RNA–Protein interactions for RNA: ENST00000439235.5

CHD3-204, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,263 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-204ENST00000439235 APH1AQ96BI3 265 aa18.34■□□□□ 0.53
CHD3-204ENST00000439235 TTYH2Q9BSA4 534 aa18.34■□□□□ 0.53
CHD3-204ENST00000439235 LINC00470Q9BZP3 86 aa18.34■□□□□ 0.53
CHD3-204ENST00000439235 NUAK2Q9H093 628 aa18.34■□□□□ 0.53
CHD3-204ENST00000439235 RACGAP1Q9H0H5 632 aa18.34■□□□□ 0.53
CHD3-204ENST00000439235 FOXD3Q9UJU5 478 aaPredicted RBP18.34■□□□□ 0.53
CHD3-204ENST00000439235 BLOC1S6Q9UL45 172 aa18.34■□□□□ 0.53
CHD3-204ENST00000439235 MOKQ9UQ07 419 aa18.34■□□□□ 0.53
CHD3-204ENST00000439235 RPL36Q9Y3U8 105 aaKnown RBP18.34■□□□□ 0.53
CHD3-204ENST00000439235 SLC1A7O00341 560 aa18.33■□□□□ 0.52
CHD3-204ENST00000439235 SLC16A7O60669 478 aa18.33■□□□□ 0.52
CHD3-204ENST00000439235 FAM20BO75063 409 aa18.33■□□□□ 0.52
CHD3-204ENST00000439235 KHDRBS3O75525 346 aaKnown RBP18.33■□□□□ 0.52
CHD3-204ENST00000439235 CCDC159P0C7I6 412 aa18.33■□□□□ 0.52
CHD3-204ENST00000439235 TMIGD3P0DMS9 266 aaPredicted RBP18.33■□□□□ 0.52
CHD3-204ENST00000439235 HTR1FP30939 366 aa18.33■□□□□ 0.52
CHD3-204ENST00000439235 CENPAP49450 140 aa18.33■□□□□ 0.52
CHD3-204ENST00000439235 SIRPAP78324 504 aa18.33■□□□□ 0.52
CHD3-204ENST00000439235 APOFQ13790 326 aa18.33■□□□□ 0.52
CHD3-204ENST00000439235 SMN1Q16637 294 aaKnown RBP18.33■□□□□ 0.52
CHD3-204ENST00000439235 LAIR2Q6ISS4 152 aa18.33■□□□□ 0.52
CHD3-204ENST00000439235 C3P1Q6ZMU1 363 aa18.33■□□□□ 0.52
CHD3-204ENST00000439235 MEPCEQ7L2J0 689 aaKnown RBP18.33■□□□□ 0.52
CHD3-204ENST00000439235 ZBTB46Q86UZ6 589 aa18.33■□□□□ 0.52
CHD3-204ENST00000439235 GPR137CQ8N3F9 429 aa18.33■□□□□ 0.52
CHD3-204ENST00000439235 POMGNT2Q8NAT1 580 aa18.33■□□□□ 0.52
CHD3-204ENST00000439235 BPIFB6Q8NFQ5 453 aa18.33■□□□□ 0.52
CHD3-204ENST00000439235 OR6K3Q8NGY3 331 aa18.33■□□□□ 0.52
CHD3-204ENST00000439235 NMD3Q96D46 503 aaKnown RBP18.33■□□□□ 0.52
CHD3-204ENST00000439235 YTHDF1Q9BYJ9 559 aaKnown RBP18.33■□□□□ 0.52
CHD3-204ENST00000439235 ULBP2Q9BZM5 246 aa18.33■□□□□ 0.52
CHD3-204ENST00000439235 SLCO5A1Q9H2Y9 848 aa18.33■□□□□ 0.52
CHD3-204ENST00000439235 RERGLQ9H628 205 aa18.33■□□□□ 0.52
CHD3-204ENST00000439235 SRA1Q9HD15 236 aaKnown RBP18.33■□□□□ 0.52
CHD3-204ENST00000439235 PLCXD1Q9NUJ7 323 aa18.33■□□□□ 0.52
CHD3-204ENST00000439235 SCN3BQ9NY72 215 aa18.33■□□□□ 0.52
CHD3-204ENST00000439235 WARS2Q9UGM6 360 aaKnown RBP18.33■□□□□ 0.52
CHD3-204ENST00000439235 SH3BGRL2Q9UJC5 107 aa18.33■□□□□ 0.52
CHD3-204ENST00000439235 B9D1Q9UPM9 204 aa18.33■□□□□ 0.52
CHD3-204ENST00000439235 PCDHGB5Q9Y5G0 923 aa18.33■□□□□ 0.52
CHD3-204ENST00000439235 TRGV8A0A0C4DH27 118 aa18.32■□□□□ 0.52
CHD3-204ENST00000439235 GYPBP06028 91 aa18.32■□□□□ 0.52
CHD3-204ENST00000439235 GLI4P10075 376 aa18.32■□□□□ 0.52
CHD3-204ENST00000439235 CLUP10909 449 aa18.32■□□□□ 0.52
CHD3-204ENST00000439235 CTLA4P16410 223 aa18.32■□□□□ 0.52
CHD3-204ENST00000439235 SLC2A5P22732 501 aa18.32■□□□□ 0.52
CHD3-204ENST00000439235 NTF4P34130 210 aa18.32■□□□□ 0.52
CHD3-204ENST00000439235 CHN2P52757 468 aa18.32■□□□□ 0.52
CHD3-204ENST00000439235 BLVRAP53004 296 aa18.32■□□□□ 0.52
CHD3-204ENST00000439235 NUDT6P53370 316 aa18.32■□□□□ 0.52
CHD3-204ENST00000439235 ZNF91Q05481 1191 aa18.32■□□□□ 0.52
CHD3-204ENST00000439235 FMODQ06828 376 aa18.32■□□□□ 0.52
CHD3-204ENST00000439235 RIPPLY2Q5TAB7 128 aa18.32■□□□□ 0.52
CHD3-204ENST00000439235 TMEM211Q6ICI0 200 aa18.32■□□□□ 0.52
CHD3-204ENST00000439235 UGT2A3Q6UWM9 527 aa18.32■□□□□ 0.52
CHD3-204ENST00000439235 NUFIP2Q7Z417 695 aaKnown RBP18.32■□□□□ 0.52
CHD3-204ENST00000439235 OR6V1Q8N148 313 aa18.32■□□□□ 0.52
CHD3-204ENST00000439235 RPRMLQ8N4K4 120 aa18.32■□□□□ 0.52
CHD3-204ENST00000439235 CNEP1R1Q8N9A8 125 aa18.32■□□□□ 0.52
CHD3-204ENST00000439235 MCHR2Q969V1 340 aa18.32■□□□□ 0.52
CHD3-204ENST00000439235 TSSK2Q96PF2 358 aa18.32■□□□□ 0.52
CHD3-204ENST00000439235 NR1H4Q96RI1 486 aaPredicted RBP18.32■□□□□ 0.52
CHD3-204ENST00000439235 TPRKBQ9Y3C4 175 aa18.32■□□□□ 0.52
CHD3-204ENST00000439235 PIEZO2Q9H5I5 2752 aa18.32■□□□□ 0.52
CHD3-204ENST00000439235 IGLV1-36A0A0B4J1U3 117 aa18.31■□□□□ 0.52
CHD3-204ENST00000439235 CCDC182A6NF36 153 aa18.31■□□□□ 0.52
CHD3-204ENST00000439235 E9PLN8 166 aa18.31■□□□□ 0.52
CHD3-204ENST00000439235 KRT33AO76009 404 aa18.31■□□□□ 0.52
CHD3-204ENST00000439235 GLCEO94923 617 aa18.31■□□□□ 0.52
CHD3-204ENST00000439235 QDPRP09417 244 aa18.31■□□□□ 0.52
CHD3-204ENST00000439235 CEACAM8P31997 349 aaPredicted RBP18.31■□□□□ 0.52
CHD3-204ENST00000439235 CA7P43166 264 aa18.31■□□□□ 0.52
CHD3-204ENST00000439235 OR3A2P47893 321 aa18.31■□□□□ 0.52
CHD3-204ENST00000439235 ZNF133P52736 654 aaPredicted RBP18.31■□□□□ 0.52
CHD3-204ENST00000439235 SLC25A47Q6Q0C1 308 aa18.31■□□□□ 0.52
CHD3-204ENST00000439235 OR6K6Q8NGW6 343 aa18.31■□□□□ 0.52
CHD3-204ENST00000439235 VKORC1Q9BQB6 163 aa18.31■□□□□ 0.52
CHD3-204ENST00000439235 C12orf49Q9H741 205 aa18.31■□□□□ 0.52
CHD3-204ENST00000439235 MYRFQ9Y2G1 1151 aa18.31■□□□□ 0.52
CHD3-204ENST00000439235 ATMQ13315 3056 aa18.31■□□□□ 0.52
CHD3-204ENST00000439235 TLN1Q9Y490 2541 aaKnown RBP18.3■□□□□ 0.52
CHD3-204ENST00000439235 SETXQ7Z333 2677 aaKnown RBP18.3■□□□□ 0.52
CHD3-204ENST00000439235 ITPR1Q14643 2758 aa18.3■□□□□ 0.52
CHD3-204ENST00000439235 IRGMA1A4Y4 181 aa18.3■□□□□ 0.52
CHD3-204ENST00000439235 DCTN6O00399 190 aa18.3■□□□□ 0.52
CHD3-204ENST00000439235 UPK3AO75631 287 aa18.3■□□□□ 0.52
CHD3-204ENST00000439235 TOXO94900 526 aa18.3■□□□□ 0.52
CHD3-204ENST00000439235 TNFAIP8O95379 198 aa18.3■□□□□ 0.52
CHD3-204ENST00000439235 DBTP11182 482 aaKnown RBP18.3■□□□□ 0.52
CHD3-204ENST00000439235 PYCR1P32322 319 aa18.3■□□□□ 0.52
CHD3-204ENST00000439235 KIR2DL2P43627 348 aaPredicted RBP18.3■□□□□ 0.52
CHD3-204ENST00000439235 MTNR1AP48039 350 aa18.3■□□□□ 0.52
CHD3-204ENST00000439235 ZNF84P51523 738 aa18.3■□□□□ 0.52
CHD3-204ENST00000439235 GLO1Q04760 184 aa18.3■□□□□ 0.52
CHD3-204ENST00000439235 POU4F2Q12837 409 aa18.3■□□□□ 0.52
CHD3-204ENST00000439235 C10orf128Q5T292 105 aa18.3■□□□□ 0.52
CHD3-204ENST00000439235 TSPO2Q5TGU0 170 aa18.3■□□□□ 0.52
CHD3-204ENST00000439235 ABHD12BQ7Z5M8 362 aaPredicted RBP18.3■□□□□ 0.52
CHD3-204ENST00000439235 ALKBH3Q96Q83 286 aaPredicted RBP18.3■□□□□ 0.52
CHD3-204ENST00000439235 TEAD3Q99594 435 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms