RNA–Protein interactions for RNA: ENST00000442151.6

CD44-211, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 1 (best)

Gene CD44, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-211ENST00000442151 DHHO43323 396 aa6.72□□□□□ -1.33
CD44-211ENST00000442151 ADRA2AP08913 450 aa6.72□□□□□ -1.33
CD44-211ENST00000442151 TACSTD2P09758 323 aa6.72□□□□□ -1.33
CD44-211ENST00000442151 AQP1P29972 269 aa6.72□□□□□ -1.33
CD44-211ENST00000442151 CALCRP30988 508 aa6.72□□□□□ -1.33
CD44-211ENST00000442151 SRP14P37108 136 aaKnown RBP6.72□□□□□ -1.33
CD44-211ENST00000442151 PTDSS1P48651 473 aaKnown RBP6.72□□□□□ -1.33
CD44-211ENST00000442151 BIDP55957 195 aa6.72□□□□□ -1.33
CD44-211ENST00000442151 TAS2R41P59536 307 aa6.72□□□□□ -1.33
CD44-211ENST00000442151 HGFACQ04756 655 aa6.72□□□□□ -1.33
CD44-211ENST00000442151 TBC1D28Q2M2D7 210 aa6.72□□□□□ -1.33
CD44-211ENST00000442151 VMACQ2NL98 169 aa6.72□□□□□ -1.33
CD44-211ENST00000442151 ANKDD1AQ495B1 522 aa6.72□□□□□ -1.33
CD44-211ENST00000442151 ARL9Q6T311 187 aa6.72□□□□□ -1.33
CD44-211ENST00000442151 LINGO2Q7L985 606 aa6.72□□□□□ -1.33
CD44-211ENST00000442151 NANOGNBQ7Z5D8 188 aa6.72□□□□□ -1.33
CD44-211ENST00000442151 MSRB3Q8IXL7 192 aa6.72□□□□□ -1.33
CD44-211ENST00000442151 CDK20Q8IZL9 346 aa6.72□□□□□ -1.33
CD44-211ENST00000442151 SVOPLQ8N434 492 aa6.72□□□□□ -1.33
CD44-211ENST00000442151 SMYD1Q8NB12 490 aa6.72□□□□□ -1.33
CD44-211ENST00000442151 CPEB3Q8NE35 698 aaKnown RBP6.72□□□□□ -1.33
CD44-211ENST00000442151 OR8J3Q8NGG0 315 aa6.72□□□□□ -1.33
CD44-211ENST00000442151 ZBTB9Q96C00 473 aa6.72□□□□□ -1.33
CD44-211ENST00000442151 EBF4Q9BQW3 602 aa6.72□□□□□ -1.33
CD44-211ENST00000442151 WACQ9BTA9 647 aa6.72□□□□□ -1.33
CD44-211ENST00000442151 EMC6Q9BV81 110 aa6.72□□□□□ -1.33
CD44-211ENST00000442151 KRTAP17-1Q9BYP8 105 aa6.72□□□□□ -1.33
CD44-211ENST00000442151 BCL2L14Q9BZR8 327 aa6.72□□□□□ -1.33
CD44-211ENST00000442151 PCDHAC1Q9H158 963 aa6.72□□□□□ -1.33
CD44-211ENST00000442151 KAT8Q9H7Z6 458 aaKnown RBP6.72□□□□□ -1.33
CD44-211ENST00000442151 CHODLQ9H9P2 273 aa6.72□□□□□ -1.33
CD44-211ENST00000442151 SLC52A3Q9NQ40 469 aa6.72□□□□□ -1.33
CD44-211ENST00000442151 SLAMF8Q9P0V8 285 aa6.72□□□□□ -1.33
CD44-211ENST00000442151 A0A0A6YYJ9 748 aa6.71□□□□□ -1.33
CD44-211ENST00000442151 SH3PXD2BA1X283 911 aa6.71□□□□□ -1.33
CD44-211ENST00000442151 C11orf98E9PRG8 122 aa6.71□□□□□ -1.33
CD44-211ENST00000442151 OR5F1O95221 314 aa6.71□□□□□ -1.33
CD44-211ENST00000442151 CH25HO95992 272 aa6.71□□□□□ -1.33
CD44-211ENST00000442151 TFP02787 698 aa6.71□□□□□ -1.33
CD44-211ENST00000442151 ZNF35P13682 527 aa6.71□□□□□ -1.33
CD44-211ENST00000442151 ZNF16P17020 682 aaPredicted RBP6.71□□□□□ -1.33
CD44-211ENST00000442151 DRD4P21917 467 aa6.71□□□□□ -1.33
CD44-211ENST00000442151 ACHEP22303 614 aa6.71□□□□□ -1.33
CD44-211ENST00000442151 APEX1P27695 318 aaKnown RBP6.71□□□□□ -1.33
CD44-211ENST00000442151 APLNRP35414 380 aa6.71□□□□□ -1.33
CD44-211ENST00000442151 LIPAP38571 399 aa6.71□□□□□ -1.33
CD44-211ENST00000442151 TUBA1BP68363 451 aa6.71□□□□□ -1.33
CD44-211ENST00000442151 TUBA4AP68366 448 aa6.71□□□□□ -1.33
CD44-211ENST00000442151 LGALS3BPQ08380 585 aa6.71□□□□□ -1.33
CD44-211ENST00000442151 ZNF74Q16587 644 aa6.71□□□□□ -1.33
CD44-211ENST00000442151 FAM205BPQ63HN1 556 aa6.71□□□□□ -1.33
CD44-211ENST00000442151 KRT80Q6KB66 452 aa6.71□□□□□ -1.33
CD44-211ENST00000442151 RGS7BPQ6MZT1 257 aaPredicted RBP6.71□□□□□ -1.33
CD44-211ENST00000442151 TMEM154Q6P9G4 183 aa6.71□□□□□ -1.33
CD44-211ENST00000442151 TUBA1AQ71U36 451 aa6.71□□□□□ -1.33
CD44-211ENST00000442151 ARPINQ7Z6K5 226 aa6.71□□□□□ -1.33
CD44-211ENST00000442151 ALDH16A1Q8IZ83 802 aa6.71□□□□□ -1.33
CD44-211ENST00000442151 SLC22A24Q8N4F4 322 aa6.71□□□□□ -1.33
CD44-211ENST00000442151 RFLNBQ8N5W9 214 aa6.71□□□□□ -1.33
CD44-211ENST00000442151 OR10A6Q8NH74 314 aa6.71□□□□□ -1.33
CD44-211ENST00000442151 ADAMTS16Q8TE57 1224 aa6.71□□□□□ -1.33
CD44-211ENST00000442151 EDARADDQ8WWZ3 215 aa6.71□□□□□ -1.33
CD44-211ENST00000442151 SGTBQ96EQ0 304 aa6.71□□□□□ -1.33
CD44-211ENST00000442151 RBP7Q96R05 134 aa6.71□□□□□ -1.33
CD44-211ENST00000442151 NELFAQ9H3P2 528 aa6.71□□□□□ -1.33
CD44-211ENST00000442151 NOX3Q9HBY0 568 aa6.71□□□□□ -1.33
CD44-211ENST00000442151 CCNB1IP1Q9NPC3 277 aa6.71□□□□□ -1.33
CD44-211ENST00000442151 TMEFF2Q9UIK5 374 aaPredicted RBP6.71□□□□□ -1.33
CD44-211ENST00000442151 SLC7A7Q9UM01 511 aa6.71□□□□□ -1.33
CD44-211ENST00000442151 MED31Q9Y3C7 131 aa6.71□□□□□ -1.33
CD44-211ENST00000442151 GRIP1Q9Y3R0 1128 aa6.71□□□□□ -1.33
CD44-211ENST00000442151 CADP27708 2225 aa6.71□□□□□ -1.33
CD44-211ENST00000442151 PRR14LQ5THK1 2151 aa6.71□□□□□ -1.34
CD44-211ENST00000442151 A0A0G2JND7 137 aa6.71□□□□□ -1.34
CD44-211ENST00000442151 A0A1W2PPW3 197 aa6.71□□□□□ -1.34
CD44-211ENST00000442151 CPSF4LA6NMK7 179 aaKnown RBP6.71□□□□□ -1.34
CD44-211ENST00000442151 B4DSR2 109 aa6.71□□□□□ -1.34
CD44-211ENST00000442151 PHF1O43189 567 aaPredicted RBP6.71□□□□□ -1.34
CD44-211ENST00000442151 EDF1O60869 148 aaKnown RBP6.71□□□□□ -1.34
CD44-211ENST00000442151 SERPINI2O75830 405 aa6.71□□□□□ -1.34
CD44-211ENST00000442151 HLA-HP01893 362 aa6.71□□□□□ -1.34
CD44-211ENST00000442151 MT-ND1P03886 318 aa6.71□□□□□ -1.34
CD44-211ENST00000442151 QDPRP09417 244 aa6.71□□□□□ -1.34
CD44-211ENST00000442151 ZNF14P17017 642 aaPredicted RBP6.71□□□□□ -1.34
CD44-211ENST00000442151 FUT1P19526 365 aa6.71□□□□□ -1.34
CD44-211ENST00000442151 TUBG1P23258 451 aa6.71□□□□□ -1.34
CD44-211ENST00000442151 GPR6P46095 362 aaPredicted RBP6.71□□□□□ -1.34
CD44-211ENST00000442151 ARFIP2P53365 341 aa6.71□□□□□ -1.34
CD44-211ENST00000442151 DVL1P1P54792 670 aaPredicted RBP6.71□□□□□ -1.34
CD44-211ENST00000442151 PCBD1P61457 104 aa6.71□□□□□ -1.34
CD44-211ENST00000442151 HSF2Q03933 536 aa6.71□□□□□ -1.34
CD44-211ENST00000442151 PIGFQ07326 219 aa6.71□□□□□ -1.34
CD44-211ENST00000442151 SLC3A1Q07837 685 aa6.71□□□□□ -1.34
CD44-211ENST00000442151 ST3GAL3Q11203 375 aa6.71□□□□□ -1.34
CD44-211ENST00000442151 DUSP7Q16829 419 aa6.71□□□□□ -1.34
CD44-211ENST00000442151 NKPD1Q17RQ9 610 aa6.71□□□□□ -1.34
CD44-211ENST00000442151 GLIPR1L2Q4G1C9 344 aa6.71□□□□□ -1.34
CD44-211ENST00000442151 FAM120AOSQ5T036 256 aa6.71□□□□□ -1.34
CD44-211ENST00000442151 SLC16A14Q7RTX9 510 aa6.71□□□□□ -1.34
CD44-211ENST00000442151 GLCCI1Q86VQ1 547 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms