
CDC42BPA-209ENST00000448940 WNT2BQ93097 391 aa5.08□□□□□ -1.6
CDC42BPA-209ENST00000448940 CYSLTR2Q9NS75 346 aa5.08□□□□□ -1.6
CDC42BPA-209ENST00000448940 GNG12Q9UBI6 72 aa5.08□□□□□ -1.6
CDC42BPA-209ENST00000448940 SLC7A7Q9UM01 511 aa5.08□□□□□ -1.6
CDC42BPA-209ENST00000448940 TRAPPC2LH3BP13 241 aa5.08□□□□□ -1.6
CDC42BPA-209ENST00000448940 CCL3P10147 92 aa5.08□□□□□ -1.6
CDC42BPA-209ENST00000448940 GRPRP30550 384 aa5.08□□□□□ -1.6
CDC42BPA-209ENST00000448940 PLAURQ03405 335 aa5.08□□□□□ -1.6
CDC42BPA-209ENST00000448940 P2RY6Q15077 328 aa5.08□□□□□ -1.6
CDC42BPA-209ENST00000448940 KANK2Q63ZY3 851 aa5.08□□□□□ -1.6
CDC42BPA-209ENST00000448940 MINDY2Q8NBR6 621 aa5.08□□□□□ -1.6
CDC42BPA-209ENST00000448940 GNPDA2Q8TDQ7 276 aa5.08□□□□□ -1.6
CDC42BPA-209ENST00000448940 HSH2DQ96JZ2 352 aa5.08□□□□□ -1.6
CDC42BPA-209ENST00000448940 EGLN2Q96KS0 407 aa5.08□□□□□ -1.6
CDC42BPA-209ENST00000448940 DUX5Q96PT3 197 aa5.08□□□□□ -1.6
CDC42BPA-209ENST00000448940 CHRNA10Q9GZZ6 450 aa5.08□□□□□ -1.6
CDC42BPA-209ENST00000448940 ZKSCAN7Q9P0L1 754 aaPredicted RBP5.08□□□□□ -1.6
CDC42BPA-209ENST00000448940 PITPNC1Q9UKF7 332 aa5.08□□□□□ -1.6
CDC42BPA-209ENST00000448940 BAIAP2Q9UQB8 552 aa5.08□□□□□ -1.6
CDC42BPA-209ENST00000448940 GPR52Q9Y2T5 361 aa5.08□□□□□ -1.6
CDC42BPA-209ENST00000448940 MSTNO14793 375 aa5.08□□□□□ -1.6
CDC42BPA-209ENST00000448940 TP73O15350 636 aa5.08□□□□□ -1.6
CDC42BPA-209ENST00000448940 MPZL2O60487 215 aa5.08□□□□□ -1.6
CDC42BPA-209ENST00000448940 CRHP06850 196 aa5.08□□□□□ -1.6
CDC42BPA-209ENST00000448940 CD79BP40259 229 aa5.08□□□□□ -1.6
CDC42BPA-209ENST00000448940 GCGRP47871 477 aa5.08□□□□□ -1.6
CDC42BPA-209ENST00000448940 ATP4BP51164 291 aa5.08□□□□□ -1.6
CDC42BPA-209ENST00000448940 CAV3P56539 151 aa5.08□□□□□ -1.6
CDC42BPA-209ENST00000448940 ZNF92Q03936 586 aa5.08□□□□□ -1.6
CDC42BPA-209ENST00000448940 EBPQ15125 230 aaKnown RBP5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms