RNA–Protein interactions for RNA: ENST00000439717.2

HSPG2-206, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 637 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-206ENST00000439717 KATNB1Q9BVA0 655 aa10.33□□□□□ -0.76
HSPG2-206ENST00000439717 NRIP3Q9NQ35 241 aa10.33□□□□□ -0.76
HSPG2-206ENST00000439717 CCM2LQ9NUG4 571 aaPredicted RBP10.33□□□□□ -0.76
HSPG2-206ENST00000439717 CRNNQ9UBG3 495 aaPredicted RBP10.33□□□□□ -0.76
HSPG2-206ENST00000439717 GRHPRQ9UBQ7 328 aa10.33□□□□□ -0.76
HSPG2-206ENST00000439717 ST6GALNAC2Q9UJ37 374 aa10.33□□□□□ -0.76
HSPG2-206ENST00000439717 SAMHD1Q9Y3Z3 626 aaKnown RBP10.33□□□□□ -0.76
HSPG2-206ENST00000439717 ABCA12Q86UK0 2595 aa10.33□□□□□ -0.76
HSPG2-206ENST00000439717 PDZD2O15018 2839 aa10.32□□□□□ -0.76
HSPG2-206ENST00000439717 M0R1B8 84 aa10.32□□□□□ -0.76
HSPG2-206ENST00000439717 RAF1P04049 648 aa10.32□□□□□ -0.76
HSPG2-206ENST00000439717 APEHP13798 732 aaKnown RBP10.32□□□□□ -0.76
HSPG2-206ENST00000439717 CBR1P16152 277 aa10.32□□□□□ -0.76
HSPG2-206ENST00000439717 CD40P25942 277 aa10.32□□□□□ -0.76
HSPG2-206ENST00000439717 ERVK-25P63136 954 aa10.32□□□□□ -0.76
HSPG2-206ENST00000439717 MICAQ29983 383 aa10.32□□□□□ -0.76
HSPG2-206ENST00000439717 RFX4Q33E94 735 aa10.32□□□□□ -0.76
HSPG2-206ENST00000439717 C10orf128Q5T292 105 aa10.32□□□□□ -0.76
HSPG2-206ENST00000439717 ZNF770Q6IQ21 691 aaPredicted RBP10.32□□□□□ -0.76
HSPG2-206ENST00000439717 RPL13AP3Q6NVV1 102 aa10.32□□□□□ -0.76
HSPG2-206ENST00000439717 ZNF813Q6ZN06 617 aa10.32□□□□□ -0.76
HSPG2-206ENST00000439717 C20orf204Q6ZNR8 217 aa10.32□□□□□ -0.76
HSPG2-206ENST00000439717 FAM122BQ7Z309 247 aa10.32□□□□□ -0.76
HSPG2-206ENST00000439717 FANK1Q8TC84 345 aa10.32□□□□□ -0.76
HSPG2-206ENST00000439717 NANOS1Q8WY41 292 aaKnown RBP10.32□□□□□ -0.76
HSPG2-206ENST00000439717 NRGNQ92686 78 aa10.32□□□□□ -0.76
HSPG2-206ENST00000439717 NMD3Q96D46 503 aaKnown RBP10.32□□□□□ -0.76
HSPG2-206ENST00000439717 RBP7Q96R05 134 aa10.32□□□□□ -0.76
HSPG2-206ENST00000439717 DENND2DQ9H6A0 471 aaPredicted RBP10.32□□□□□ -0.76
HSPG2-206ENST00000439717 TMEM38BQ9NVV0 291 aa10.32□□□□□ -0.76
HSPG2-206ENST00000439717 HRNRQ86YZ3 2850 aaPredicted RBP10.32□□□□□ -0.76
HSPG2-206ENST00000439717 LRBAP50851 2863 aa10.32□□□□□ -0.76
HSPG2-206ENST00000439717 ARRDC5A6NEK1 342 aa10.31□□□□□ -0.76
HSPG2-206ENST00000439717 XKRYO14609 159 aa10.31□□□□□ -0.76
HSPG2-206ENST00000439717 GNGT2O14610 69 aa10.31□□□□□ -0.76
HSPG2-206ENST00000439717 ABCD4O14678 606 aa10.31□□□□□ -0.76
HSPG2-206ENST00000439717 IMPA2O14732 288 aa10.31□□□□□ -0.76
HSPG2-206ENST00000439717 HS3ST1O14792 307 aa10.31□□□□□ -0.76
HSPG2-206ENST00000439717 ARHGEF9O43307 516 aa10.31□□□□□ -0.76
HSPG2-206ENST00000439717 FKBP6O75344 327 aa10.31□□□□□ -0.76
HSPG2-206ENST00000439717 CIB2O75838 187 aa10.31□□□□□ -0.76
HSPG2-206ENST00000439717 SEC14L2O76054 403 aa10.31□□□□□ -0.76
HSPG2-206ENST00000439717 FARS2O95363 451 aaKnown RBP10.31□□□□□ -0.76
HSPG2-206ENST00000439717 TXNDC12O95881 172 aa10.31□□□□□ -0.76
HSPG2-206ENST00000439717 PLAUP00749 431 aa10.31□□□□□ -0.76
HSPG2-206ENST00000439717 GASTP01350 101 aa10.31□□□□□ -0.76
HSPG2-206ENST00000439717 IGKV3-15P01624 115 aa10.31□□□□□ -0.76
HSPG2-206ENST00000439717 IGLV1-44P01699 117 aa10.31□□□□□ -0.76
HSPG2-206ENST00000439717 OR8G3PP0DMU2 310 aa10.31□□□□□ -0.76
HSPG2-206ENST00000439717 B4GALT1P15291 398 aa10.31□□□□□ -0.76
HSPG2-206ENST00000439717 NPR2P20594 1047 aa10.31□□□□□ -0.76
HSPG2-206ENST00000439717 DNASE1P24855 282 aa10.31□□□□□ -0.76
HSPG2-206ENST00000439717 SDHAP31040 664 aa10.31□□□□□ -0.76
HSPG2-206ENST00000439717 SLC6A6P31641 620 aa10.31□□□□□ -0.76
HSPG2-206ENST00000439717 ARR3P36575 388 aa10.31□□□□□ -0.76
HSPG2-206ENST00000439717 RPS6KA3P51812 740 aa10.31□□□□□ -0.76
HSPG2-206ENST00000439717 FXYD6P3P58550 94 aa10.31□□□□□ -0.76
HSPG2-206ENST00000439717 CD47Q08722 323 aa10.31□□□□□ -0.76
HSPG2-206ENST00000439717 ZNF672Q499Z4 452 aaPredicted RBP10.31□□□□□ -0.76
HSPG2-206ENST00000439717 C1orf146Q5VVC0 180 aa10.31□□□□□ -0.76
HSPG2-206ENST00000439717 SLC25A47Q6Q0C1 308 aa10.31□□□□□ -0.76
HSPG2-206ENST00000439717 THSD4Q6ZMP0 1018 aa10.31□□□□□ -0.76
HSPG2-206ENST00000439717 ZNF620Q6ZNG0 422 aa10.31□□□□□ -0.76
HSPG2-206ENST00000439717 DPPA2Q7Z7J5 298 aa10.31□□□□□ -0.76
HSPG2-206ENST00000439717 DEPDC4Q8N2C3 294 aa10.31□□□□□ -0.76
HSPG2-206ENST00000439717 SLC22A24Q8N4F4 322 aa10.31□□□□□ -0.76
HSPG2-206ENST00000439717 AQP11Q8NBQ7 271 aa10.31□□□□□ -0.76
HSPG2-206ENST00000439717 OR9Q2Q8NGE9 314 aa10.31□□□□□ -0.76
HSPG2-206ENST00000439717 AKAP1Q92667 903 aaKnown RBP eCLIP10.31□□□□□ -0.76
HSPG2-206ENST00000439717 Q96M85 177 aa10.31□□□□□ -0.76
HSPG2-206ENST00000439717 ZNF570Q96NI8 536 aa10.31□□□□□ -0.76
HSPG2-206ENST00000439717 SLC38A2Q96QD8 506 aa10.31□□□□□ -0.76
HSPG2-206ENST00000439717 C1QTNF6Q9BXI9 259 aa10.31□□□□□ -0.76
HSPG2-206ENST00000439717 DGCR6LQ9BY27 220 aa10.31□□□□□ -0.76
HSPG2-206ENST00000439717 OR52D1Q9H346 318 aa10.31□□□□□ -0.76
HSPG2-206ENST00000439717 LIME1Q9H400 295 aa10.31□□□□□ -0.76
HSPG2-206ENST00000439717 UBTD1Q9HAC8 227 aa10.31□□□□□ -0.76
HSPG2-206ENST00000439717 VNN3Q9NY84 501 aa10.31□□□□□ -0.76
HSPG2-206ENST00000439717 B3GNT2Q9NY97 397 aa10.31□□□□□ -0.76
HSPG2-206ENST00000439717 DNAJB9Q9UBS3 223 aa10.31□□□□□ -0.76
HSPG2-206ENST00000439717 ADAM18Q9Y3Q7 739 aa10.31□□□□□ -0.76
HSPG2-206ENST00000439717 U3KQV3 271 aa10.31□□□□□ -0.76
HSPG2-206ENST00000439717 IGHV1-18A0A0C4DH31 117 aa10.3□□□□□ -0.76
HSPG2-206ENST00000439717 SHISA9B4DS77 424 aa10.3□□□□□ -0.76
HSPG2-206ENST00000439717 ARPC3O15145 178 aa10.3□□□□□ -0.76
HSPG2-206ENST00000439717 IDH3BO43837 385 aa10.3□□□□□ -0.76
HSPG2-206ENST00000439717 UBL3O95164 117 aa10.3□□□□□ -0.76
HSPG2-206ENST00000439717 ATE1O95260 518 aa10.3□□□□□ -0.76
HSPG2-206ENST00000439717 GSTM3P21266 225 aa10.3□□□□□ -0.76
HSPG2-206ENST00000439717 CAPZA2P47755 286 aa10.3□□□□□ -0.76
HSPG2-206ENST00000439717 TUBA1BP68363 451 aa10.3□□□□□ -0.76
HSPG2-206ENST00000439717 TUBA4AP68366 448 aa10.3□□□□□ -0.76
HSPG2-206ENST00000439717 MRPS34P82930 218 aaKnown RBP10.3□□□□□ -0.76
HSPG2-206ENST00000439717 MYBPC1Q00872 1141 aa10.3□□□□□ -0.76
HSPG2-206ENST00000439717 COX10Q12887 443 aa10.3□□□□□ -0.76
HSPG2-206ENST00000439717 PPP1R8Q12972 351 aaKnown RBP10.3□□□□□ -0.76
HSPG2-206ENST00000439717 KRR1Q13601 381 aaKnown RBP10.3□□□□□ -0.76
HSPG2-206ENST00000439717 KEAP1Q14145 624 aa10.3□□□□□ -0.76
HSPG2-206ENST00000439717 GSG1Q2KHT4 349 aa10.3□□□□□ -0.76
HSPG2-206ENST00000439717 MESTQ5EB52 335 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms