RNA–Protein interactions for RNA: ENST00000446877.5

PMS1-214, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 4

Gene PMS1, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-214ENST00000446877 FOXL1Q12952 345 aa20.78■□□□□ 0.92
PMS1-214ENST00000446877 HFEQ30201 348 aa20.78■□□□□ 0.92
PMS1-214ENST00000446877 REEP3Q6NUK4 255 aa20.78■□□□□ 0.92
PMS1-214ENST00000446877 RBMS3Q6XE24 437 aaKnown RBP20.78■□□□□ 0.92
PMS1-214ENST00000446877 DPPA2Q7Z7J5 298 aa20.78■□□□□ 0.92
PMS1-214ENST00000446877 RETREG3Q86VR2 466 aa20.78■□□□□ 0.92
PMS1-214ENST00000446877 GOLGA6L1Q8N7Z2 621 aa20.78■□□□□ 0.92
PMS1-214ENST00000446877 ZDHHC22Q8N966 263 aa20.78■□□□□ 0.92
PMS1-214ENST00000446877 ICA1LQ8NDH6 482 aa20.78■□□□□ 0.92
PMS1-214ENST00000446877 OR1J2Q8NGS2 313 aa20.78■□□□□ 0.92
PMS1-214ENST00000446877 TMEM54Q969K7 222 aa20.78■□□□□ 0.92
PMS1-214ENST00000446877 TSPAN32Q96QS1 320 aa20.78■□□□□ 0.92
PMS1-214ENST00000446877 SH3GL3Q99963 347 aa20.78■□□□□ 0.92
PMS1-214ENST00000446877 PAIP1Q9H074 479 aaKnown RBP20.78■□□□□ 0.92
PMS1-214ENST00000446877 WIPI2Q9Y4P8 454 aa20.78■□□□□ 0.92
PMS1-214ENST00000446877 A0A0B4J2E0 115 aa20.77■□□□□ 0.92
PMS1-214ENST00000446877 A0A1B0GX12 115 aa20.77■□□□□ 0.92
PMS1-214ENST00000446877 PRORSD1PA6NEY8 169 aa20.77■□□□□ 0.92
PMS1-214ENST00000446877 LRRN3E7EW58 273 aa20.77■□□□□ 0.92
PMS1-214ENST00000446877 C11orf98E9PRG8 122 aa20.77■□□□□ 0.92
PMS1-214ENST00000446877 UBDO15205 165 aa20.77■□□□□ 0.92
PMS1-214ENST00000446877 TPST1O60507 370 aa20.77■□□□□ 0.92
PMS1-214ENST00000446877 DEAF1O75398 565 aaPredicted RBP20.77■□□□□ 0.92
PMS1-214ENST00000446877 MT-ATP6P00846 226 aa20.77■□□□□ 0.92
PMS1-214ENST00000446877 IGHV2-5P01817 119 aa20.77■□□□□ 0.92
PMS1-214ENST00000446877 CCL2P13500 99 aa20.77■□□□□ 0.92
PMS1-214ENST00000446877 TBC1D28Q2M2D7 210 aa20.77■□□□□ 0.92
PMS1-214ENST00000446877 GCNT6Q5T4J0 391 aa20.77■□□□□ 0.92
PMS1-214ENST00000446877 SLC2A7Q6PXP3 512 aa20.77■□□□□ 0.92
PMS1-214ENST00000446877 USP51Q70EK9 711 aa20.77■□□□□ 0.92
PMS1-214ENST00000446877 COMTD1Q86VU5 262 aa20.77■□□□□ 0.92
PMS1-214ENST00000446877 OR9I1Q8NGQ6 314 aa20.77■□□□□ 0.92
PMS1-214ENST00000446877 OR5J2Q8NH18 312 aa20.77■□□□□ 0.92
PMS1-214ENST00000446877 OR6X1Q8NH79 312 aa20.77■□□□□ 0.92
PMS1-214ENST00000446877 ZNF566Q969W8 418 aa20.77■□□□□ 0.92
PMS1-214ENST00000446877 TMEM43Q9BTV4 400 aa20.77■□□□□ 0.92
PMS1-214ENST00000446877 RSPO3Q9BXY4 272 aaPredicted RBP20.77■□□□□ 0.92
PMS1-214ENST00000446877 BCL2L14Q9BZR8 327 aa20.77■□□□□ 0.92
PMS1-214ENST00000446877 ESM1Q9NQ30 184 aa20.77■□□□□ 0.92
PMS1-214ENST00000446877 TMEM38BQ9NVV0 291 aa20.77■□□□□ 0.92
PMS1-214ENST00000446877 PRSS23O95084 383 aa20.76■□□□□ 0.91
PMS1-214ENST00000446877 CDH12P55289 794 aa20.76■□□□□ 0.91
PMS1-214ENST00000446877 UCP2P55851 309 aa20.76■□□□□ 0.91
PMS1-214ENST00000446877 UBA52P62987 128 aaKnown RBP20.76■□□□□ 0.91
PMS1-214ENST00000446877 CDK6Q00534 326 aa20.76■□□□□ 0.91
PMS1-214ENST00000446877 PLP2Q04941 152 aa20.76■□□□□ 0.91
PMS1-214ENST00000446877 ZP4Q12836 540 aa20.76■□□□□ 0.91
PMS1-214ENST00000446877 SLC36A2Q495M3 483 aa20.76■□□□□ 0.91
PMS1-214ENST00000446877 SWT1Q5T5J6 900 aaKnown RBP20.76■□□□□ 0.91
PMS1-214ENST00000446877 WDR88Q6ZMY6 472 aa20.76■□□□□ 0.91
PMS1-214ENST00000446877 SLC35D2Q76EJ3 337 aa20.76■□□□□ 0.91
PMS1-214ENST00000446877 RANBP3LQ86VV4 465 aaPredicted RBP20.76■□□□□ 0.91
PMS1-214ENST00000446877 PAQR4Q8N4S7 273 aaPredicted RBP20.76■□□□□ 0.91
PMS1-214ENST00000446877 ANKRD42Q8N9B4 389 aa20.76■□□□□ 0.91
PMS1-214ENST00000446877 BHLHE22Q8NFJ8 381 aaPredicted RBP20.76■□□□□ 0.91
PMS1-214ENST00000446877 C22orf15Q8WYQ4 148 aa20.76■□□□□ 0.91
PMS1-214ENST00000446877 ZNF696Q9H7X3 374 aa20.76■□□□□ 0.91
PMS1-214ENST00000446877 SAP30LQ9HAJ7 183 aa20.76■□□□□ 0.91
PMS1-214ENST00000446877 IQCMA0A1B0GVH7 501 aa20.75■□□□□ 0.91
PMS1-214ENST00000446877 TMPRSS2O15393 492 aa20.75■□□□□ 0.91
PMS1-214ENST00000446877 SERPINB7O75635 380 aa20.75■□□□□ 0.91
PMS1-214ENST00000446877 ARAFP10398 606 aa20.75■□□□□ 0.91
PMS1-214ENST00000446877 TSTQ16762 297 aaKnown RBP20.75■□□□□ 0.91
PMS1-214ENST00000446877 CEP85LQ5SZL2 805 aa20.75■□□□□ 0.91
PMS1-214ENST00000446877 MAELQ96JY0 434 aaKnown RBP20.75■□□□□ 0.91
PMS1-214ENST00000446877 ZNF607Q96SK3 696 aa20.75■□□□□ 0.91
PMS1-214ENST00000446877 GAL3ST1Q99999 423 aa20.75■□□□□ 0.91
PMS1-214ENST00000446877 PPIAL4AQ9Y536 164 aa20.75■□□□□ 0.91
PMS1-214ENST00000446877 TRRAPQ9Y4A5 3859 aa20.74■□□□□ 0.91
PMS1-214ENST00000446877 DHHO43323 396 aa20.74■□□□□ 0.91
PMS1-214ENST00000446877 SNNO75324 88 aaPredicted RBP20.74■□□□□ 0.91
PMS1-214ENST00000446877 SNAP29O95721 258 aa20.74■□□□□ 0.91
PMS1-214ENST00000446877 ERVS71-1P61550 626 aa20.74■□□□□ 0.91
PMS1-214ENST00000446877 LRFN4Q6PJG9 635 aa20.74■□□□□ 0.91
PMS1-214ENST00000446877 SLC16A14Q7RTX9 510 aa20.74■□□□□ 0.91
PMS1-214ENST00000446877 OR4K5Q8NGD3 323 aa20.74■□□□□ 0.91
PMS1-214ENST00000446877 ELMOD3Q96FG2 381 aa20.74■□□□□ 0.91
PMS1-214ENST00000446877 SLC25A44Q96H78 314 aaPredicted RBP20.74■□□□□ 0.91
PMS1-214ENST00000446877 EVA1AQ9H8M9 152 aa20.74■□□□□ 0.91
PMS1-214ENST00000446877 RNF13O43567 381 aa20.73■□□□□ 0.91
PMS1-214ENST00000446877 HKR1P10072 659 aa20.73■□□□□ 0.91
PMS1-214ENST00000446877 GLO1Q04760 184 aa20.73■□□□□ 0.91
PMS1-214ENST00000446877 MREGQ8N565 214 aa20.73■□□□□ 0.91
PMS1-214ENST00000446877 CCL17Q92583 94 aa20.73■□□□□ 0.91
PMS1-214ENST00000446877 TCF7L2Q9NQB0 619 aa20.73■□□□□ 0.91
PMS1-214ENST00000446877 CACNG2Q9Y698 323 aa20.73■□□□□ 0.91
PMS1-214ENST00000446877 ISPDA4D126 451 aa20.72■□□□□ 0.91
PMS1-214ENST00000446877 QDPRP09417 244 aa20.72■□□□□ 0.91
PMS1-214ENST00000446877 PPIBP23284 216 aaKnown RBP20.72■□□□□ 0.91
PMS1-214ENST00000446877 SLC6A2P23975 617 aa20.72■□□□□ 0.91
PMS1-214ENST00000446877 ZNF81P51508 661 aa20.72■□□□□ 0.91
PMS1-214ENST00000446877 LCN2P80188 198 aa20.72■□□□□ 0.91
PMS1-214ENST00000446877 SLC3A1Q07837 685 aa20.72■□□□□ 0.91
PMS1-214ENST00000446877 ARMC8Q8IUR7 673 aa20.72■□□□□ 0.91
PMS1-214ENST00000446877 RBM15BQ8NDT2 890 aaKnown RBP20.72■□□□□ 0.91
PMS1-214ENST00000446877 CPEB3Q8NE35 698 aaKnown RBP20.72■□□□□ 0.91
PMS1-214ENST00000446877 ST7LQ8TDW4 575 aa20.72■□□□□ 0.91
PMS1-214ENST00000446877 OR52B2Q96RD2 323 aa20.72■□□□□ 0.91
PMS1-214ENST00000446877 OPN4Q9UHM6 478 aa20.72■□□□□ 0.91
PMS1-214ENST00000446877 TPST2O60704 377 aa20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms