RNA–Protein interactions for RNA: ENST00000447345.5

RFC4-208, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 785 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-208ENST00000447345 PGBD2Q6P3X8 592 aa10.41□□□□□ -0.74
RFC4-208ENST00000447345 TMEM108Q6UXF1 575 aa10.41□□□□□ -0.74
RFC4-208ENST00000447345 OR4C15Q8NGM1 316 aa10.41□□□□□ -0.74
RFC4-208ENST00000447345 ZNF519Q8TB69 540 aa10.41□□□□□ -0.74
RFC4-208ENST00000447345 NSMAFQ92636 917 aa10.41□□□□□ -0.74
RFC4-208ENST00000447345 AKAP1Q92667 903 aaKnown RBP eCLIP10.41□□□□□ -0.74
RFC4-208ENST00000447345 MCHR2Q969V1 340 aa10.41□□□□□ -0.74
RFC4-208ENST00000447345 RASD2Q96D21 266 aa10.41□□□□□ -0.74
RFC4-208ENST00000447345 Q96M85 177 aa10.41□□□□□ -0.74
RFC4-208ENST00000447345 ZNF570Q96NI8 536 aa10.41□□□□□ -0.74
RFC4-208ENST00000447345 TMEM204Q9BSN7 226 aa10.41□□□□□ -0.74
RFC4-208ENST00000447345 SEC61A2Q9H9S3 476 aa10.41□□□□□ -0.74
RFC4-208ENST00000447345 STX18Q9P2W9 335 aaKnown RBP10.41□□□□□ -0.74
RFC4-208ENST00000447345 GRHPRQ9UBQ7 328 aa10.41□□□□□ -0.74
RFC4-208ENST00000447345 POU2F3Q9UKI9 436 aa10.41□□□□□ -0.74
RFC4-208ENST00000447345 MAGED1Q9Y5V3 778 aaPredicted RBP10.41□□□□□ -0.74
RFC4-208ENST00000447345 OTOGQ6ZRI0 2925 aa10.4□□□□□ -0.74
RFC4-208ENST00000447345 ARPC4-TTLL3A0A0A6YYG9 625 aa10.4□□□□□ -0.74
RFC4-208ENST00000447345 NPIPB13A6NJU9 1138 aa10.4□□□□□ -0.74
RFC4-208ENST00000447345 NPIPB4C9JG80 1138 aa10.4□□□□□ -0.74
RFC4-208ENST00000447345 SOCS2O14508 198 aa10.4□□□□□ -0.74
RFC4-208ENST00000447345 GNGT2O14610 69 aa10.4□□□□□ -0.74
RFC4-208ENST00000447345 ARHGEF9O43307 516 aa10.4□□□□□ -0.74
RFC4-208ENST00000447345 DHHO43323 396 aa10.4□□□□□ -0.74
RFC4-208ENST00000447345 CST1P01037 141 aa10.4□□□□□ -0.74
RFC4-208ENST00000447345 HLA-HP01893 362 aa10.4□□□□□ -0.74
RFC4-208ENST00000447345 RAF1P04049 648 aa10.4□□□□□ -0.74
RFC4-208ENST00000447345 CD14P08571 375 aa10.4□□□□□ -0.74
RFC4-208ENST00000447345 CELA3BP08861 270 aa10.4□□□□□ -0.74
RFC4-208ENST00000447345 CD79AP11912 226 aa10.4□□□□□ -0.74
RFC4-208ENST00000447345 DNASE1P24855 282 aa10.4□□□□□ -0.74
RFC4-208ENST00000447345 FPR3P25089 353 aa10.4□□□□□ -0.74
RFC4-208ENST00000447345 CD40P25942 277 aa10.4□□□□□ -0.74
RFC4-208ENST00000447345 ZNF84P51523 738 aa10.4□□□□□ -0.74
RFC4-208ENST00000447345 IDH3GP51553 393 aaPredicted RBP10.4□□□□□ -0.74
RFC4-208ENST00000447345 IST1P53990 364 aa10.4□□□□□ -0.74
RFC4-208ENST00000447345 CDH11P55287 796 aa10.4□□□□□ -0.74
RFC4-208ENST00000447345 PIGFQ07326 219 aa10.4□□□□□ -0.74
RFC4-208ENST00000447345 TAF11Q15544 211 aa10.4□□□□□ -0.74
RFC4-208ENST00000447345 MESTQ5EB52 335 aa10.4□□□□□ -0.74
RFC4-208ENST00000447345 C1orf146Q5VVC0 180 aa10.4□□□□□ -0.74
RFC4-208ENST00000447345 LRFN4Q6PJG9 635 aa10.4□□□□□ -0.74
RFC4-208ENST00000447345 SMARCD3Q6STE5 483 aa10.4□□□□□ -0.74
RFC4-208ENST00000447345 SLC22A25Q6T423 547 aa10.4□□□□□ -0.74
RFC4-208ENST00000447345 SSX8Q7RTT4 187 aa10.4□□□□□ -0.74
RFC4-208ENST00000447345 MDP1Q86V88 176 aa10.4□□□□□ -0.74
RFC4-208ENST00000447345 MYPOPQ86VE0 399 aaPredicted RBP10.4□□□□□ -0.74
RFC4-208ENST00000447345 AQP11Q8NBQ7 271 aa10.4□□□□□ -0.74
RFC4-208ENST00000447345 GNPDA2Q8TDQ7 276 aa10.4□□□□□ -0.74
RFC4-208ENST00000447345 POP5Q969H6 163 aaKnown RBP10.4□□□□□ -0.74
RFC4-208ENST00000447345 GTPBP3Q969Y2 492 aaKnown RBP10.4□□□□□ -0.74
RFC4-208ENST00000447345 RADILQ96JH8 1075 aa10.4□□□□□ -0.74
RFC4-208ENST00000447345 MRPL13Q9BYD1 178 aaKnown RBP10.4□□□□□ -0.74
RFC4-208ENST00000447345 OR52D1Q9H346 318 aa10.4□□□□□ -0.74
RFC4-208ENST00000447345 EGLN3Q9H6Z9 239 aa10.4□□□□□ -0.74
RFC4-208ENST00000447345 NOX3Q9HBY0 568 aa10.4□□□□□ -0.74
RFC4-208ENST00000447345 OBP2BQ9NPH6 170 aa10.4□□□□□ -0.74
RFC4-208ENST00000447345 TMEM38BQ9NVV0 291 aa10.4□□□□□ -0.74
RFC4-208ENST00000447345 IGKV1D-43A0A0B4J1Z2 117 aa10.39□□□□□ -0.75
RFC4-208ENST00000447345 IGHV1-18A0A0C4DH31 117 aa10.39□□□□□ -0.75
RFC4-208ENST00000447345 A0A1W2PPL8 197 aa10.39□□□□□ -0.75
RFC4-208ENST00000447345 TCRBV3S1A0A5B6 114 aa10.39□□□□□ -0.75
RFC4-208ENST00000447345 A6NIZ1 184 aa10.39□□□□□ -0.75
RFC4-208ENST00000447345 ATP6V1G2-DDX39BF2Z307 99 aa10.39□□□□□ -0.75
RFC4-208ENST00000447345 EBAG9O00559 213 aa10.39□□□□□ -0.75
RFC4-208ENST00000447345 XKRYO14609 159 aa10.39□□□□□ -0.75
RFC4-208ENST00000447345 HS3ST1O14792 307 aa10.39□□□□□ -0.75
RFC4-208ENST00000447345 FKBP6O75344 327 aa10.39□□□□□ -0.75
RFC4-208ENST00000447345 PTP4A3O75365 173 aa10.39□□□□□ -0.75
RFC4-208ENST00000447345 CIB2O75838 187 aa10.39□□□□□ -0.75
RFC4-208ENST00000447345 ATE1O95260 518 aa10.39□□□□□ -0.75
RFC4-208ENST00000447345 PATE4P0C8F1 98 aa10.39□□□□□ -0.75
RFC4-208ENST00000447345 PTAFRP25105 342 aa10.39□□□□□ -0.75
RFC4-208ENST00000447345 CDAP32320 146 aa10.39□□□□□ -0.75
RFC4-208ENST00000447345 PTDSS1P48651 473 aaKnown RBP10.39□□□□□ -0.75
RFC4-208ENST00000447345 RAP1BP61224 184 aa10.39□□□□□ -0.75
RFC4-208ENST00000447345 RAP1AP62834 184 aa10.39□□□□□ -0.75
RFC4-208ENST00000447345 KRR1Q13601 381 aaKnown RBP10.39□□□□□ -0.75
RFC4-208ENST00000447345 HIST3H3Q16695 136 aa10.39□□□□□ -0.75
RFC4-208ENST00000447345 FAM205BPQ63HN1 556 aa10.39□□□□□ -0.75
RFC4-208ENST00000447345 C1orf94Q6P1W5 598 aa10.39□□□□□ -0.75
RFC4-208ENST00000447345 B3GLCTQ6Y288 498 aa10.39□□□□□ -0.75
RFC4-208ENST00000447345 FAM122BQ7Z309 247 aa10.39□□□□□ -0.75
RFC4-208ENST00000447345 SLC22A24Q8N4F4 322 aa10.39□□□□□ -0.75
RFC4-208ENST00000447345 ARIH2OSQ8N7S6 290 aa10.39□□□□□ -0.75
RFC4-208ENST00000447345 OR10G2Q8NGC3 310 aa10.39□□□□□ -0.75
RFC4-208ENST00000447345 LILRB1Q8NHL6 650 aaPredicted RBP10.39□□□□□ -0.75
RFC4-208ENST00000447345 MAGEE2Q8TD90 523 aaPredicted RBP10.39□□□□□ -0.75
RFC4-208ENST00000447345 NANOS1Q8WY41 292 aaKnown RBP10.39□□□□□ -0.75
RFC4-208ENST00000447345 SAMD8Q96LT4 415 aa10.39□□□□□ -0.75
RFC4-208ENST00000447345 SLC38A2Q96QD8 506 aa10.39□□□□□ -0.75
RFC4-208ENST00000447345 KCNK17Q96T54 332 aa10.39□□□□□ -0.75
RFC4-208ENST00000447345 CCL19Q99731 98 aa10.39□□□□□ -0.75
RFC4-208ENST00000447345 SH3GL3Q99963 347 aa10.39□□□□□ -0.75
RFC4-208ENST00000447345 IFT27Q9BW83 186 aa10.39□□□□□ -0.75
RFC4-208ENST00000447345 RERGLQ9H628 205 aa10.39□□□□□ -0.75
RFC4-208ENST00000447345 DENND2DQ9H6A0 471 aaPredicted RBP10.39□□□□□ -0.75
RFC4-208ENST00000447345 MOKQ9UQ07 419 aa10.39□□□□□ -0.75
RFC4-208ENST00000447345 IER3IP1Q9Y5U9 82 aa10.39□□□□□ -0.75
RFC4-208ENST00000447345 CENPBD1B2RD01 187 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms