RNA–Protein interactions for RNA: ENST00000445667.6

USE1-202, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene USE1, Length 795 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-202ENST00000445667 TNFRSF13CQ96RJ3 184 aa12.79□□□□□ -0.36
USE1-202ENST00000445667 CCT8L2Q96SF2 557 aa12.79□□□□□ -0.36
USE1-202ENST00000445667 SH3GL3Q99963 347 aa12.79□□□□□ -0.36
USE1-202ENST00000445667 NMNAT1Q9HAN9 279 aaPredicted RBP12.79□□□□□ -0.36
USE1-202ENST00000445667 BARX1Q9HBU1 254 aaPredicted RBP12.79□□□□□ -0.36
USE1-202ENST00000445667 TMEM38BQ9NVV0 291 aa12.79□□□□□ -0.36
USE1-202ENST00000445667 HIF3AQ9Y2N7 669 aa12.79□□□□□ -0.36
USE1-202ENST00000445667 PMF1-BGLAPU3KQ54 211 aa12.79□□□□□ -0.36
USE1-202ENST00000445667 EFCAB9A8MZ26 197 aa12.78□□□□□ -0.36
USE1-202ENST00000445667 hCG_2039718K7EN88 272 aa12.78□□□□□ -0.36
USE1-202ENST00000445667 GMNNO75496 209 aa12.78□□□□□ -0.36
USE1-202ENST00000445667 DIRAS1O95057 198 aa12.78□□□□□ -0.36
USE1-202ENST00000445667 OR8G3PP0DMU2 310 aa12.78□□□□□ -0.36
USE1-202ENST00000445667 ZNF14P17017 642 aaPredicted RBP12.78□□□□□ -0.36
USE1-202ENST00000445667 THBS4P35443 961 aa12.78□□□□□ -0.36
USE1-202ENST00000445667 NUDT6P53370 316 aa12.78□□□□□ -0.36
USE1-202ENST00000445667 CTXN1P60606 82 aa12.78□□□□□ -0.36
USE1-202ENST00000445667 TOP3AQ13472 1001 aaPredicted RBP12.78□□□□□ -0.36
USE1-202ENST00000445667 FHL1Q13642 323 aa12.78□□□□□ -0.36
USE1-202ENST00000445667 RAB39AQ14964 217 aa12.78□□□□□ -0.36
USE1-202ENST00000445667 ADIPOQQ15848 244 aa12.78□□□□□ -0.36
USE1-202ENST00000445667 KRT80Q6KB66 452 aa12.78□□□□□ -0.36
USE1-202ENST00000445667 DNM1P46Q6ZS02 220 aa12.78□□□□□ -0.36
USE1-202ENST00000445667 MBOAT2Q6ZWT7 520 aa12.78□□□□□ -0.36
USE1-202ENST00000445667 CYP4Z1Q86W10 505 aa12.78□□□□□ -0.36
USE1-202ENST00000445667 RNF113BQ8IZP6 322 aaKnown RBP12.78□□□□□ -0.36
USE1-202ENST00000445667 PGAM4Q8N0Y7 254 aa12.78□□□□□ -0.36
USE1-202ENST00000445667 NOXO1Q8NFA2 376 aa12.78□□□□□ -0.36
USE1-202ENST00000445667 NUP37Q8NFH4 326 aa12.78□□□□□ -0.36
USE1-202ENST00000445667 IL17RDQ8NFM7 739 aa12.78□□□□□ -0.36
USE1-202ENST00000445667 NANOS1Q8WY41 292 aaKnown RBP12.78□□□□□ -0.36
USE1-202ENST00000445667 HDAC2Q92769 488 aaKnown RBP12.78□□□□□ -0.36
USE1-202ENST00000445667 C7orf34Q96L11 122 aa12.78□□□□□ -0.36
USE1-202ENST00000445667 SEPHS2Q99611 448 aa12.78□□□□□ -0.36
USE1-202ENST00000445667 REG4Q9BYZ8 158 aa12.78□□□□□ -0.36
USE1-202ENST00000445667 TXNIPQ9H3M7 391 aa12.78□□□□□ -0.36
USE1-202ENST00000445667 NDUFAF4Q9P032 175 aa12.78□□□□□ -0.36
USE1-202ENST00000445667 CD300AQ9UGN4 299 aa12.78□□□□□ -0.36
USE1-202ENST00000445667 ZNF346Q9UL40 294 aaKnown RBP12.78□□□□□ -0.36
USE1-202ENST00000445667 V9GYQ6 96 aa12.78□□□□□ -0.36
USE1-202ENST00000445667 MTORP42345 2549 aa12.78□□□□□ -0.36
USE1-202ENST00000445667 HTR3EA5X5Y0 456 aa12.77□□□□□ -0.37
USE1-202ENST00000445667 FAM171A2A8MVW0 826 aa12.77□□□□□ -0.37
USE1-202ENST00000445667 H7C417 338 aa12.77□□□□□ -0.37
USE1-202ENST00000445667 LY6HO94772 140 aa12.77□□□□□ -0.37
USE1-202ENST00000445667 UBL3O95164 117 aa12.77□□□□□ -0.37
USE1-202ENST00000445667 SLC2A10O95528 541 aa12.77□□□□□ -0.37
USE1-202ENST00000445667 RAB36O95755 333 aa12.77□□□□□ -0.37
USE1-202ENST00000445667 HEXAP06865 529 aa12.77□□□□□ -0.37
USE1-202ENST00000445667 BMP4P12644 408 aa12.77□□□□□ -0.37
USE1-202ENST00000445667 HSD17B1P14061 328 aa12.77□□□□□ -0.37
USE1-202ENST00000445667 GPR4P46093 362 aa12.77□□□□□ -0.37
USE1-202ENST00000445667 MXRA7P84157 204 aa12.77□□□□□ -0.37
USE1-202ENST00000445667 VLDLRP98155 873 aa12.77□□□□□ -0.37
USE1-202ENST00000445667 DAG1Q14118 895 aa12.77□□□□□ -0.37
USE1-202ENST00000445667 PODNL1Q6PEZ8 512 aa12.77□□□□□ -0.37
USE1-202ENST00000445667 RRM2BQ7LG56 351 aa12.77□□□□□ -0.37
USE1-202ENST00000445667 OAFQ86UD1 273 aa12.77□□□□□ -0.37
USE1-202ENST00000445667 CDK20Q8IZL9 346 aa12.77□□□□□ -0.37
USE1-202ENST00000445667 DEFB107AQ8IZN7 70 aa12.77□□□□□ -0.37
USE1-202ENST00000445667 FITM2Q8N6M3 262 aa12.77□□□□□ -0.37
USE1-202ENST00000445667 ANKS4BQ8N8V4 417 aa12.77□□□□□ -0.37
USE1-202ENST00000445667 LRRC75AQ8NAA5 344 aa12.77□□□□□ -0.37
USE1-202ENST00000445667 OR4K5Q8NGD3 323 aa12.77□□□□□ -0.37
USE1-202ENST00000445667 OR13C2Q8NGS9 318 aa12.77□□□□□ -0.37
USE1-202ENST00000445667 SLC7A13Q8TCU3 470 aa12.77□□□□□ -0.37
USE1-202ENST00000445667 GORASP2Q9H8Y8 452 aa12.77□□□□□ -0.37
USE1-202ENST00000445667 SAMD4AQ9UPU9 718 aaKnown RBP12.77□□□□□ -0.37
USE1-202ENST00000445667 FAM32AQ9Y421 112 aaKnown RBP12.77□□□□□ -0.37
USE1-202ENST00000445667 PLCE1Q9P212 2302 aa12.77□□□□□ -0.37
USE1-202ENST00000445667 IGKV1D-43A0A0B4J1Z2 117 aa12.76□□□□□ -0.37
USE1-202ENST00000445667 CENPBD1B2RD01 187 aa12.76□□□□□ -0.37
USE1-202ENST00000445667 CDC42EP2O14613 210 aa12.76□□□□□ -0.37
USE1-202ENST00000445667 FARS2O95363 451 aaKnown RBP12.76□□□□□ -0.37
USE1-202ENST00000445667 H1F0P07305 194 aaKnown RBP12.76□□□□□ -0.37
USE1-202ENST00000445667 ZNF35P13682 527 aa12.76□□□□□ -0.37
USE1-202ENST00000445667 RHCEP18577 417 aa12.76□□□□□ -0.37
USE1-202ENST00000445667 CDAP32320 146 aa12.76□□□□□ -0.37
USE1-202ENST00000445667 ZNF84P51523 738 aa12.76□□□□□ -0.37
USE1-202ENST00000445667 RPL27P61353 136 aaKnown RBP12.76□□□□□ -0.37
USE1-202ENST00000445667 FMODQ06828 376 aa12.76□□□□□ -0.37
USE1-202ENST00000445667 CD47Q08722 323 aa12.76□□□□□ -0.37
USE1-202ENST00000445667 SNTB2Q13425 540 aaKnown RBP12.76□□□□□ -0.37
USE1-202ENST00000445667 FGD3Q5JSP0 725 aa12.76□□□□□ -0.37
USE1-202ENST00000445667 SAMD4BQ5PRF9 694 aaKnown RBP12.76□□□□□ -0.37
USE1-202ENST00000445667 TMPRSS11FQ6ZWK6 438 aa12.76□□□□□ -0.37
USE1-202ENST00000445667 HDDC2Q7Z4H3 204 aa12.76□□□□□ -0.37
USE1-202ENST00000445667 ZNF584Q8IVC4 421 aa12.76□□□□□ -0.37
USE1-202ENST00000445667 LRRC18Q8N456 261 aa12.76□□□□□ -0.37
USE1-202ENST00000445667 ZNF525Q8N782 197 aa12.76□□□□□ -0.37
USE1-202ENST00000445667 CLDN22Q8N7P3 220 aa12.76□□□□□ -0.37
USE1-202ENST00000445667 NSMAFQ92636 917 aa12.76□□□□□ -0.37
USE1-202ENST00000445667 PYURFQ96I23 114 aa12.76□□□□□ -0.37
USE1-202ENST00000445667 TSPAN32Q96QS1 320 aa12.76□□□□□ -0.37
USE1-202ENST00000445667 KCNK17Q96T54 332 aa12.76□□□□□ -0.37
USE1-202ENST00000445667 RHNO1Q9BSD3 238 aa12.76□□□□□ -0.37
USE1-202ENST00000445667 RNF121Q9H920 327 aa12.76□□□□□ -0.37
USE1-202ENST00000445667 IGHV4-30-2A0A087WSY4 118 aa12.75□□□□□ -0.37
USE1-202ENST00000445667 A0A1W2PRQ8 180 aa12.75□□□□□ -0.37
USE1-202ENST00000445667 TMEM129A0AVI4 362 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms