RNA–Protein interactions for RNA: ENST00000441089.1

PTPN4-206, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-206ENST00000441089 ALPLP05186 524 aa4.22□□□□□ -1.73
PTPN4-206ENST00000441089 IGFBP1P08833 259 aaPredicted RBP4.22□□□□□ -1.73
PTPN4-206ENST00000441089 FUT1P19526 365 aa4.22□□□□□ -1.73
PTPN4-206ENST00000441089 MAKP20794 623 aa4.22□□□□□ -1.73
PTPN4-206ENST00000441089 IL11P20809 199 aa4.22□□□□□ -1.73
PTPN4-206ENST00000441089 CRYGSP22914 178 aa4.22□□□□□ -1.73
PTPN4-206ENST00000441089 CTSSP25774 331 aa4.22□□□□□ -1.73
PTPN4-206ENST00000441089 POLR2IP36954 125 aaKnown RBP4.22□□□□□ -1.73
PTPN4-206ENST00000441089 OMPP47874 163 aa4.22□□□□□ -1.73
PTPN4-206ENST00000441089 IDH2P48735 452 aaKnown RBP4.22□□□□□ -1.73
PTPN4-206ENST00000441089 DNASE1L1P49184 302 aa4.22□□□□□ -1.73
PTPN4-206ENST00000441089 ALDH3A2P51648 485 aa4.22□□□□□ -1.73
PTPN4-206ENST00000441089 CCR4P51679 360 aa4.22□□□□□ -1.73
PTPN4-206ENST00000441089 RPS4XP62701 263 aaKnown RBP4.22□□□□□ -1.73
PTPN4-206ENST00000441089 C17orf67Q0P5P2 114 aa4.22□□□□□ -1.73
PTPN4-206ENST00000441089 ST3GAL3Q11203 375 aa4.22□□□□□ -1.73
PTPN4-206ENST00000441089 FOXF1Q12946 379 aa4.22□□□□□ -1.73
PTPN4-206ENST00000441089 SNTA1Q13424 505 aa4.22□□□□□ -1.73
PTPN4-206ENST00000441089 TRAM2Q15035 370 aa4.22□□□□□ -1.73
PTPN4-206ENST00000441089 QPRTQ15274 297 aa4.22□□□□□ -1.73
PTPN4-206ENST00000441089 ZSWIM7Q19AV6 140 aa4.22□□□□□ -1.73
PTPN4-206ENST00000441089 MICAQ29983 383 aa4.22□□□□□ -1.73
PTPN4-206ENST00000441089 PLPPR5Q32ZL2 321 aa4.22□□□□□ -1.73
PTPN4-206ENST00000441089 ZIK1Q3SY52 487 aaPredicted RBP4.22□□□□□ -1.73
PTPN4-206ENST00000441089 FGD3Q5JSP0 725 aa4.22□□□□□ -1.73
PTPN4-206ENST00000441089 FAM120AOSQ5T036 256 aa4.22□□□□□ -1.73
PTPN4-206ENST00000441089 DCST1Q5T197 706 aa4.22□□□□□ -1.73
PTPN4-206ENST00000441089 SLC22A10Q63ZE4 541 aa4.22□□□□□ -1.73
PTPN4-206ENST00000441089 KDM4DQ6B0I6 523 aa4.22□□□□□ -1.73
PTPN4-206ENST00000441089 SLC30A6Q6NXT4 461 aa4.22□□□□□ -1.73
PTPN4-206ENST00000441089 ZNF613Q6PF04 617 aa4.22□□□□□ -1.73
PTPN4-206ENST00000441089 Q6ZSN1 163 aa4.22□□□□□ -1.73
PTPN4-206ENST00000441089 ZER1Q7Z7L7 766 aa4.22□□□□□ -1.73
PTPN4-206ENST00000441089 MISPQ8IVT2 679 aa4.22□□□□□ -1.73
PTPN4-206ENST00000441089 GPALPP1Q8IXQ4 340 aa4.22□□□□□ -1.73
PTPN4-206ENST00000441089 ZNF440Q8IYI8 595 aa4.22□□□□□ -1.73
PTPN4-206ENST00000441089 DND1Q8IYX4 353 aaKnown RBP4.22□□□□□ -1.73
PTPN4-206ENST00000441089 CADM2Q8N3J6 435 aa4.22□□□□□ -1.73
PTPN4-206ENST00000441089 SVOPLQ8N434 492 aa4.22□□□□□ -1.73
PTPN4-206ENST00000441089 GALNT4Q8N4A0 578 aa4.22□□□□□ -1.73
PTPN4-206ENST00000441089 TMEM156Q8N614 296 aa4.22□□□□□ -1.73
PTPN4-206ENST00000441089 TMCO5AQ8N6Q1 288 aa4.22□□□□□ -1.73
PTPN4-206ENST00000441089 NAXEQ8NCW5 288 aa4.22□□□□□ -1.73
PTPN4-206ENST00000441089 PSD4Q8NDX1 1056 aa4.22□□□□□ -1.73
PTPN4-206ENST00000441089 TOR1AIP2Q8NFQ8 470 aa4.22□□□□□ -1.73
PTPN4-206ENST00000441089 OR2M3Q8NG83 312 aa4.22□□□□□ -1.73
PTPN4-206ENST00000441089 OR4K5Q8NGD3 323 aa4.22□□□□□ -1.73
PTPN4-206ENST00000441089 OR5W2Q8NH69 310 aa4.22□□□□□ -1.73
PTPN4-206ENST00000441089 PFN4Q8NHR9 129 aa4.22□□□□□ -1.73
PTPN4-206ENST00000441089 POC1BQ8TC44 478 aa4.22□□□□□ -1.73
PTPN4-206ENST00000441089 MAGEE2Q8TD90 523 aaPredicted RBP4.22□□□□□ -1.73
PTPN4-206ENST00000441089 GIPC3Q8TF64 312 aa4.22□□□□□ -1.73
PTPN4-206ENST00000441089 EME1Q96AY2 570 aa4.22□□□□□ -1.73
PTPN4-206ENST00000441089 NRBF2Q96F24 287 aa4.22□□□□□ -1.73
PTPN4-206ENST00000441089 TMEM41AQ96HV5 264 aa4.22□□□□□ -1.73
PTPN4-206ENST00000441089 TNFRSF13CQ96RJ3 184 aa4.22□□□□□ -1.73
PTPN4-206ENST00000441089 FEVQ99581 238 aa4.22□□□□□ -1.73
PTPN4-206ENST00000441089 RHNO1Q9BSD3 238 aa4.22□□□□□ -1.73
PTPN4-206ENST00000441089 C9orf16Q9BUW7 83 aa4.22□□□□□ -1.73
PTPN4-206ENST00000441089 ZNF426Q9BUY5 554 aa4.22□□□□□ -1.73
PTPN4-206ENST00000441089 FNDC11Q9BVV2 318 aa4.22□□□□□ -1.73
PTPN4-206ENST00000441089 TRIM2Q9C040 744 aa4.22□□□□□ -1.73
PTPN4-206ENST00000441089 KLHL4Q9C0H6 718 aa4.22□□□□□ -1.73
PTPN4-206ENST00000441089 SLCO5A1Q9H2Y9 848 aa4.22□□□□□ -1.73
PTPN4-206ENST00000441089 DSN1Q9H410 356 aa4.22□□□□□ -1.73
PTPN4-206ENST00000441089 ARMC7Q9H6L4 198 aa4.22□□□□□ -1.73
PTPN4-206ENST00000441089 METTL7AQ9H8H3 244 aa4.22□□□□□ -1.73
PTPN4-206ENST00000441089 TMEM27Q9HBJ8 222 aa4.22□□□□□ -1.73
PTPN4-206ENST00000441089 MEPEQ9NQ76 525 aaPredicted RBP4.22□□□□□ -1.73
PTPN4-206ENST00000441089 C20orf141Q9NUB4 165 aa4.22□□□□□ -1.73
PTPN4-206ENST00000441089 MED17Q9NVC6 651 aa4.22□□□□□ -1.73
PTPN4-206ENST00000441089 TAS2R10Q9NYW0 307 aa4.22□□□□□ -1.73
PTPN4-206ENST00000441089 KLRF1Q9NZS2 232 aa4.22□□□□□ -1.73
PTPN4-206ENST00000441089 OSGIN1Q9UJX0 560 aa4.22□□□□□ -1.73
PTPN4-206ENST00000441089 STAB2Q8WWQ8 2551 aa4.21□□□□□ -1.73
PTPN4-206ENST00000441089 A0A087WUJ7 227 aa4.21□□□□□ -1.74
PTPN4-206ENST00000441089 TNFSF12-TNFSF13A0A0A6YY99 330 aa4.21□□□□□ -1.74
PTPN4-206ENST00000441089 TRGV5A0A0B4J1U4 118 aa4.21□□□□□ -1.74
PTPN4-206ENST00000441089 TMEM72A0PK05 275 aa4.21□□□□□ -1.74
PTPN4-206ENST00000441089 TMEM89A2RUT3 159 aa4.21□□□□□ -1.74
PTPN4-206ENST00000441089 ARRDC5A6NEK1 342 aa4.21□□□□□ -1.74
PTPN4-206ENST00000441089 FAM157AC9JC47 383 aa4.21□□□□□ -1.74
PTPN4-206ENST00000441089 KPNA4O00629 521 aaPredicted RBP4.21□□□□□ -1.74
PTPN4-206ENST00000441089 GPRIN2O60269 458 aa4.21□□□□□ -1.74
PTPN4-206ENST00000441089 ZIC3O60481 467 aa4.21□□□□□ -1.74
PTPN4-206ENST00000441089 CLIC3O95833 236 aa4.21□□□□□ -1.74
PTPN4-206ENST00000441089 HPRP00739 348 aa4.21□□□□□ -1.74
PTPN4-206ENST00000441089 LINGO3P0C6S8 592 aa4.21□□□□□ -1.74
PTPN4-206ENST00000441089 RFPL3SP0C7P2 107 aa4.21□□□□□ -1.74
PTPN4-206ENST00000441089 TMIGD3P0DMS9 266 aaPredicted RBP4.21□□□□□ -1.74
PTPN4-206ENST00000441089 THRBP10828 461 aa4.21□□□□□ -1.74
PTPN4-206ENST00000441089 ANXA8P13928 327 aa4.21□□□□□ -1.74
PTPN4-206ENST00000441089 POU2F1P14859 743 aa4.21□□□□□ -1.74
PTPN4-206ENST00000441089 CCNA2P20248 432 aa4.21□□□□□ -1.74
PTPN4-206ENST00000441089 CNR1P21554 472 aa4.21□□□□□ -1.74
PTPN4-206ENST00000441089 TCEA1P23193 301 aaKnown RBP4.21□□□□□ -1.74
PTPN4-206ENST00000441089 IGFBP5P24593 272 aa4.21□□□□□ -1.74
PTPN4-206ENST00000441089 EPHA2P29317 976 aa4.21□□□□□ -1.74
PTPN4-206ENST00000441089 SHC1P29353 583 aa4.21□□□□□ -1.74
PTPN4-206ENST00000441089 TACR3P29371 465 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms